Molecular and phenotypic characterization of Colletotrichum species associated with anthracnose disease of papaya in Trinidad

Plant Disease

Volumn 95, Issue 10, 2011, Pages 1244-1254

  Rampersad, Sephra N ^a  

^a UNIVERSITY OF THE WEST INDIES   (Trinidad and Tobago)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); CAPSICUM ANNUUM VAR. ANNUUM; CARICA PAPAYA; COLLETOTRICHUM; COLLETOTRICHUM TRUNCATUM;

EID: 80052741707     PISSN: 01912917     EISSN: None     Source Type: Journal    
DOI: 10.1094/PDIS-02-11-0080     Document Type: Article

References (84)

1. Alahakoon, P. W., Brown, A. E., and Sreenivasaprasad, S. 1994. Crossinfection potential of genetic groups of Colletotrichum gloeosporioides on tropical fruits. Physiol. Mol. Plant Pathol. 44:93-103.
2. Alvarez, A. M., and Nishijima, W. T. 1987. Postharvest diseases of papaya. Plant Dis. 71:681-687.
3. Anonymous. 2010. Biosecurity in New Zealand. http://www.biosecurity.govt.nz/regs/exports/plants/icpr/chile/tissue-culture-papaya
4. Ben-Daniel, B., Bar-Zvi, D., and Tsror, L. 2010. Transmission of Colletotrichum coccodes via tomato seeds. Phytoparasitica 38:167-174.
5. Brown, A. E., Sreenivasaprasad, S., and Timmer, L. W. 1996. Molecular characterization of slow-growing orange and Key lime anthracnose strains of Colletotrichum from citrus as C. acutatum. Phytopathology 86:523-527.
6. Brown, J. F., and Ogle, H. J. 1997. Plant pathogens and plant diseases. Endorsed by the Australasian Plant Pathology Society Inc., Armidale, N.S.W. Rockvale Publications for the Division of Botany, School of Rural Science and Natural Resources, University of New England. pp. 533-540.
7. Burns, P., Chubunmee, S., Pinon, P., and Kumdee, O. 2007. Identification of two 1-aminocyclopropane-1-carboxylate oxidase genes (CP-ACO1 and CPACO2) from Carica papaya and characterisation of putative CP-ACO1 promoter using agrobacterium infiltration. Acta Hortic. 740:163-168.
8. Cai, L., Hyde, K. D., Taylor, P. W. J., Weir, B. S., Waller, J., Abang, M. M., Zhang, J. Z., Yang, Y. L., Phoulivong, S., Liu, Z. Y., Prihastuti, H., Shivas, R. G., McKenzie, E. H. C., and Johnston, P. R. 2009. A polyphasic approach for studying Colletotrichum. Fungal Divers. 39:183-204.
9. Cannon, P. F., Buddie, A. G., and Bridge, P. D. 2008. The typification of Colletotrichum gloeosporioides. Mycotaxon 104:189-204.
10. Cardwell, K. F., Hepperly, P. R., and Frederiksen, R. A. 1989. Pathotypes of Colletotrichum graminicola and seed transmission of sorghum anthracnose. Plant Dis. 73:255-257.
11. Central Statistical Office (CSO). 2004. Tree crops under cultivation. Ministry of Planning and Development, The Republic of Trinidad and Tobago.
12. Chau, K. F., and Alvarez, A. M. 1983. A histological study of anthracnose on Carica papaya. Phytopathology 73:1113-1116.
13. Chung, W.-H., Ishii, H., Nishimura, K., Fukaya, M., Yano, K., and Kajitani, Y. 2006. Fungicide sensitivity and phylogenetic relationship of anthracnose fungi isolated from various fruit crops in Japan. Plant Dis. 90:506-512.
14. Coates, L. M., and Johnson, G. I. 1993. Effective disease control in heat disinfected fruit. Postharv. News Inform. 4:35N-40N.
15. Coates, L. M., and Johnson, G. I. 1997. Postharvest diseases of fruits and vegetables. Pages 533-547 in: Plant Pathogens and Plant Diseases. J. F. Brown and H. K. Ogle, eds. Australasian Plant Pathology Society.
16. Cooke, D. E. L., Drenth, A., Duncan, J. M., Wagels, G., and Brasier, C. M. 2000. A molecular phylogeny of Phytophthora and related oomycetes. Fungal Genet. Biol. 30:17-30.
17. Damm, U., Woudenberg, J. H. C., Cannon, P. F., and Crous, P. W. 2009. Colletotrichum species with curved conidia from herbaceous hosts. Fungal Divers. 39:45-87.
18. Debode, J., Van Hemelrijck, W., Baeyen, S., Creemers, P., Heungens, K., and Maes, M. 2009. Quantitative detection and monitoring of Colletotrichum acutatum in strawberry leaves using real-time PCR. Plant Pathol. 58:504-514.
19. Dickman, M. B., and Alvarez, A. M. 1983. Latent infection of papaya caused by Colletotrichum gloeosporioides. Plant Dis. 67:748-750.
20. Dickman, M. B., Patil, S. S., and Kolattukudy, P. E. 1982. Purification, characterization, and role in infection of an extracellular cutinolytic enzyme from Colletotrichum gloeosporioides Penz. on Carica papaya L. Physiol. Plant Pathol. 20:333-347.
21. European Plant Protection Organization (EPPO). 2010. Online. http://www.eppo.org
22. Farr, D. F., Rossman, A. Y., Pal, M. E., and McCray, E. B. 2007. Fungal Databases, Systemic Botany and Mycology Laboratory, ARS, USDA. Online. http://nt.ars-grin.gov/fungaldatabases/
23. Felsenstein, J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39:783-791.
24. Food and Agriculture Organization (FAO). 2010. Production statistics for papaya. FAO.
25. Ford, R., Banniza, S., Photita, W., and Taylor, P. W. J. 2004. Morphological and molecular discrimination of Colletotrichum truncatum causing anthracnose on lentil in Canada. Australas. Plant Pathol. 33:559-569.
26. Forster, H., Cummings, M. P., and Coffey, M. D. 2000. Phylogenetic relationships of Phytophthora species based on ribosomal ITS1 DNA sequence analysis with emphasis on Waterhouse groups V and VI. Mycol. Res. 104:1055-1061.
27. Freeman, S., Katan, T., and Shabi, E. 1998. Characterization of Colletotrichum species responsible for anthracnose diseases of various fruits. Plant Dis. 82:596-605.
28. Freeman, S., Minz, D., Jurkevitch, E., Maymon, M., and Shabi, E. 2000. Molecular analyses of Colletotrichum species from almond and other fruits. Phytopathology 90:608-614.
29. Freeman, S., Pham, M., and Rodriguez, R. J. 1993. Molecular genotyping of Colletotrichum species based on arbitrarily primed PCR, A-T-rich DNA, and nuclear DNA analyses. Exp. Mycol. 17:309-322.
30. Garrido, C., Carbú, M., Fernández-Acero, F. J., Budge, G., Vallejo, I., Colyer, A., and Cantoral, J. M. 2008. Isolation and pathogenicity of Colletotrichum spp. causing anthracnose of strawberry in south west Spain. Eur. J. Plant Pathol. 120:409-415.
31. Glass, N. L., and Donaldson, G. C. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Appl. Environ. Microbiol. 61:1323-1330.
32. Gramarnick, A., Frydman, R. B., and Barreta, D. 1994. Prevention of infection of soybean seeds by Colletotrichum truncatum by polyamide biosynthesis inhibitors. Phytopathology 84:1445-1448.
33. Grover, R. K., and Bansod, R. D. 1970. Seed borne nature of Colletotrichum capsici in chilli seeds and its control by seed dressing fungicides. Indian Phytopathol. 23:664-668.
34. Harp, T. L., Pernezny, K., Lewis Ivey, M. L., Miller, S. A., Kuhn, P. J., and Datnoff, L. 2008. The etiology of recent pepper anthracnose outbreaks in Florida. Crop Prot. 27:1380-1384.
35. Hewajulige, I. G. N., Sultanbawa, Y., Wilson Wijeratnam, R. S., and Wijesundara, R. L. C. 2009. Mode of action of chitosan coating on anthracnose disease control in papaya. Phytoparasitica 37:437-444.
36. Hyde, K. D., Cai, L., Cannon, P. F., Crouch, J. A., Crous, P. W., Damm, U., Goodwin, P. H., Chen, H., Johnston, P. R., Jones, E. B. G., Liu, Z. Y., McKenzie, E. H. C., Moriwaki, J., Noireung, P., Pennycook, S. R., Pfenning, L. H., Prihastuti, H., Sato, T., Shivas, R. G., Tan, Y. P., Taylor, P. W. J., Weir, B. S., Yang, Y. L., and Zhang, J. Z. 2009. Colletotrichum -names in current use. Fungal Divers. 39:147-182.
37. Kumara, K., and Rawal, R. D. 2008. Influence of carbon, nitrogen, temperature and pH on the growth and sporulation of some Indian isolates of Colletotrichum gloeosporioides causing anthracnose disease of papaya (Carica papaya L.). Trop. Agric. Res. Ext. 11:7-12.
38. Laurena, A. C., Magdalita, P. M., Hidalgo, M. S. P., Villegas, V. N., Mendoza, E. M. T., and Botella, J. R. 2002. Cloning and molecular characterization of ripening-related ACC synthase from papaya fruit (Carica papaya L.). Acta Hortic. 575:163-169.
39. Lewis-Ivey, M. L., Nava Diaz, C., and Miller, S. A. 2004. Identification and management of Colletotrichum acutatum on immature bell peppers. Plant Dis. 88:1198-1204.
40. Lubbe, C. M., Denman, S., Cannon, P. F., Groenewald, J. Z., Lamprecht, S. C., and Crous, P. W. 2004. Characterization of Colletotrichum species associated with diseases of Proteaceae. Mycologia 96:1268-1279.
41. Lurie, S. 1998. Postharvest heat treatments - A review. Postharv. Biol. Technol. 14:257-269.
42. Magdalita, P. M., Laurena, A. C., Yabut-Perez, B. M., Mendoza, E. M. T., and Botella, J. R. 2002. Progress in the development of transgenic papaya: Transformation of solo papaya using ACC synthase antisense construct (Carica papaya L.). Acta Hortic. 575:171-176.
43. Martinez Culebras, P. V., Querol, A. A., Suarez Fernandez, M. B., Garcia- Lopez, M. D., and Barrio, E. 2003. Phylogenetic relationship among Colletotrichum pathogens of strawberry and design of PCR primers for their identification. J. Phytopathol. 151:135-143.
44. Mills, R. R., Sreenivasaprasad, S., and Brown, A. E. 1992. Detection and differentiation of Colletotrichum gloeosporioides isolates using PCR RAPD bind patterns of Colletotrichum isolates from banana from Australia. FEMS Microbiol. Lett. 98:137-144.
45. Moriwaki, J., and Tsukiboshi, T. 2002. Grouping of Colletotrichum species in Japan based on rDNA sequences. J Gen. Plant Pathol. 68:307-320.
46. Morton, J. F. 1987. Papaya Carica papaya L. Pages 336-346 in: Fruits of Warm Climates. J. F. Morton, ed. Creative Resource Systems, Miami, FL.
47. Nascimento, R. J., Mizubuti, E. S. G., Câmara, M. P. S., Ferreira, M. F., Maymon, M., Freeman, S., and Michereff, S. J. 2010. First report of papaya fruit rot caused by Colletotrichum magna in Brazil. Plant Dis. 94:1506-1506.
48. Neupane, K. R., Mukatira, U. T., Kato, C., and Stiles, J. I. 1998. Cloning and characterization of fruit-expressed ACC synthase and ACC oxidase from papaya (Carica papaya L.). Acta Hortic. 461:329-337.
49. Ntahimpera, N., Wilson, L. L., and Ellis, M. A. 1999. Comparison of rain effects on splash dispersal of three Colletotrichum species infecting strawberry. Phytopathology 89:555-563.
50. Organization for Economic Co-Operation and Development (OECD). Consensus document on compositional considerations for new varieties of papaya (Carica papaya L.): Key food and feed nutrients, anti nutrients, toxicants environment. Environment, health and safety publications series on the safety of novel foods and feeds no. 21. http://www.oecd.org/dataoecd/16/28/46815336.env/jm/mono(2010)28
51. Peres, N. A. R., Souza, N. L., Peever, T. L., and Timmer, L. W. 2004. Benomyl sensitivity of isolates of Colletotrichum acutatum and C. gloeosporioides from citrus. Plant Dis. 88:125-130.
52. Peres, N. A. R., Timmer, L. W., Adaskaveg, J. E., and Correll, J. C. 2005. Lifestyles of Colletotrichum acutatum. Plant Dis. 89:784-796.
53. Photita, W., Taylor, P. W. J., Ford, R., Hyde, K. D., and Lumyong, S. 2005. Morphological and molecular characterization of Colletotrichum species from herbaceous plants in Thailand. Fungal Divers. 18:117-133.
54. Phoulivong, S., Cai, L., Chen, H., McKenzie, E., Abdelsalam, K., Chukeatirote, E., and Hyde, K. 2010. Colletotrichum gloeosporioides is not a common pathogen on tropical fruits. Fungal Divers. 44:33-43.
55. Prihastuti, H., Cai, L., Chen, H., McKenzie, E. H. C., and Hyde, K. D. 2009. Characterization of Colletotrichum species associated with coffee berries in northern Thailand. Fungal Divers. 39:89-109.
56. Ravi, S., Doraiswammy, S., Valluvaparadisan, V., and Jeyalakshmi, C. 2000. Seed-borne infection of French bean by Colletotrichum lindemuthianum. Acta Phytopathol. Entomol. Hungarica 34:283-291.
57. Redman, R. S., Dunigan, D. D., and Rodriguez, R. J. 2001. Fungal symbiosis from mutualism to parasitism: Who controls the outcome, host or invader? New Phytol. 151:705-716.
58. Saitou, N., and Nei, M. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
59. Sariah, M. 1989. Detection of benomyl resistance in the anthracnose pathogen, Colletotrichum capsici. J. Isl. Acad. Sci. 2:168-171.
60. Sepiah, M. 1994. Efficacy of propiconazole against fungi causing postharvest disease on Eksotika papaya. International Conference, Chaing Mai (Thailand), 19 July 1993. Australian Center for International Agricultural Research, Canberra, A.C.T. Australia.
61. Sew, Y. S., Lam, P. F., and Abu Bakar, U. K. 2007. Isolation and cloning of two 1-aminocyclopropane-1-carboxylate oxidases from Carica papaya var. Eksotika I and Eksotika II. Acta Hortic. 740:153-162.
62. Shenoy, B. D., Jeewon, R., Lam, W. H., Bhat, D. J., Than, P. P., Taylor, P. W. J., and Hyde, K. D. 2007. Morpho-molecular characterisation and epitypification of Colletotrichum capsici (Glomerellaceae, Sordariomycetes), the causative agent of anthracnose in chilli. Fungal Divers. 27:197-211.
63. Simmonds, J. H. 1966. A study of the species of Colletotrichum causing ripe fruit rots in Queensland. Queensl. J. Agric. Anim. Sci. 22:437-459.
64. Sivakumar, D., Hewarathgamagae, N. K., Wilson Wijeratnam, R. S., and Wijesundera, R. L. C. 2002. Effect of ammonium carbonate and sodium bicarbonate on anthracnose of papaya. Phytoparasitica 30:486-492.
65. Sreenivasaprasad, S., Mills, P. R., and Brown, A. E. 1994. Nucleotide sequence of the rDNA spacer 1 enables identification of isolates of Colletotrichum as C. acutatum. Mycol. Res. 98:186-188.
66. Stanghellini, M. E., and Aragaki, M. 1966. Relation of periderm formation and callose deposition to anthracnose resistance in papaya fruit. Phytopathology 56:444-450.
67. Sutton, B. C. 1992. The genus Glomerella and its anamorph Colletotrichum. Pages 1-26 in: Colletotrichum: Biology, Pathology and Control. J. A. Bailey and J. J. Jeger, eds. CAB International, Wallingford, UK.
68. Talhinhas, P., Sreenivasaprasad, S., Neves-Martins, J., and Oliveira, H. 2005. Molecular and phenotypic analyses reveal association of diverse Colletotrichum acutatum groups and a low level of C. gloeosporioides with olive anthracnose. Appl. Environ. Microbiol. 71:2987-2998.
69. Tamura, K., Dudley, J., Nei, M., and Kumar, S. 2007. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
70. Tamura, K., Nei, M., and Kumar, S. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Nat. Acad. Sci. USA 101:11030-11035.
71. Tapia-Tussell, R., Quijano-Ramayo, A., Cortes-Velazquez, A., Lappe, P., Larque-Saavedra, A., and Perez-Brito, D. 2008. PCR-based detection and characterization of the fungal pathogens Colletotrichum gloeosporioides and Colletotrichum capsici causing anthracnose in papaya (Carica papaya L.) in the Yucatan Peninsula. Mol. Biotechnol. 40:293-298.
72. Tarnowski, T. B. L., and Ploetz, R. C. 2010. First report of Colletotrichum capsici causing postharvest anthracnose on papaya in South Florida. Plant Dis. 94:1065.
73. Tasiwal, V., and Benagi, V. I. 2009. Studies on the cultural and nutritional characteristics of Colletotrichum gloeosporioides, the causal organism of papaya anthracnose. Karnataka J. Agric. Sci. 22:787-789.
74. Teixeira da Silva, J. A., Rashid, Z., Nhut, D. T., Sivakumar, D., Gera, A., Teixeira Souza, M., Jr., and Tennant, P. F. 2007. Papaya (Carica papaya L.) Biology and Biotechnology. Tree Forestry Sci. Biotechnol. 1:47-73.
75. Than, P. P., Jeewon, R., Hyde, K. D., Pongsupasamit, S., Mongkolporn, O., and Taylor, P. W. J. 2008. Characterization and pathogenicity of Colletotrichum species associated with anthracnose on chilli (Capsicum spp.) in Thailand. Plant Pathol. 57:562-572.
76. Than, P. P., Prihastuti, H., Phoulivong, S., Taylor, P. W., and Hyde, K. D. 2008. Chilli anthracnose disease caused by Colletotrichum species. J. Zhejiang Univ. Sci. 9:764-778.
77. Than, P. P., Shivas, R. G., Jeewon, R., Pongsupasamit, S., Marney, T. S., Taylor, P. W. J., and Hyde, K. D. 2008. Epitypification and phylogeny of Colletotrichum acutatum J.H. Simmonds. Fungal Divers. 28:97-108.
78. Thomas, G. J., and Sweetingham, M. W. 2003. Fungicide seed treatments reduce seed transmission and severity of lupin anthracnose caused by Colletotrichum gloeosporioides. Australas. Plant Pathol. 32:39-46.
79. Trujillo, E. E., and Obrero, F. P. 1969. Anthracnose of papaya leaves caused by Colletotrichum gloeosporioides Plant Dis. Rep. 53:323-325.
80. Uchida, J. Y., Kadooka, C. Y., Aragaki, M., and Manshardt, R. 1996. Papaya seedling blight and damping off caused by Colletotrichum gloeosporioides in Hawaii. Plant Dis. 80:712.
81. Van Hemelrijck, W., Debode, J., Heungens, K., Maes, M., and Creemers, P. 2010. Phenotype and genetic characterization of Colletotrichum isolates from Belgian strawberry fields. Plant Pathol. 59:853-861.
82. Ventura, J. A., Costa, H., and da Silva Tatagiba, J. 2004. Papaya diseases and integrated control. Pages 201-235 in: Diseases of fruits and vegetables-Diagnosis and management, Vol. II. S. A. M. H. Naqvi, ed. Kluwer Academic Publishers, Dordrecht, Netherlands.
83. White, T. J., Bruns, T., Lee, S., and Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pages 315-322 in: PCR Protocols: A Guide to Methods and Applications. M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White, eds. Academic Press, New York.
84. Yaguchi, Y., Nakanishi, Y., Saito, T., and Nakamura, S. 1995. Anthracnose of Carica papaya L. caused by Colletotrichum capsici. Ann. Phytopathol. Soc. Jpn. 61:222.