Human endogenous retrovirus transcription profiles of the kidney and kidney-derived cell lines

Journal of General Virology

Volumn 92, Issue 10, 2011, Pages 2356-2366

  Haupt, Sonja ^a   Tisdale, Michele ^b   Vincendeau, Michelle ^a   Clements, Mary Anne ^c   Gauthier, David T ^b   Lance, Raymond ^c   Semmes, O John ^c   Turqueti Neves, Adriana ^a   Noessner, Elfriede ^a   Leib Mösch, Christine ^a,d   Greenwood, Alex D ^b,e,f  

^a INSTITUTE OF EPIDEMIOLOGY   (Germany)

^b OLD DOMINION UNIVERSITY   (United States)

^c EASTERN VIRGINIA MEDICAL SCHOOL   (United States)

^d UNIVERSITY OF HEIDELBERG   (Germany)

^e FREIE UNIVERSITÄT BERLIN   (Germany)

^f LEIBNIZ INSTITUTE FOR ZOO AND WILDLIFE RESEARCH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CANCER CELL CULTURE; COMPARATIVE STUDY; DNA MICROARRAY; ENDOGENOUS RETROVIRUS; HUMAN; HUMAN CELL; HUMAN TISSUE; KIDNEY; KIDNEY CARCINOMA; KIDNEY CELL CULTURE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; VIRUS TRANSCRIPTION;

CARCINOMA, RENAL CELL; CELL LINE; ENDOGENOUS RETROVIRUSES; GENE EXPRESSION PROFILING; HUMANS; KIDNEY; KIDNEY NEOPLASMS; MICROARRAY ANALYSIS; TRANSCRIPTION, GENETIC;

HUMAN ENDOGENOUS RETROVIRUS; HUMAN ENDOGENOUS RETROVIRUSES;

EID: 80052929849     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.031518-0     Document Type: Article

References (35)

1. Alves, P. M. S., Lévy, N., Stevenson, B. J., Bouzourene, H., Theiler, G., Bricard, G., Viatte, S., Ayyoub, M., Vuilleumier, H. & other authors (2008). Identification of tumor-associated antigens by large-scale analysis of genes expressed in human colorectal cancer. Cancer Immun 8, 11.
2. Balada, E., Ordi-Ros, J. & Vilardell-Tarrés, M. (2009). Molecular mechanisms mediated by human endogenous retroviruses (HERVs) in autoimmunity. Rev Med Virol 19, 273-286.
3. Chen, Y., Demir, Y., Valujskikh, A. & Heeger, P. S. (2004). Antigen location contributes to the pathological features of a transplanted heart graft. Am J Pathol 164, 1407-1415.
4. Flockerzi, A., Ruggieri, A., Frank, O., Santer, M., Maldener, E., Kopper, B., Wullich, B., Seifarth, W., Müller-Lantzsch, N. & other authors (2008). Expression patterns of transcribed human endogenous retrovirus HERV-K (HML-2) loci in human tissues and the need for a HERV transcriptome project. BMC Genomics 9, 354.
5. Frank, O., Giehl, M., Zheng, C., Hehlmann, R., Leib-Mösch, C. & Seifarth, W. (2005). Human endogenous retrovirus expression profiles in samples from brains of patients with schizophrenia and bipolar disorders. J Virol 79, 10890-10901.
6. Frank, O., Verbeke, C., Schwarz, N., Mayer, J., Fabarius, A., Hehlmann, R., Leib-Mösch, C. & Seifarth, W. (2008). Variable transcriptional activity of endogenous retroviruses in human breast cancer. J Virol 82, 1808-1818.
7. Fuhrman, S. A., Lasky, L. C. & Limas, C. (1982). Prognostic significance of morphologic parameters in renal cell carcinoma. Am J Surg Pathol 6, 655-663.
8. Greenwood, A. D., Stengel, A., Erfle, V., Seifarth, W. & Leib-Mösch, C. (2005). The distribution of pol containing human endogenous retroviruses in non-human primates. Virology 334, 203-213.
9. Griffiths, D. J. (2001). Endogenous retroviruses in the human genome sequence. Genome Biol 2, REVIEWS1017.
10. Herbst, H., Sauter, M., Kühler-Obbarius, C., Löning, T. & Mueller- Lantzsch, N. (1998). Human endogenous retrovirus (HERV)-K transcripts in germ cell and trophoblastic tumours. APMIS 106, 216-220.
11. Iliopoulos, O., Kibel, A., Gray, S. & Kaelin, W. G., Jr (1995). Tumour suppression by the human von Hippel-Lindau gene product. Nat Med 1, 822-826.
12. Ishida, T., Obata, Y., Ohara, N., Matsushita, H., Sato, S., Uenaka, A., Saika, T., Miyamura, T., Chayama, K. & other authors (2008). Identification of the HERV-K gag antigen in prostate cancer by SEREX using autologous patient serum and its immunogenicity. Cancer Immun 8, 15.
13. Jern, P., Sperber, G. O. & Blomberg, J. (2005). Use of endogenous retroviral sequences (ERVs) and structural markers for retroviral phylogenetic inference and taxonomy. Retrovirology 2, 50.
14. Kawakami, T., Chano, T., Minami, K., Okabe, H., Okada, Y. & Okamoto, K. (2006). Imprinted DLK1 is a putative tumor suppressor gene and inactivated by epimutation at the region upstream of GTL2 in human renal cell carcinoma. Hum Mol Genet 15, 821-830.
15. Komohara, Y., Suekane, S., Noguchi, M., Matsuoka, K., Yamada, A. & Itoh, K. (2007). Expression of APOBEC3G in kidney cells. Tissue Antigens 69, 95-98.
16. Leisegang, M., Turqueti-Neves, A., Engels, B., Blankenstein, T., Schendel, D. J., Uckert, W. & Noessner, E. (2010). T-cell receptor gene-modified T cells with shared renal cell carcinoma specificity for adoptive T-cell therapy. Clin Cancer Res 16, 2333-2343.
17. Löwer, R., Boller, K., Hasenmaier, B., Korbmacher, C., Müller- Lantzsch, N., Löwer, J. & Kurth, R. (1993). Identification of human endogenous retroviruses with complex mRNA expression and particle formation. Proc Natl Acad Sci U S A 90, 4480-4484.
18. Medstrand, P., van de Lagemaat, L. N. & Mager, D. L. (2002). Retroelement distributions in the human genome: variations associated with age and proximity to genes. Genome Res 12, 1483-1495.
19. Nakano, O., Sato, M, Naito, Y., Suzuki, K., Orikasa, S., Aizawa, M., Suzuki, Y., Shintaku, I., Nagura, H. & Ohtani, H. (2001). Proliferative activity of intratumoral CD8+ T-lymphocytes as a prognostic factor in human renal cell carcinoma: clinicopathologic demonstration of antitumor immunity. Cancer Res 61, 5132-5136.
20. Nelson, P. N., Carnegie, P. R., Martin, J., Davari Ejtehadi, H., Hooley, P., Roden, D., Rowland-Jones, S., Warren, P., Astley, J. & Murray, P. G. (2003). Demystified. Human endogenous retroviruses. Mol Pathol 56, 11-18.
21. Rakoff-Nahoum, S., Kuebler, P. J., Heymann, J. J., Sheehy, M. E., Ortiz, G. M., Ogg, G. S., Barbour, J. D., Lenz, J., Steinfeld, A. D. & Nixon, D. F. (2006). Detection of T lymphocytes specific for human endogenous retrovirus K (HERV-K) in patients with seminoma. AIDS Res Hum Retroviruses 22, 52-56.
22. Romanish, M. T., Cohen, C. J. & Mager, D. L. (2010). Potential mechanisms of endogenous retroviral-mediated genomic instability in human cancer. Semin Cancer Biol 20, 246-253.
23. Ruprecht, K., Ferreira, H., Flockerzi, A., Wahl, S., Sauter, M., Mayer, J. & Mueller-Lantzsch, N. (2008a). Human endogenous retrovirus family HERV-K(HML-2) RNA transcripts are selectively packaged into retroviral particles produced by the human germ cell tumor line Tera-1 and originate mainly from a provirus on chromosome 22q11.21. J Virol 82, 10008-10016.
24. Ruprecht, K., Mayer, J., Sauter, M., Roemer, K. & Mueller-Lantzsch, N. (2008b). Endogenous retroviruses and cancer. Cell Mol Life Sci 65, 3366-3382.
25. Sauter, M., Schommer, S., Kremmer, E., Remberger, K., Dölken, G., Lemm, I., Buck, M., Best, B., Neumann-Haefelin, D. & Mueller- Lantzsch, N. (1995). Human endogenous retrovirus K10: expression of Gag protein and detection of antibodies in patients with seminomas. J Virol 69, 414-421.
26. Schiavetti, F., Thonnard, J., Colau, D., Boon, T. & Coulie, P. G. (2002). A human endogenous retroviral sequence encoding an antigen recognized on melanoma by cytolytic T lymphocytes. Cancer Res 62, 5510-5516.
27. Seifarth, W., Spiess, B., Zeilfelder, U., Speth, C., Hehlmann, R. & Leib-Mösch, C. (2003). Assessment of retroviral activity using a universal retrovirus chip. J Virol Methods 112, 79-91.
28. Seifarth, W., Frank, O., Zeilfelder, U., Spiess, B., Greenwood, A. D., Hehlmann, R. & Leib-Mösch, C. (2005). Comprehensive analysis of human endogenous retrovirus transcriptional activity in human tissues with a retrovirus-specific microarray. J Virol 79, 341-352.
29. Shastri, N. (1996). Needles in haystacks: identifying specific peptide antigens for T cells. Curr Opin Immunol 8, 271-277.
30. Shih, A., Misra, R. & Rush, M. G. (1989). Detection of multiple, novel reverse transcriptase coding sequences in human nucleic acids: relation to primate retroviruses. J Virol 63, 64-75.
31. Takahashi, Y., Harashima, N., Kajigaya, S., Yokoyama, H., Cherkasova, E., McCoy, J. P., Hanada, K., Mena, O., Kurlander, R. & other authors (2008). Regression of human kidney cancer following allogeneic stem cell transplantation is associated with recognition of an HERV-E antigen by T cells. J Clin Invest 118, 1099-1109.
32. Villesen, P., Aagaard, L., Wiuf, C. & Pedersen, F. S. (2004). Identification of endogenous retroviral reading frames in the human genome. Retrovirology 1, 32.
33. Wang-Johanning, F., Frost, A. R., Jian, B., Epp, L., Lu, D. W. & Johanning, G. L. (2003). Quantitation of HERV-K env gene expression and splicing in human breast cancer. Oncogene 22, 1528-1535.
34. Wang-Johanning, F., Radvanyi, L., Rycaj, K., Plummer, J. B., Yan, P., Sastry, K. J., Piyathilake, C. J., Hunt, K. K. & Johanning, G. L. (2008). Human endogenous retrovirus K triggers an antigen-specific immune response in breast cancer patients. Cancer Res 68, 5869-5877.
35. Weiss, R. A. (2006). The discovery of endogenous retroviruses. Retrovirology 3, 67.