Magnetic particles and cadmium sulfide nanoparticles tagging for signal-amplifying detection of nucleic acids

Science China Chemistry

Volumn 54, Issue 8, 2011, Pages 1304-1310

  Dong, Xiaoya ^a   Zhao, Weiwei ^a   Xu, Jingjuan ^a   Chen, Hongyuan ^a  

^a NANJING UNIVERSITY   (China)

Author keywords

CdS nanoparticles; electrochemical DNA assay; nicking endonuclease; square wave stripping voltammetry

Indexed keywords

ANALYTES; BIOLOGICAL ASSAYS; CADMIUM SULFIDE NANOPARTICLE; CDS; CDS NANOPARTICLES; DETECTION LIMITS; DNA DETECTION; DNA HYBRIDIZATION; DNA RECOGNITION; DOUBLE STRANDS; ELECTROCHEMICAL DNA ASSAY; ENDONUCLEASES; HIGH SENSITIVITY; LINKER DNA; MAGNETIC PARTICLE; NICKING ENDONUCLEASE; RE-HYBRIDIZATION; REPRODUCIBILITIES; SIGNAL AMPLIFICATIONS; SPECIFIC SEQUENCES; SQUARE-WAVE STRIPPING VOLTAMMETRY; ULTRASENSITIVE DETECTION; WIDE-LINEAR RANGE;

ASSAYS; CADMIUM; CADMIUM COMPOUNDS; DNA; NANOMAGNETICS; NANOPARTICLES; RECYCLING; SIGNAL DETECTION; VOLTAMMETRY;

CADMIUM SULFIDE;

EID: 80052654565     PISSN: 16747291     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11426-011-4328-5     Document Type: Article

References (28)

1. F. Lucarelli G. Marrazza A.P.F. Turner M. Mascini 2004 Carbon and gold electrodes as electrochemical transducers for DNA hybridisation sensors Biosens Bioelectron 19 515 530 10.1016/S0956-5663(03)00256-2 1:CAS:528: DC%2BD3sXpvVWrsr0%3D (Pubitemid 37542345)
2. A. Sassolas B.D. Leca-Bouvier L.J. Blum 2008 DNA biosensors and microarrays Chem Rev 108 109 139 10.1021/cr0684467 1:CAS:528:DC%2BD2sXhsVCrsbzL (Pubitemid 351176406)
3. S.P. Song Y. Qin Y. He Q. Huang C.H. Fan H.Y. Chen 2010 Functional nanoprobes for ultrasensitive detection of biomolecules Chem Soc Rev 39 11 4234 4243 10.1039/c000682n 1:CAS:528:DC%2BC3cXhtlShtb3L
4. B. Schweitzer S. Wiltshire J. Lambert S. O'Malley K. Kukanskis Z.R. Zhu S.F. Kingsmore P.M. Lizardi D.C. Ward 2000 Immunoassays with rolling circle DNA amplification: A versatile platform for ultrasensitive antigen detection Proc Natl Acad Sci USA 97 10113 10119 10.1073/pnas.170237197 1:CAS:528: DC%2BD3cXmtlehsbk%3D
5. D.H. Van Winkle A. Beheshti R.L. Rill 2002 DNA electrophoresis in agarose gels: A simple relation describing the length dependence of mobility Electrophoresis 23 15 19 10.1002/1522-2683(200201)23:1<15::AID-ELPS15>3.0. CO;2-L (Pubitemid 34092979)
6. R.L. Rill A. Beheshti D.H. Van Winkle 2002 DNA electrophoresis in agarose gels: Effects of field and gel concentration on the exponential dependence of reciprocal mobility on DNA length Electrophoresis 23 2710 2719 10.1002/1522-2683(200208)23:16<2710::AID-ELPS2710>3.0.CO;2-0 1:CAS:528:DC%2BD38XntVSis74%3D (Pubitemid 35023713)
7. A. Merkoci M. Aldavert S. Marin S. Alegret 2005 New materials for electrochemical sensing V: Nanoparticles for DNA labeling Trac-Trends Anal Chem 24 341 349 10.1016/j.trac.2005.03.019 1:CAS:528:DC%2BD2MXivVKqsr4%3D (Pubitemid 41429295)
8. J.A. Hansen J. Wang A.N. Kawde Y. Xiang K.V. Gothelf G. Collins 2006 Quantum-dot/aptamer-based ultrasensitive multi-analyte electrochemical biosensor J Am Chem Soc 128 2228 2229 10.1021/ja060005h 1:CAS:528:DC%2BD28XotlWqug%3D%3D
9. S.J. Xiao P.P. Hu X.D. Wu Y.L. Zou L.Q. Chen L. Peng J. Ling S.J. Zhen L. Zhan Y.F. Li C.Z. Huang 2010 Sensitive discrimination and detection of prion disease-associated isoform with a dual-aptamer strategy by developing a sandwich structure of magnetic microparticles and quantum dots Anal Chem 82 9736 9742 10.1021/ac101865s 1:CAS:528:DC%2BC3cXhtlKjsLzL
10. R. Fu T. Li H.G. Park 2009 An ultrasensitive DNAzyme-based colorimetric strategy for nucleic acid detection Chem Commun 39 5838 5840 10.1039/b907762f
11. T. Kiesling K. Cox E.A. Davidson K. Dretchen G. Grater S. Hibbard R.S. Lasken J. Leshin E. Skowronski M. Danielsen 2007 Sequence specific detection of DNA using nicking endonuclease signal amplification (NESA) Nucleic Acids Res 35 18 e117 10.1093/nar/gkm654 (Pubitemid 350018595)
12. K. Hosoda T. Matsuura H. Kita N. Ichihashi K. Tsukada I. Urabe T. Yomo 2008 A novel sequence-specific RNA quantification method using nicking endonuclease, dual-labeled fluorescent DNA probe, and conformation- interchangeable oligo-DNA Rna-a Publication of the Rna Society 14 3 584 592 1:CAS:528:DC%2BD1cXivFaqsb8%3D (Pubitemid 351397823)
13. W. Xu X.J. Xue T.H. Li H.Q. Zeng X.G. Liu 2009 Ultrasensitive and selective colorimetric dna detection by nicking endonuclease assisted nanoparticle amplification Angew Chem Int Ed 48 37 6849 6852 10.1002/anie.200901772 1:CAS:528:DC%2BD1MXhtVOrtrvO
14. Y. Xu K.D. Lunnen H.M. Kong 2001 Engineering a nicking endonuclease N.AlwI by domain swapping Proc Natl Acad Sci USA 98 23 12990 12995 10.1073/pnas.241215698 1:CAS:528:DC%2BD3MXosFygsrY%3D (Pubitemid 33051305)
15. J.J. Li Y. Chu B.-H. Lee X.S. Xie 2008 Enzymatic signal amplification of molecular beacons for sensitive DNA detection Nucleic Acids Res 36 6 e36 10.1093/nar/gkn033 (Pubitemid 351494253)
16. K.L. Sanders L.E. Catto S.R.W. Bellamy S.E. Halford 2009 Targeting individual subunits of the FokI restriction endonuclease to specific DNA strands Nucleic Acids Res 37 7 2105 2115 10.1093/nar/gkp046 1:CAS:528: DC%2BD1MXltFWktr4%3D
17. R.M. Kong X.B. Zhang L.L. Zhang Y. Huang D.Q. Lu W.H. Tan G.L. Shen R.Q. Yu 2011 Molecular beacon-based junction probes for efficient detection of nucleic acids via a true target-triggered enzymatic recycling amplification Anal Chem 83 1 14 17 10.1021/ac1025072 1:CAS:528:DC%2BC3cXhsV2ksLzF
18. S.H. Chan B.L. Stoddard S.Y. Xu 2011 Natural and engineered nicking endonucleases-from cleavage mechanism to engineering of strand-specificity Nucleic Acids Res 39 1 1 18 10.1093/nar/gkq742 1:CAS:528:DC%2BC3MXhtlCmt7w%3D
19. G.L. Wang P.P. Yu J.J. Xu H.Y. Chen 2009 A label-free photoelectrochemical immunosensor based on water-soluble CdS quantum dots J Phys Chem C 113 25 11142 11148 10.1021/jp902069s 1:CAS:528:DC%2BD1MXmsleisLo%3D
20. R. Gill I. Willner I. Shweky U. Banin 2005 Fluorescence resonance energy transfer in CdSe/ZnS-DNA conjugates: Probing hybridization and DNA cleavage J Phys Chem B 109 49 23715 23719 10.1021/jp054874p 1:CAS:528:DC%2BD2MXht1amtr3K (Pubitemid 43081547)
21. W. Cheng F. Yan L. Ding H.X. Ju Y.B. Yin 2010 Cascade signal amplification strategy for subattomolar protein detection by rolling circle amplification and quantum dots tagging Anal Chem 82 8 3337 3342 10.1021/ac100144g 1:CAS:528:DC%2BC3cXjvVKntbk%3D
22. X.Y. Dong X.N. Mi W.W. Zhao J.J. Xu H.Y. Chen 2011 CdS nanoparticles functionalized colloidal carbon particles: Preparation, characterization and application for electrochemical detection of thrombin Biosens Bioelectron 26 8 3654 3659 10.1016/j.bios.2011.02.023 1:CAS:528:DC%2BC3MXjvFeisbc%3D
23. W.W. Yu L.H. Qu W.Z. Guo X.G. Peng 2003 Experimental determination of the extinction coefficient of CdTe, CdSe, and CdS nanocrystals Chem Mater 15 14 2854 2860 10.1021/cm034081k 1:CAS:528:DC%2BD3sXks12msrw%3D
24. P. Hu C.Z. Huang Y.F. Li J. Ling Y.L. Liu L.R. Fei J.P. Xie 2008 Magnetic particle-based sandwich sensor with DNA-modified carbon nanotubes as recognition elements for detection of DNA hybridization Anal Chem 80 5 1819 1823 10.1021/ac702187y 1:CAS:528:DC%2BD1cXhtFymsbo%3D (Pubitemid 351429590)
25. S. Pinijsuwan P. Rijiravanich M. Somasundrum W. Surareungchai 2008 Sub-femtomolar electrochemical detection of DNA hybridization based on latex/gold nanoparticle-assisted signal amplification Anal Chem 80 17 6779 6784 10.1021/ac800566d 1:CAS:528:DC%2BD1cXptVyrt7k%3D
26. C.F. Ding Y. Ge J.M. Lin 2010 Aptamer based electrochemical assay for the determination of thrombin by using the amplification of the nanoparticles Biosens Bioelectron 25 6 1290 1294 10.1016/j.bios.2009.10.017 1:CAS:528:DC%2BC3cXktVWrsA%3D%3D
27. D. Li S.P. Song C.H. Fan 2010 Target-responsive structural switching for nucleic acid-based sensors Acc Chem Res 45 7 631 641 10.1021/ar900245u
28. J. Zhang S.P. Song L.H. Wang D. Pan C.H. Fan 2007 A gold nanoparticle-based chronocoulometric DNA sensor for amplified detection of DNA Nat Protoc 2 11 2888 2897 10.1038/nprot.2007.419 1:CAS:528:DC%2BD2sXhtlSlsr%2FE