Robust spectral analysis of videocapsule images acquired from celiac disease patients

BioMedical Engineering Online

Volumn 10, Issue , 2011, Pages

  Ciaccio, Edward J ^a   Tennyson, Christina A ^a   Bhagat, Govind ^a,b   Lewis, Suzanne K ^a   Green, Peter H R ^a  

^a Columbia University ^*  (United States)

^b Department of Medicine   (United States)

Author keywords

Celiac disease; Ensemble average; Fourier transform; Small intestine; Spectral analysis

Indexed keywords

ABSOLUTE DIFFERENCE; ACCURATE ESTIMATION; AIR BUBBLES; CELIAC DISEASE; DOMINANT FREQUENCY; ENSEMBLE AVERAGES; ENSEMBLE AVERAGING; FOURIER; FRAME RATE; IMAGE SEQUENCE; IMAGE TEXTURE; MEAN ABSOLUTE ERROR; PIXEL RESOLUTION; POWER-SPECTRA; RANDOM NOISE; SEQUENTIAL IMAGES; SMALL INTESTINE; SPECTRAL PEAK;

DIGESTIVE SYSTEM; ESTIMATION; FOURIER ANALYSIS; PHASE SHIFT; PIXELS; SPECTRUM ANALYSIS; WHITE NOISE;

FOURIER TRANSFORMS;

ALGORITHM; ARTICLE; CAPSULE ENDOSCOPY; CELIAC DISEASE; DUODENUM; FACTUAL DATABASE; FOURIER ANALYSIS; HUMAN; METHODOLOGY; PATHOLOGY; PERIODICITY; PERISTALSIS; REPRODUCIBILITY; RETROSPECTIVE STUDY; SENSITIVITY AND SPECIFICITY;

ALGORITHMS; CAPSULE ENDOSCOPY; CELIAC DISEASE; DATABASES, FACTUAL; DUODENUM; FOURIER ANALYSIS; HUMANS; PERIODICITY; PERISTALSIS; REPRODUCIBILITY OF RESULTS; RETROSPECTIVE STUDIES; SENSITIVITY AND SPECIFICITY;

EID: 80052574172     PISSN: 1475925X     EISSN: 1475925X     Source Type: Journal    
DOI: 10.1186/1475-925X-10-78     Document Type: Article

References (29)

1. Green PH. Mortality in celiac disease, intestinal inflammation, and gluten sensitivity. JAMA 2009, 302:1225-1226. 10.1001/jama.2009.1366, 19755704.
2. Tennyson CA, Lewis SK, Green PH. New and developing therapies for celiac disease. Therap Adv Gastroenterol 2009, 2:303-309. 10.1177/1756283X09342759, 3002532, 21180558.
3. Ludvigsson JF, Green PH. Clinical management of coeliac disease. J Intern Med 2011, 269(6):560-571. 10.1111/j.1365-2796.2011.02379.x, 21443532.
4. Rey JF, Repici A, Kuznetsov K, Boyko V, Aabakken L. Optimal preparation for small bowel examinations with video capsule endoscopy. Dig Liver Dis 2009, 41:486-493. 10.1016/j.dld.2008.09.016, 19158002.
5. Triantafyllou K. Can we improve the diagnostic yield of small bowel video-capsule endoscopy?. World J Gastrointest Endosc 2010, 2:143-146. 10.4240/wjgs.v2.i4.143, 2999125, 21160741.
6. Vilarino F, Spyridonos P, Pujol O, Vitria J, Radeva P, DeIorio F. Automatic Detection of Intestinal Juices in Wireless Capsule Video Endoscopy. Pattern Recognition 2006 2006, 4:719-722. 18th International Conference, Hong Kong; FCPR.
7. Vilarino F, Spyridonos P, DeIorio F, Vitria J, Azpiroz F, Radeva P. Intestinal motility assessment with video capsule endoscopy: automatic annotation of phasic intestinal contractions. IEEE Trans Med Imaging 2010, (29):246-259.
8. Ciaccio EJ, Tennyson CA, Lewis SK, Krishnareddy S, Bhagat G, Green PHR. Distinguishing patients with celiac disease by quantitative analysis of videocapsule endoscopy images. Comput Methods Programs Biomed 2010, 100(1):39-48. 10.1016/j.cmpb.2010.02.005, 20356648.
9. Botteron GW, Smith JM. A technique for measurement of the extent of spatial organization of atrial activation during atrial fibrillation in the intact human heart. IEEE Trans Biomed Eng 1995, 42:579-586. 10.1109/10.387197, 7790014.
10. Botteron GW, Smith JM. Quantitative assessment of the spatial organization of atrial fibrillation in the intact human heart. Circulation 1996, 93:513-518.
11. Fischer G, Stühlinger MC, Nowak CN, Wieser L, Tilg B, Hintringer F. On computing dominant frequency from bipolar intracardiac electrograms. IEEE Trans Biomed Eng 2007, 54:165-169.
12. Ng J, Kadish AH, Goldberger JJ. Effect of electrogram characteristics on the relationship of dominant frequency to atrial activation rate in atrial fibrillation. Heart Rhythm 2006, 3:1295-1305. 10.1016/j.hrthm.2006.07.027, 17074635.
13. Ng J, Kadish AH, Goldberger JJ. Technical considerations for dominant frequency analysis. J Cardiovasc Electrophysiol 2007, 18:757-764. 10.1111/j.1540-8167.2007.00810.x, 17578346.
14. Ciaccio EJ, Biviano AB, Whang W, Wit AL, Garan H, Coromilas J. New methods for estimating local electrical activation rate during atrial fibrillation. Heart Rhythm 2009, 6:21-32. 10.1016/j.hrthm.2008.10.016, 19121796.
15. Ciaccio EJ, Biviano AB, Whang W, Wit AL, Coromilas J, Garan H. Optimized measurement of activation rate at left atrial sites with complex fractionated electrograms during atrial fibrillation. J Cardiovasc Electrophysiol 2010, 21:133-143. 10.1111/j.1540-8167.2009.01595.x, 19793138.
16. Metzger YC, Adler SN, Shitrit AB, Koslowsky B, Bjarnason I. Comparison of a new PillCam™ SB2 video capsule versus the standard PillCam™ SB for detection of small bowel disease. Reports in Medical Imaging 2009, 2:7-11.
17. Ciaccio EJ, Biviano AB, Whang W, Coromilas J, Garan H. A new transform for the analysis of complex fractionated atrial electrograms. Biomed Eng Online 2011, 10:35. 10.1186/1475-925X-10-35, 3125385, 21569421.
18. Press WH, Flannery BP, Teukolsky SA, Vetterling WT. Numerical Recipes in C: The Art of Scientific Computing. 1992, 501-502. New York, NY: Cambridge Univ. Press, 2.
19. Frigo M, Johnson SG. The design and implementation of FFTW3. Proc IEEE 2005, 93:216-231.
20. Green PH. Celiac disease: how many biopsies for diagnosis?. Gastrointest Endosc 2008, 67:1088-1090. 10.1016/j.gie.2007.12.035, 18513550.
21. Vécsei A, Fuhrmann T, Liedlgruber M, Brunauer L, Payer H, Uhl A. Automated classification of duodenal imagery in celiac disease using evolved Fourier feature vectors. Comput Methods Programs Biomed 2009, 95(2 Suppl):S68-S78.
22. Ciaccio EJ, Tennyson CA, Bhagat G, Lewis SK, Green PH. Classification of videocapsule endoscopy image patterns: comparative analysis between patients with celiac disease and normal individuals. BioMed Eng OnLine 2010, 9:44-55. 10.1186/1475-925X-9-44, 2941491, 20815911.
23. Charisis V, Hadjileontiadis LJ, Liatsos CN, Mavrogiannis CC, Sergiadis GD. Abnormal pattern detection in wireless capsule endoscopy images using nonlinear analysis in RGB color space. Conf Proc IEEE Eng Med Biol Soc 2010, 1:3674-3677. Engineering in Medicine and Biology Society (EMBC), 2010 Annual International Conference of the IEEE Aug. 31 2010-Sept. 4 2010 Buenos Aires.
24. Gheorghe C, Iacob R, Bancila I. Olympus capsule endoscopy for small bowel examination. J Gastrointestin Liver Dis 2007, 16:309-313.
25. Culliford A, Daly J, Diamond B, Rubin M, Green PH. The value of wireless capsule endoscopy in patients with complicated celiac disease. Gastrointest Endosc 2005, 62:55-61. 10.1016/S0016-5107(05)01566-X, 15990820.
26. Green PH, Rubin M. Capsule endoscopy in celiac disease. Gastrointest Endosc 2005, 62:797-799. 10.1016/j.gie.2005.07.034, 16246703.
27. Green PH, Rubin M. Capsule endoscopy in celiac disease: diagnosis and management (Review). Gastrointest Endosc Clin N Am 2006, 16:307-316. 10.1016/j.giec.2006.03.003, 16644459.
28. Seguí S, Igual L, Radeva P, Malagelada C, Azpiroz F, Vitrià J. A semi-supervised learning method for motility disease diagnostic. Progress in Pattern Recognition, Image Analysis and Applications Lecture Notes in Computer Science 2007, 4756:773-782.
29. Seguí S, Igual L, Vilariño F, Radeva P, Malagelada C, Azpiroz F, Vitrià J. Diagnostic system for intestinal motility disfunctions using video capsule endoscopy. Computer Vision Systems Lecture Notes in Computer Science 2008, 5008:251-260.