A comparison of methods to determine neuronal phase-response curves

Frontiers in Neuroinformatics

Volumn 4, Issue MAR, 2010, Pages

  Torben Nielsen, Benjamin ^a   Uusisaari, Marylka ^a   Stiefel, Klaus M ^a  

^a OKINAWA INSTITUTE OF SCIENCE AND TECHNOLOGY GRADUATE UNIVERSITY   (Japan)

Author keywords

Action potential firing; Oscillation; Phase response curve; Quantitative method; Single neurons

Indexed keywords

EID: 80052780999     PISSN: 16625196     EISSN: None     Source Type: Journal    
DOI: 10.3389/fninf.2010.00006     Document Type: Article

References (17)

1. Ermentrout, G. B. (1996). Type I membranes, phase resetting curves, and synchrony. Neural. Comput. 8, 979-1001
2. Ermentrout, G. B., Galan, R. F., and Urban, N. N. (2007). Relating neural dynamics to neural coding. Phys. Rev. Lett. 99, 248103
3. Galán, R. F., Ermentrout, G. B., and Urban, N. N. (2005). Efficient estimation of phase-resetting curves in real neurons and its significance for neural-network modeling. Phys. Rev. Lett. 94, 158101
4. Golomb, D., and Amitai, Y. (1997). Propagating neuronal discharges in neocortical slices: computational and experimental study. J. Neurophysiol. 78, 1199-1211
5. Gutkin, B. S., Ermentrout, G. B., and Reyes, A. D. (2005). Phase-response curves give the responses of neurons to transient inputs. J. Neurophysiol. 94, 1623-1635
6. Hansel, D., Mato, G., and Meunier, C. (1995). Synchrony in excitatory neural networks. Neural. Comput. 7, 307-337
7. Hodgkin, A., and Huxley, A. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. J. Physiol. 117, 500-544
8. Izhikevich, E. M. (Ed.) (2007). Synchronization. In Dynamical Systems in Neuroscience: The Geometry of Excitability and Bursting. Cambridge, MA: MIT Press.
9. Marella, S., and Ermentrout, G. B. (2008). Class-II neurons display a higher degree of stochastic synchronization than class-I neurons. Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 77(Pt. 1), 041918.1-041918.12
10. Ota, K., Nomura, M., and Aoyagi, T. (2009a). Weighted spike-triggered average of a fluctuating stimulus yielding the phase response curve. Phys. Rev. Lett. 103, 024101.
11. Ota, K., Omori, T., and Aonishi, T. (2009b). Map estimation algorithm for phase response curves based on analysis of the observation process. J. Comput. Neurosci. 26, 185-202
12. Reyes, A. D., and Fetz, E. E. (1993). Two modes of interspike interval shortening by brief transient depolarizations in cat neocortical neurons. J. Neurophysiol. 69, 1661-1672
13. Stiefel, K. M., Gutkin, B. S., and Sejnowski, T. J. (2008). Cholinergic neuromodulation changes phase response curve shape and type in cortical pyramidal neurons. PLoS ONE 3, e3947. doi:10.1371/journal. pone.0003947
14. Stiefel, K. M., Gutkin, B. S., and Sejnowski, T. J. (2009). The effects of cholinergic neuromodulation on neuronal phaseresponse curves of modeled cortical neurons. J. Comput. Neurosci. 26, 289-301
15. Tateno, T., and Robinson, H. P. C. (2007). Phase resetting curves and oscillatory stability in interneurons of rat somatosensory cortex. Biophys. J. 92, 683-695
16. Torben-Nielsen, B., Uusisari, M., and Stiefel, K. M. (2010). A novel method for determining the phase-response curves of neurons based on minimizing spike-time prediction error. http:// arxiv.org/abs/1001.0446
17. Tsubo, Y., Takada, M., Reyes, A. D., and Fukai, T. (2007). Layer and frequency dependencies of phase response properties of pyramidal neurons in rat motor cortex. Eur. J. Neurosci. 25, 3429-3441.