Resilience of soil microbial communities impacted by severe drought and high temperature in the context of Mediterranean heat waves

European Journal of Soil Biology

Volumn 47, Issue 6, 2011, Pages 333-342

  Berard A ^a   Bouchet, T ^a   Sevenier G ^a   Pablo, A L ^b   Gros, R ^c  

^a UAPV   (France)

^b UMR ECO SOLS   (France)

^c AVIGNON UNIVERSITÉ   (France)

Author keywords

Drought; Heat wave; Microbial community structure; Resilience; Soil; Substrate induced respiration

Indexed keywords

EID: 80052859767     PISSN: 11645563     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ejsobi.2011.08.004     Document Type: Article

References (47)

1. Contribution of Working Group I to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, Cambridge University Press, Cambridge, United Kingdom and New York, NY, USA. S. Solomon, D. Qin, M. Manning, Z. Chen, M. Marquis, K.B. Averyt, M. Tignor, H.L. Miller (Eds.).
2. Planton S., Déqué M., Chauvin F., Terray L. Expected impacts of climate change on extreme climate events. C. R. Acad. Sci. Geosci. 2008, 340:564-574.
3. Gibelin A.L., Déqué M. Anthropogenic climate change over the Mediterranean region simulated by a global variable resolution model. Clim. Dynam. 2003, 20:327-339.
4. Contribution of Working Group II to the Fourth Assessment Report of the Intergovernmental Panel on Climate Change 2007, Cambridge University Press, Cambridge, UK. M.L. Parry, O.F. Canziani, J.P. Palutikof, P.J. van der Linden, C.E. Hanson (Eds.).
5. Heisler J.L., Weltzin J.F. Variability matters: towards a perspective on the influence of precipitation on terrestrial ecosystems. New Phytol. 2006, 172:189-192.
6. Mosier A.R. Soil processes and global change. Biol. Fertil. Soils 1998, 27:221-229.
7. Rynolds H.L., Packer A., Bever J.D., Clay K. Grassroots ecology: plant-microbe-soil interactions as drivers of plant community structure and dynamics. Ecology 2003, 84:2281-2291.
8. Bell C.W., Acosta-Martinez V., McIntyre N.E., Cox S., Tissue D.T., Zak J.C. Linking microbial community structure and function to seasonal differences in soil moisture and temperature in a Chihuahuan desert grassland. Microb. Ecol. 2009, 58:827-842.
9. Allison S.D., Martiny J.B.H. Resistance, resilience, and redundancy in microbial communities. PNAS 2008, 105:11512-11519.
10. Emmett B., Beier C., Estiarte M., Tietema A., Kristensen H.L., Williams D., Penuelas J., Schmidt I., Sowerby A. The response of soil processes to climate change: results from manipulation studies of shrublands across an environmental gradient. Ecosystems 2004, 7:625-637.
11. Sardans J., Peñuelas J., Estiarte M. Changes in soil enzymes related to C and N cycle and in soil C and N content under prolonged warming and drought in a Mediterranean shrubland. Appl. Soil Ecol. 2008, 39:223-235.
12. Williams M.A. Response of microbial communities to water stress in irrigated and drought-prone tallgrass prairie soils. Soil Biol. Biochem. 2007, 39:2750-2757.
13. Yuste J.C., Baldocchi D.D., Gershenson A., Goldstein A., Misson L., Wong S. Microbial soil respiration and its dependency on carbon inputs, soil temperature and moisture. Glob. Change Biol. 2007, 13:2018-2035.
14. Schimel J., Balser T.C., Wallenstein M. Microbial stress-response physiology and its implications for ecosystem function. Ecology 2007, 88:1386-1394.
15. Scheffer M., Carpenter S., Foley J.A., Folke C., Walker B. Catastrophic shifts in ecosystems. Nature 2001, 413:591-596.
16. A. Schneider, Influence du pelliculage sur l'inhibition de semences de maïs, Expérimentation et modélisation, Ph.D. thesis, Institut National Agronomique, Paris (France), 1996.
17. Fierer N., Schimel J.P. A proposed mechanism for the pulse in carbon dioxide production commonly observed following the rapid rewetting of a dry soil. Soil Sc. Soc. Am. J. 2003, 67:798-805.
18. Tlili A., Montuelle B., Bérard A., Bouchez A. Impact of chronic and acute pesticide exposures on periphyton communities. Sci. Tot. Environ. 2011, 409:2102-2113.
19. Kuan H.L., Fenwickb C., Glover L.A., Griffiths B.S., Ritz K. Functional resilience of microbial communities from perturbed upland grassland soils to further persistent or transient stresses. Soil Biol. Biochem. 2006, 38:2300-2306.
20. Fierer N., Schimel J.P. Effects of drying-rewetting frequency on soil carbon and nitrogen transformations. Soil Biol. Biochem. 2002, 34:777-787.
21. Campbell C.D., Chapman S.J., Cameron C.M., Davidson M.S., Potts J.M. A rapid microtiter plate method to measure carbon dioxide evolved from carbon substrate amendments so as to determine the physiological profiles of soil microbial communities by using whole soil. Appl. Environ. Microbiol. 2003, 69:3593-3599.
22. Anderson T.-H. Microbial eco-physiological indicators to assess soil quality. Agr. Ecosyst. Environ. 2003, 98:285-293.
23. Anderson J.P.E., Domsch K.H. A physiological method for the quantitative measurement of microbial biomass in soil. Soil Biol. Biochem. 1978, 10:215-221.
24. Zelles L. Fatty acid patterns of phospholipids and lipopolysaccharides in the characterisation of microbial communities in soil: a review. Biol. Fert. Soils 1999, 29:111-129.
25. Schutter M.E., Dick R.P. Comparison of fatty acid methyl ester (FAME) methods for characterizing microbial communities. Soil Sci. Soc. Am. J. 2000, 64:1659-1668.
26. Frostegard A., Bååth E., Tunlid A. Shifts in the structure of soil microbial communities in limed forests as revealed by phospholipid fatty-acid analysis. Soil Biol. Biochem. 1993, 25:723-730.
27. Klamer M., Bååth E. Microbial community dynamics during composting of straw material studied using phospholipid fatty acid analysis. FEMS Microbiol. Ecol. 1998, 27:9-20.
28. Chaer G., Fernandes M., Myrold D., Bottomley P. Comparative resistance and resilience of soil microbial communities and enzyme activities in adjacent native forest and agricultural soils. Microb. Ecol. 2009, 58:414-424.
29. Dorigo U., Bérard A., Rimet F., Bouchez A., Montuelle B. In situ assessment of periphyton recovery in a river contaminated by pesticides. Aquat. Toxicol. 2010, 98:396-406.
30. ter Braak C.J.F., Smilauer P. CANOCO Reference Manual and User's Guide to CANOCO for Windows®: Software for Canonical Community Ordination, Version 4.0.n Microcomputer Power 1998, Ithaca, New York.
31. Bray J.R., Curtis J.T. An ordination of the upland forest communities of southern Wisconsin. Ecol. Monog. 1957, 27:325-349.
32. Borken W., Matzner E. Reappraisal of drying and wetting effects on C and N mineralization and fluxes in soils. Glob. Change Biol. 2009, 15:808-824.
33. S-Xiang R., Doyle A., Holden P.A., Schimel J.P. Drying and rewetting effects on C and N mineralization and microbial activity in surface and subsurface California grassland soils. Soil Biol. Biochem. 2008, 40:2281-2289.
34. Prieto-Fernandez A., Acea M.J., Carballas T. Soil microbial and extractable C and N after wildfire. Biol. Fertil. Soils 1998, 27:132-142.
35. Lundquist E.J., Jackson L.E., Scow K.M. Wet-dry cycles affect dissolved organic carbon in two California agricultural soils. Soil Biol. Biochem. 1999, 31:1031-1038.
36. Degens B.P., Harris J.A. Development of a physiological approach to measuring the catabolic diversity of soil microbial communities. Soil Biol. Biochem. 1997, 29:1309-1320.
37. Uhlirova E., Elhottova J., Triska J., Santruckova H. Physiology and microbial community structure in soil at extreme water content. Folia Microbiol. 2005, 50:161-166.
38. Gordon H., Haygart P.M., Bardget R.D. Drying and rewetting effects on soil microbial community composition and nutrient leaching. Soil Biol. Biochem. 2008, 40:302-311.
39. Barcela-Moreno G., Bååth E. Bacterial and fungal growth in soil heated at different temperatures to simulate a range of fire intensities. Soil Biol. Biochem. 2009, 41:2517-2526.
40. Fierer N., Bradford M.A., Jackson R.B. Toward an ecological classification of soil bacteria. Ecology 2007, 88:1354-1364.
41. Thompson B.C., Ostle N.J., McNamara N.P., Whiteley A.S., Griffiths R.I. Effects of sieving, drying and rewetting upon soil bacterial community structure and respiration rates. J. Microbiol. Meth. 2010, 83:69-73.
42. Fierer N., Schimel J.P., Holden P.A. Influence of drying-rewetting frequency on soil bacterial community structure. Microb. Ecol. 2003, 45:63-71.
43. Banning N., Murphy D.V. Effect of heat-induced disturbance on microbial biomass and activity in forest soil and the relationship between disturbance effects and microbial community structure. Appl. Soil Ecol. 2008, 40:109-119.
44. Or D., Smets B.F., Wraith J.M., Deschesne A., Friedman S.P. Physical constraints affecting bacterial habitats and activity in unsaturated porous media - a review. Adv. Water Res. 2007, 30:1505-1527.
45. Philippot L., Cregut M., Cheneby D., Bressan M., Dequiet S., Martin-Laurent F., Ranjard L., Lemanceau P. Effect of primary mild stresses on resilience and resistance of the nitrate reducer community to a subsequent severe stress. FEMS Microbiol. Let. 2008, 285:51-57.
46. Wertz S., Czarnes S., Bartoli F., Renault P., Commeaux C., Guillaumaud N., Clays-Josserand A. Early-stage bacterial colonization between a sterilized remoulded soil clod and natural soil aggregates of the same soil. Soil Biol. Biochem. 2007, 39:3127-3137.
47. Gros R., Jocteur Monrozier L., Bartoli F., Chotte J.L., Faivre P. Relationships between soil physicochemical properties and microbial activity along a chronosequence of restored ski runs. Appl. Soil Ecol. 2004, 27:7-22.