Analysis of the endophytic lifestyle and plant growth promotion of Burkholderia terricola ZR2-12

Plant and Soil

Volumn 347, Issue 1, 2011, Pages 125-136

  Gasser, Ilona ^a   Cardinale, Massimiliano ^a   Müller, Henry ^a   Heller, Stefanie ^b   Eberl, Leo ^b   Lindenkamp, Nicole ^c   Kaddor, Chlud ^c   Steinbüchel, Alexander ^c   Berg, Gabriele ^a  

^a GRAZ UNIVERSITY OF TECHNOLOGY   (Austria)

^b UNIVERSITY OF ZURICH   (Switzerland)

^c UNIVERSITY OF MÜNSTER   (Germany)

Author keywords

Burkholderia terricola; CLSM; PHB; Plant growth promotion; Rhizosphere competence

Indexed keywords

BACTERIUM; BIOASSAY; BIOMASS; BIOTECHNOLOGY; COLONY; ECOSYSTEM FUNCTION; ENDOPHYTE; ESTER; GROWTH RATE; INOCULATION; MICROSCOPY; PATHOGEN; RHIZOSPHERE; ROOT COLONIZATION; ROOT SYSTEM; SOIL MICROORGANISM; SUGAR BEET; SURVIVAL; XYLEM;

BACTERIA (MICROORGANISMS); BETA VULGARIS SUBSP. VULGARIS; BURKHOLDERIA; BURKHOLDERIA TERRICOLA; EUKARYOTA;

EID: 80052775571     PISSN: 0032079X     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11104-011-0833-8     Document Type: Article

References (49)

1. Bais HP, Weir TL, Perry LG, Gilroy S, Vivanco JM (2006) The role of root exudates in rhizosphere interactions with plants and other organisms. Ann Rev Plant Biol 57: 234-266.
2. Berg G (2009) Plant-microbe interactions promoting plant growth and health: perspectives for controlled use of microorganisms in agriculture. Appl Microbiol Biotechnol 84: 11-18.
3. Berg G, Smalla K (2009) Plant species and soil type cooperatively shape the structure and function of microbial communities in the rhizosphere. FEMS Microbiol Ecol 68: 1-13.
4. Berg G, Roskot N, Steidle A, Eberl L, Zock A, Smalla K (2002) Plant-dependent genotypic and phenotypic diversity of antagonistic rhizobacteria isolated from different Verticillium host plants. Appl Environ Microbiol 68: 3328-3338.
5. Brämer CO, Silva LF, Gomez JG, Priefert H, Steinbüchel A (2002) Identification of the 2-methylcitrate pathway involved in the catabolism of propionate in the polyhydroxyalkanoate-producing strain Burkholderia sacchari IPT101(T) and analysis of a mutant accumulating a copolyester with higher 3-hydroxyvalerate content. Appl Environ Microbiol 68: 271-279.
6. Brown CM, Dilworth MJ (1975) Ammonia assimilation by Rhizobium cultures and bacteroids. J Gen Microbiol 86: 39-48.
7. Caballero-Mellado J, Onofre-Lemus J, Estrada-de los Santos P, Martínez-Aguilar L (2007) The tomato rhizosphere, an environment rich in nitrogen-fixing Burkholderia species with capabilities of interest for agriculture and bioremediation. Appl Environ Microbiol 73: 5308-5319.
8. Castro-Sowinski S, Burdman S, Matan O, Okon Y (2010) Natural functions of bacterial polyhydroxyalkanoates. Microbiol Monogr 14: 39-61.
9. Coenye T, Vandamme P (2003) Diversity and significance of Burkholderia species occupying diverse ecological niches. Environ Microbiol 5: 719-729.
10. Compant S, van der Heijden MGA, Sessitsch A (2010) Climate change effects on beneficial plant-microorganism interactions. FEMS Microbiol Ecol 73: 197-214.
11. De Lorenzo V, Timmis KN (1994) Analysis and construction of stable phenotypes in Gram-negative bacteria with TN5-and TN10-derived mini transposons. Methods Enzymol 235: 386-405.
12. Dekkers LC, Bloemendaal CJ, De Weger LA, Wijffelman CA, Spaink HP, Lugtenberg B (1998) A two-component system plays an important role in the root-colonizing ability of Pseudomonas fluorescens strain WCS365. Mol Plant Microb Interact 11: 45-56.
13. Gasser I, Müller H, Berg G (2009) Ecology and characterisation of polyhydroxyalkanoate-producing microorganisms on and in plants. FEMS Microbiol Ecol 70: 142-150.
14. Goris J, Dejonghe W, Falsen E, De Clerck E, Geeraerts B, Willems A (2002) Diversity of transconjugants that acquired plasmid pJP4 or pEMT1 after inoculation of a donor strain in the A- and B-horizon of an agricultural soil and description of Burkholderia hospita sp. nov. and Burkholderia terricola sp. nov. Syst Appl Microbiol 25: 340-352.
15. Hebbar PK, Martel MH, Heulin T (1998) Suppression of pre- and postemergence damping-off in corn by Burkholderia cepacia. Eur J Plant Pathol 104: 29-36.
16. Hontzeas N, Saleh SS, Glick RB (2004) Changes in gene expression in canola roots induced by ACC-deaminase-containing plant-growth-promoting bacteria. Mol Plant Microb Interact 17: 865-871.
17. Kadouri D, Jurkevitch E, Okon Y, Castro-Sowinski S (2005) Ecological and agricultural significance of bacterial polyhydroxyalkanoates. Crit Rev Microbiol 31: 55-67.
18. Kamilova F, Validov S, Azarova T, Mulders I, Lugtenberg B (2005) Enrichment for enhanced competitive plant root tip colonizers selects for a new class of biocontrol bacteria. Environ Microbiol 7: 1809-1817.
19. Keijer J, Korsman MG, Dullemans AM, Houterman PM, De Bree J, van Silfhout CH (2003) In vitro analysis of host plant specificity in Rhizoctonia solani. Plant Pathol 46: 659-669.
20. Lin CH, Bourque G, Tan P (2008) A comparative synteny map of 861 Burkholderia species links large-scale genome rearrangements to fine-scale nucleotide 862 variation in prokaryotes. Mol Biol Evol 25: 549-558.
21. Lugtenberg B, Kamilova F (2009) Plant-growth-promoting rhizobacteria. Annu Rev Microbiol 63: 541-556.
22. Mahenthiralingam E, Urban T, Goldberg J (2005) The multifarious, multireplicon Burkholderia cepacia complex. Nat Rev Microbiol 3: 144-156.
23. McClean KH, Winson MK, Fish L, Taylor A, Chhabra SR, Camara M, Daykin M, Lamb JH, Swift S, Bycroft BW, Stewart GSAB, Williams P (1997) Quorum sensing and Chromobacterium violaceum: exploitation of violacein production and inhibition for the detection of N-acylhomoserine lactones. Microbiology 143: 3703-3711.
24. McLoughlin TJ, Quinn JP, Bettermann A, Bookland R (1992) Pseudomonas cepacia suppression of sunflower wilt fungus and role of antifungal compounds in controlling the disease. Appl Environ Microbiol 58: 1760-1763.
25. Mei C, Flinn BS (2010) The use of beneficial microbial endophytes for plant biomass and stress tolerance improvement. Recent Pat Biotech 4: 81-95.
26. Onofre-Lemus J, Hernández-Lucas I, Girard L, Caballero-Mellado J (2009) ACC (1-Aminocyclopropane-1-Carboxylate) deaminase activity, a widespread trait in Burkholderia species, and its growth-promoting effect on tomato plants. Appl Environ Microbiol 70: 6581-6590.
27. Perin L, Martínez-Aguilar L, Paredes-Valdez G, Baldani JI, Estrada-de los Santos P, Reis VM, Caballero-Mellado J (2006) Burkholderia silvatlantica sp. nov., a diazotrophic bacterium associated with sugar cane and maize. Int J Syst Evol Microbiol 56: 1931-1937.
28. Reis VM, Estrada-de los Santos P, Tenorio-Salgado S, Vogel J, Stoffels M, Guyon S, Mavingui P, Baldani VL, Schmid M, Baldani JI, Balandreau J, Hartmann A, Caballero-Mellado J (2004) Burkholderia tropica sp nov., a novel nitrogen-fixing, plant-associated bacterium. Int J Syst Evol Microbiol 54: 2155-2162.
29. Sarwar M, Kremer RJ (1995) Determination of bacterially derived auxins using a microplate method. Lett Appl Microbiol 20: 282-285.
30. Schlegel HG, Kaltwasser H, Gottschalk G (1961) A submersion method for culture of hydrogen-oxidizing bacteria: growth physiological studies. Arch Microbiol 38: 209.
31. Schlegel HG, Lafferty R, Krauss I (1970) The isolation of mutants not accumulating poly-beta-hydroxybutyric acid. Arch Microbiol 71: 283-294.
32. Schmidt S, Blom JF, Pernthaler J, Berg G, Baldwin A, Mahenthiralingam E, Eberl L (2009) Production of the antifungal compound pyrrolnitrin is quorum sensing-regulated in members of the Burkholderia cepacia complex. Environ Microbiol 11: 1422-1437.
33. Schwyn B, Neilands JB (1987) Universal chemical assay for the detection and determination of siderophores. Anal Biochem 160: 47-56.
34. Sessitsch A, Coenye T, Sturz AV, Vandamme P, Ait Barka E, Faure D, Reiter B, Glick BR, Wang-Pruski G, Nowak J (2005) Burkholderia phytofirmans sp. nov., a novel plant-associated bacterium with plant beneficial properties. Int J Syst Evol Microbiol 55: 1187-1192.
35. Sokol PA, Malott RJ, Riedel K, Eberl L (2007) Communication systems in the genus Burkholderia: global regulators and targets for novel antipathogenic drugs. Future Microbiol 2: 555-563.
36. Sørensen J (1997) The rhizosphere as a habitat for soil microorganisms. In: van Elsas JD, Trevors JT, Wellington EMH (eds) Modern soil microbiology. Marcel Dekker, Inc., New York, pp 21-45.
37. Spiekermann P, Rehm BHA, Kalscheuer R, Baumeister D, Steinbüchel A (1999) A sensitive, viable-colony staining method using Nile red for direct screening of bacteria that accumulate polyhydroxyalkanoic acids and other lipid storage compounds. Arch Microbiol 171: 73-80.
38. Stein S, Levitsky A, Fateev O, Mallard G (1998) The NIST mass spectral search program. Windows-Software Version 1. 6d.
39. Steinbüchel A (2001) Perspectives for biotechnological production and utilization of biopolymers: metabolic engineering of polyhydroxyalkanoate biosynthesis pathways as a successful example. Macromol Biosci 1: 1-24.
40. Steinbüchel A, Valentin HE (2006) Diversity of bacterial polyhydroxyalkanoic acids. FEMS Microbiol Lett 128: 219-228.
41. Suárez-Moreno ZR, Caballero-Mellado J, Venturi V (2008) The new group of non-pathogenic plant-associated nitrogen-fixing Burkholderia spp. shares a conserved quorum-sensing system, which is tightly regulated by the RsaL repressor. Microbiology 154: 2048-2059.
42. Suárez-Moreno ZR, Devescovi G, Myers M, Hallack L, Mendonça-Previato L, Caballero-Mellado J, Venturi V (2010) Commonalities and differences in N-acyl homoserine lactone quorum sensing regulation in the novel species cluster of beneficial Burkholderia. Appl Environ Microbiol 76: 4302-4317.
43. Timm A, Steinbüchel A (1990) Formation of polyesters consisting of medium-chain-length 3-hydroxyalkanoic acids from gluconate by Pseudomonas aeruginosa and other fluorescent pseudomonads. Appl Environ Microbiol 56: 3360-3367.
44. Uthoff S, Stöveken T, Weber N, Vosmann K, Klein E, Kalscheuer R, Steinbüchel A (2005) Thio wax ester biosynthesis utilizing the unspecific bifunctional wax ester synthase/acyl-CoA: diacylglycerol acyltransferase of Acinetobacter calcoaceticus ADP1. Appl Environ Microbiol 71: 790-796.
45. van Oevelen S, De Wachter R, Vandamme P, Robbrecht E, Prinsen E (2002) Identification of the bacterial endosymbionts in leaf galls of Psychotria (Rubiaceae, angiosperms) and proposal of 'Candidatus Burkholderia kirkii' sp. nov. Int J Syst Evol Microbiol 52: 2023-2027.
46. Vandamme P, Goris J, Chen WM, de Vos P, Willems A (2002) Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov. nodulate the roots of tropical legumes. Syst Appl Microbiol 25: 507-512.
47. Vandamme P, Opelt K, Knochel N, Berg C, Schonmann S, DeBrandt E, Eberl L, Falsen E, Berg G (2007) Burkholderia bryophila sp. nov. and Burkholderia megapolitana sp. nov., moss-associated species with antifungal and plant-growth-promoting properties. Int J Syst Evol Microbiol 57: 2228-2235.
48. Vergunst AC, Meijer AH, Renshaw SA, O'Callaghan D (2010) Burkholderia cenocepacia creates an intramacrophage replication niche in zebrafish embryos, followed by bacterial dissemination and establishment of systemic infection. Infect Immun 78: 1495-1508.
49. Yabuuchi E, Kosako Y, Oyaizu H, Yano I, Hotta H, Hashimoto Y, Ezaki T, Arakawa M (1992) Proposal of Burkholderia gen. nov. and transfer of seven species of the genus Pseudomonas homology group I1 to the new genus, with the type species Burkholderia cepacia (Palleroni and Holmes 1981) comb. nov. Microbiol Immunol 36: 1251-1275.