-
1
-
-
54049146208
-
Quantitative microscopy and systems biology: seeing the whole picture
-
10.1007/s00418-008-0517-5, 18830616
-
Verveer P, Bastiaens P. Quantitative microscopy and systems biology: seeing the whole picture. Histochemistry and cell biology 2008, 130(5):833-843. 10.1007/s00418-008-0517-5, 18830616.
-
(2008)
Histochemistry and cell biology
, vol.130
, Issue.5
, pp. 833-843
-
-
Verveer, P.1
Bastiaens, P.2
-
2
-
-
34548281030
-
Imaging in systems biology
-
10.1016/j.cell.2007.08.031, 17803903
-
Megason S, Fraser S. Imaging in systems biology. Cell 2007, 130(5):784-795. 10.1016/j.cell.2007.08.031, 17803903.
-
(2007)
Cell
, vol.130
, Issue.5
, pp. 784-795
-
-
Megason, S.1
Fraser, S.2
-
4
-
-
33745095977
-
Fanciful FRET
-
10.1126/stke.3312006re2, 16622184
-
Vogel SS, Thaler C, Koushik SV. Fanciful FRET. Sci STKE 2006, 2006:re2. 10.1126/stke.3312006re2, 16622184.
-
(2006)
Sci STKE
, vol.2006
-
-
Vogel, S.S.1
Thaler, C.2
Koushik, S.V.3
-
5
-
-
34548417621
-
Fluorescent protein FRET: the good, the bad and the ugly
-
10.1016/j.tibs.2007.08.003, 17764955
-
Piston DW, Kremers GJ. Fluorescent protein FRET: the good, the bad and the ugly. Trends Biochem Sci 2007, 32:407-14. 10.1016/j.tibs.2007.08.003, 17764955.
-
(2007)
Trends Biochem Sci
, vol.32
, pp. 407-414
-
-
Piston, D.W.1
Kremers, G.J.2
-
6
-
-
61349113011
-
Quantitative FRET microscopy of live cells
-
Heidelberg: Springer, Shorte SL, Frischknecht F
-
Hoppe A. Quantitative FRET microscopy of live cells. Imaging Cellular and Molecular Biological Functions 2007, 157-180. Heidelberg: Springer, Shorte SL, Frischknecht F.
-
(2007)
Imaging Cellular and Molecular Biological Functions
, pp. 157-180
-
-
Hoppe, A.1
-
7
-
-
0031956092
-
Quantitative fluorescence resonance energy transfer measurements using fluorescence microscopy
-
10.1016/S0006-3495(98)77976-7, 1299610, 9591694
-
Gordon G, Berry G, Liang X, Levine B. Quantitative fluorescence resonance energy transfer measurements using fluorescence microscopy. Biophysical Journal 1998, 74:2702-2713. 10.1016/S0006-3495(98)77976-7, 1299610, 9591694.
-
(1998)
Biophysical Journal
, vol.74
, pp. 2702-2713
-
-
Gordon, G.1
Berry, G.2
Liang, X.3
Levine, B.4
-
8
-
-
0035910511
-
Stable SNARE complex prior to evoked synaptic vesicle fusion revealed by fluorescence resonance energy transfer
-
Xia Z, Zhou Q, Lin J, Liu Y. Stable SNARE complex prior to evoked synaptic vesicle fusion revealed by fluorescence resonance energy transfer. J Biol Chem 2001, 276:1766-71.
-
(2001)
J Biol Chem
, vol.276
, pp. 1766-1771
-
-
Xia, Z.1
Zhou, Q.2
Lin, J.3
Liu, Y.4
-
9
-
-
0344447088
-
Intensity-based energy transfer measurements in digital imaging microscopy
-
10.1007/s002490050145, 9691467
-
Nagy P, Vámosi G, Bodnár A, Lockett SJ, Szöllösi J. Intensity-based energy transfer measurements in digital imaging microscopy. Eur Biophys J 1998, 27:377-89. 10.1007/s002490050145, 9691467.
-
(1998)
Eur Biophys J
, vol.27
, pp. 377-389
-
-
Nagy, P.1
Vámosi, G.2
Bodnár, A.3
Lockett, S.J.4
Szöllösi, J.5
-
10
-
-
12244312784
-
Characterization of one- and two-photon excitation fluorescence resonance energy transfer microscopy
-
10.1016/S1046-2023(02)00283-9, 12543072
-
Elangovan M, Wallrabe H, Chen Y, Day RN, Barroso M, Periasamy A. Characterization of one- and two-photon excitation fluorescence resonance energy transfer microscopy. Methods 2003, 29:58-73. 10.1016/S1046-2023(02)00283-9, 12543072.
-
(2003)
Methods
, vol.29
, pp. 58-73
-
-
Elangovan, M.1
Wallrabe, H.2
Chen, Y.3
Day, R.N.4
Barroso, M.5
Periasamy, A.6
-
11
-
-
0021273333
-
Flow cytometric measurement of fluorescence resonance energy transfer on cell surfaces. Quantitative evaluation of the transfer efficiency on a cell-by-cell basis
-
10.1016/S0006-3495(84)84240-X, 1434982, 6428482
-
Trón L, Szöllósi J, Damjanovich S, Helliwell SH, Arndt-Jovin DJ, Jovin TM. Flow cytometric measurement of fluorescence resonance energy transfer on cell surfaces. Quantitative evaluation of the transfer efficiency on a cell-by-cell basis. Biophysical Journal 1984, 45:939-46. 10.1016/S0006-3495(84)84240-X, 1434982, 6428482.
-
(1984)
Biophysical Journal
, vol.45
, pp. 939-946
-
-
Trón, L.1
Szöllósi, J.2
Damjanovich, S.3
Helliwell, S.H.4
Arndt-Jovin, D.J.5
Jovin, T.M.6
-
12
-
-
0002557253
-
Calibration of fluorescence resonance energy transfer in microscopy using genetically engineered GFP derivatives on nickel chelating beads
-
Youvan D, Silva C, Bylina E, Coleman W, Dilworth M, Yang M. Calibration of fluorescence resonance energy transfer in microscopy using genetically engineered GFP derivatives on nickel chelating beads. Biotechnology et alia 1997, 3:1-18.
-
(1997)
Biotechnology et alia
, vol.3
, pp. 1-18
-
-
Youvan, D.1
Silva, C.2
Bylina, E.3
Coleman, W.4
Dilworth, M.5
Yang, M.6
-
13
-
-
0038101519
-
FRET or no FRET: a quantitative comparison
-
10.1016/S0006-3495(03)75126-1, 1302980, 12770904
-
Berney C, Danuser G. FRET or no FRET: a quantitative comparison. Biophysical Journal 2003, 84:3992-4010. 10.1016/S0006-3495(03)75126-1, 1302980, 12770904.
-
(2003)
Biophysical Journal
, vol.84
, pp. 3992-4010
-
-
Berney, C.1
Danuser, G.2
-
14
-
-
2942640371
-
Photobleaching-corrected FRET efficiency imaging of live cells
-
10.1529/biophysj.103.022087, 1304294, 15189889
-
Zal T, Gascoigne NRJ. Photobleaching-corrected FRET efficiency imaging of live cells. Biophysical Journal 2004, 86:3923-39. 10.1529/biophysj.103.022087, 1304294, 15189889.
-
(2004)
Biophysical Journal
, vol.86
, pp. 3923-3939
-
-
Zal, T.1
Gascoigne, N.R.J.2
-
15
-
-
0036924067
-
Fluorescence resonance energy transfer-based stoichiometry in living cells
-
10.1016/S0006-3495(02)75365-4, 1302440, 12496132
-
Hoppe A, Christensen K, Swanson JA. Fluorescence resonance energy transfer-based stoichiometry in living cells. Biophysical Journal 2002, 83(6):3652-64. 10.1016/S0006-3495(02)75365-4, 1302440, 12496132.
-
(2002)
Biophysical Journal
, vol.83
, Issue.6
, pp. 3652-3664
-
-
Hoppe, A.1
Christensen, K.2
Swanson, J.A.3
-
16
-
-
0035959942
-
Preassociation of calmodulin with voltage-gated Ca(2+) channels revealed by FRET in single living cells
-
10.1016/S0896-6273(01)00438-X, 11580897
-
Erickson MG, Alseikhan BA, Peterson BZ, Yue DT. Preassociation of calmodulin with voltage-gated Ca(2+) channels revealed by FRET in single living cells. Neuron 2001, 31(6):973-85. 10.1016/S0896-6273(01)00438-X, 11580897.
-
(2001)
Neuron
, vol.31
, Issue.6
, pp. 973-985
-
-
Erickson, M.G.1
Alseikhan, B.A.2
Peterson, B.Z.3
Yue, D.T.4
-
17
-
-
33748459957
-
Measurement of FRET efficiency and ratio of donor to acceptor concentration in living cells
-
10.1529/biophysj.106.088773, 1544280, 16815904
-
Chen H, Puhl H, Koushik S, Vogel S, Ikeda S. Measurement of FRET efficiency and ratio of donor to acceptor concentration in living cells. Biophysical Journal 2006, 91:L39-41. 10.1529/biophysj.106.088773, 1544280, 16815904.
-
(2006)
Biophysical Journal
, vol.91
-
-
Chen, H.1
Puhl, H.2
Koushik, S.3
Vogel, S.4
Ikeda, S.5
-
18
-
-
80052974526
-
A quantitative protocol for dynamic measurements of protein interactions by FRET-sensitized fluorescence emission
-
Elder A, Domin A, Schierle GK, Lindon C, Pines J, Esposito A, Kaminski C. A quantitative protocol for dynamic measurements of protein interactions by FRET-sensitized fluorescence emission. Royal Society Interface 2009, 6:1-24.
-
(2009)
Royal Society Interface
, vol.6
, pp. 1-24
-
-
Elder, A.1
Domin, A.2
Schierle, G.K.3
Lindon, C.4
Pines, J.5
Esposito, A.6
Kaminski, C.7
-
19
-
-
38549181839
-
Analysis of FRET signals in the presence of free donors and acceptors
-
10.1529/biophysj.107.111773, 2186232, 17921223
-
Wlodarczyk J, Woehler A, Kobe F, Ponimaskin E, Zeug A, Neher E. Analysis of FRET signals in the presence of free donors and acceptors. Biophysical Journal 2008, 94:986-1000. 10.1529/biophysj.107.111773, 2186232, 17921223.
-
(2008)
Biophysical Journal
, vol.94
, pp. 986-1000
-
-
Wlodarczyk, J.1
Woehler, A.2
Kobe, F.3
Ponimaskin, E.4
Zeug, A.5
Neher, E.6
-
21
-
-
38449119038
-
Estimating protein-protein interaction affinity in living cells using quantitative Förster resonance energy transfer measurements
-
10.1117/1.2799171, 17994899
-
Chen H, III HP, Ikeda S. Estimating protein-protein interaction affinity in living cells using quantitative Förster resonance energy transfer measurements. Journal of Biomedical Optics 2007, 12:054011. 10.1117/1.2799171, 17994899.
-
(2007)
Journal of Biomedical Optics
, vol.12
, pp. 054011
-
-
Chen, H.1
III, H.P.2
Ikeda, S.3
-
22
-
-
33846017352
-
The nature of systems biology
-
10.1016/j.tim.2006.11.003, 17113776
-
Bruggeman F, Westerhoff H. The nature of systems biology. TRENDS in Microbiology 2007, 15:45-50. 10.1016/j.tim.2006.11.003, 17113776.
-
(2007)
TRENDS in Microbiology
, vol.15
, pp. 45-50
-
-
Bruggeman, F.1
Westerhoff, H.2
-
23
-
-
13844277017
-
New methodologies for measuring protein interactions in vivo and in vitro
-
10.1016/j.sbi.2005.01.008, 15718127
-
Piehler J. New methodologies for measuring protein interactions in vivo and in vitro. Curr Opin Struct Biol 2005, 15:4-14. 10.1016/j.sbi.2005.01.008, 15718127.
-
(2005)
Curr Opin Struct Biol
, vol.15
, pp. 4-14
-
-
Piehler, J.1
-
24
-
-
58849137994
-
Systems biology: experimental design
-
10.1111/j.1742-4658.2008.06843.x, 19215298
-
Kreutz C, Timmer J. Systems biology: experimental design. FEBS Journal 2009, 276(4):923-942. 10.1111/j.1742-4658.2008.06843.x, 19215298.
-
(2009)
FEBS Journal
, vol.276
, Issue.4
, pp. 923-942
-
-
Kreutz, C.1
Timmer, J.2
-
25
-
-
4344564695
-
Applying spectral fingerprinting to the analysis of FRET images
-
10.1002/jemt.20078, 15352090
-
Neher RA, Neher E. Applying spectral fingerprinting to the analysis of FRET images. Microsc Res Tech 2004, 64:185-95. 10.1002/jemt.20078, 15352090.
-
(2004)
Microsc Res Tech
, vol.64
, pp. 185-195
-
-
Neher, R.A.1
Neher, E.2
-
26
-
-
74549174645
-
Introduction to the Quantitative Analysis of Two-Dimensional Fluorescence Microscopy Images for Cell-Based Screening
-
10.1371/journal.pcbi.1000603, 2791844, 20041172
-
Ljosa V, Carpenter AE. Introduction to the Quantitative Analysis of Two-Dimensional Fluorescence Microscopy Images for Cell-Based Screening. PLoS Comput Biol 2009, 5(12):e1000603. 10.1371/journal.pcbi.1000603, 2791844, 20041172.
-
(2009)
PLoS Comput Biol
, vol.5
, Issue.12
-
-
Ljosa, V.1
Carpenter, A.E.2
-
27
-
-
58549110252
-
Stochastic modelling for quantitative description of heterogeneous biological systems
-
10.1038/nrg2509, 19139763
-
Wilkinson D. Stochastic modelling for quantitative description of heterogeneous biological systems. Nat Rev Genet 2009, 10(2):122-133. 10.1038/nrg2509, 19139763.
-
(2009)
Nat Rev Genet
, vol.10
, Issue.2
, pp. 122-133
-
-
Wilkinson, D.1
-
29
-
-
13844297577
-
Imaging protein molecules using FRET and FLIM microscopy
-
10.1016/j.copbio.2004.12.002, 15722011
-
Wallrabe H, Periasamy A. Imaging protein molecules using FRET and FLIM microscopy. Current Opinion in Biotechnology 2005, 16:19-27. 10.1016/j.copbio.2004.12.002, 15722011.
-
(2005)
Current Opinion in Biotechnology
, vol.16
, pp. 19-27
-
-
Wallrabe, H.1
Periasamy, A.2
-
30
-
-
33745714379
-
A fluctuation method to quantify in vivo fluorescence data
-
10.1529/biophysj.105.073098, 1483091, 16648159
-
Rosenfeld N, Perkins TJ, Alon U, Elowitz MB, Swain PS. A fluctuation method to quantify in vivo fluorescence data. Biophysical Journal 2006, 91(2):759-66. 10.1529/biophysj.105.073098, 1483091, 16648159.
-
(2006)
Biophysical Journal
, vol.91
, Issue.2
, pp. 759-766
-
-
Rosenfeld, N.1
Perkins, T.J.2
Alon, U.3
Elowitz, M.B.4
Swain, P.S.5
-
31
-
-
44049105523
-
Mapping the number of molecules and brightness in the laser scanning microscope
-
10.1529/biophysj.107.114645, 2257897, 18096627
-
Digman MA, Dalal RB, Horwitz AF, Gratton E. Mapping the number of molecules and brightness in the laser scanning microscope. Biophysical Journal 2008, 94(6):2320-2332. 10.1529/biophysj.107.114645, 2257897, 18096627.
-
(2008)
Biophysical Journal
, vol.94
, Issue.6
, pp. 2320-2332
-
-
Digman, M.A.1
Dalal, R.B.2
Horwitz, A.F.3
Gratton, E.4
-
32
-
-
5744249209
-
Equation of state calculations by fast computing machines
-
Metropolis N, Rosenbluth A, Rosenbluth M, Teller A, Teller E. Equation of state calculations by fast computing machines. J Chem Phys 1953, 21:1087-1092.
-
(1953)
J Chem Phys
, vol.21
, pp. 1087-1092
-
-
Metropolis, N.1
Rosenbluth, A.2
Rosenbluth, M.3
Teller, A.4
Teller, E.5
-
33
-
-
77956890234
-
Monte Carlo sampling methods using Markov chains and their applications
-
Hastings W. Monte Carlo sampling methods using Markov chains and their applications. Biometrika 1970, 57:97-109.
-
(1970)
Biometrika
, vol.57
, pp. 97-109
-
-
Hastings, W.1
|