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Volumn 39, Issue 16, 2011, Pages 6879-6885

Direct and indirect effects in the regulation of overlapping promoters

Author keywords

[No Author keywords available]

Indexed keywords

DNA BINDING PROTEIN; REGULATOR PROTEIN; RNA POLYMERASE;

EID: 80052502602     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkr390     Document Type: Article
Times cited : (23)

References (19)
  • 1
    • 0028298256 scopus 로고
    • Promoters responsive to DNA bending: A common theme in prokaryotic gene expression
    • Perez-Martin, J., Rojo, F. and de Lorenzo, V. (1994) Promoters responsive to DNA bending: a common theme in prokaryotic gene expression. Microbiol. Rev., 58, 268-290.
    • (1994) Microbiol. Rev. , vol.58 , pp. 268-290
    • Perez-Martin, J.1    Rojo, F.2    De Lorenzo, V.3
  • 2
    • 0004211673 scopus 로고    scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Ptashne, M. and Gann, A. (2002) Genes and Signals. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (2002) Genes and Signals
    • Ptashne, M.1    Gann, A.2
  • 4
    • 0027314409 scopus 로고
    • Protein-induced bending as a transcriptional switch
    • Perez-Martin, J. and Espinosa, M. (1993) Protein-induced bending as a transcriptional switch. Science, 260, 805-807. (Pubitemid 23167608)
    • (1993) Science , vol.260 , Issue.5109 , pp. 805-807
    • Perez-Martin, J.1    Espinosa, M.2
  • 5
    • 0029153579 scopus 로고
    • Repression and activation of transcription by Gal and Lac repressors: Involvement of alpha subunit of RNA polymerase
    • Choy, H.E., Park, S.W., Aki, T., Parrack, P., Fujita, N., Ishihama, A. and Adhya, S. (1995) Repression and activation of transcription by Gal and Lac repressors: involvement of alpha subunit of RNA polymerase. EMBO J., 14, 4523-4529.
    • (1995) EMBO J. , vol.14 , pp. 4523-4529
    • Choy, H.E.1    Park, S.W.2    Aki, T.3    Parrack, P.4    Fujita, N.5    Ishihama, A.6    Adhya, S.7
  • 6
    • 0031663158 scopus 로고    scopus 로고
    • Demonstration that the TyrR protein and RNA polymerase complex formed at the divergent P3 promoter inhibits binding of RNA polymerase to the major promoter, P1, of the aroP gene of Escherichia coli
    • Wang, P., Yang, J., Ishihama, A. and Pittard, A.J. (1998) Demonstration that the TyrR protein and RNA polymerase complex formed at the divergent P3 promoter inhibits binding of RNA polymerase to the major promoter, P1, of the aroP gene of Escherichia coli. J. Bacteriol., 180, 5466-5472. (Pubitemid 28471548)
    • (1998) Journal of Bacteriology , vol.180 , Issue.20 , pp. 5466-5472
    • Wang, P.1    Yang, J.2    Ishihama, A.3    Pittard, A.J.4
  • 7
    • 19444377759 scopus 로고    scopus 로고
    • Transcriptional interference-a crash course
    • Shearwin, K.E., Callen, B.P. and Egan, J.B. (2005) Transcriptional interference-a crash course. Trends Genet., 21, 339-345.
    • (2005) Trends Genet , vol.21 , pp. 339-345
    • Shearwin, K.E.1    Callen, B.P.2    Egan, J.B.3
  • 8
    • 0027339652 scopus 로고
    • Interference by P(R)-bound RNA polymerase with P(RM) function in vitro. Modulation by the bacteriophage λ cI protein
    • Hershberger, P.A., Mita, B.C., Tripatara, A. and deHaseth, P.L. (1993) Interference by PR-bound RNA polymerase with PRM function in vitro. Modulation by the bacteriophage lambda cI protein. J. Biol. Chem., 268, 8943-8948. (Pubitemid 23118688)
    • (1993) Journal of Biological Chemistry , vol.268 , Issue.12 , pp. 8943-8948
    • Hershberger, P.A.1    Mita, B.C.2    Tripatara, A.3    DeHaseth, P.L.4
  • 10
    • 0037102173 scopus 로고    scopus 로고
    • Operator-bound GalR dimers close DNA loops by direct interaction: Tetramerization and inducer binding
    • Semsey, S., Geanacopoulos, M., Lewis, D.E. and Adhya, S. (2002) Operator-bound GalR dimers close DNA loops by direct interaction: tetramerization and inducer binding. EMBO J., 21, 4349-4356.
    • (2002) EMBO J , vol.21 , pp. 4349-4356
    • Semsey, S.1    Geanacopoulos, M.2    Lewis, D.E.3    Adhya, S.4
  • 12
    • 0025369026 scopus 로고
    • Topography of intermediates in transcription initiation of E.coli
    • Schickor, P., Metzger, W., Werel, W., Lederer, H. and Heumann, H. (1990) Topography of intermediates in transcription initiation of E.coli. EMBO J., 9, 2215-2220.
    • (1990) EMBO J , vol.9 , pp. 2215-2220
    • Schickor, P.1    Metzger, W.2    Werel, W.3    Lederer, H.4    Heumann, H.5
  • 13
    • 78449301921 scopus 로고    scopus 로고
    • Widespread antisense transcription in Escherichia coli
    • Dornenburg, J.E., Devita, A.M., Palumbo, M.J. and Wade, J.T. (2010) Widespread antisense transcription in Escherichia coli. MBio, 1, pii: e00024-10.
    • (2010) MBio , vol.1
    • Dornenburg, J.E.1    Devita, A.M.2    Palumbo, M.J.3    Wade, J.T.4
  • 14
    • 33751534830 scopus 로고    scopus 로고
    • The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting
    • DOI 10.1016/j.molcel.2006.10.030, PII S1097276506007386
    • Reppas, N.B., Wade, J.T., Church, G.M. and Struhl, K. (2006) The transition between transcriptional initiation and elongation in E. coli is highly variable and often rate limiting. Mol. Cell, 24, 747-757. (Pubitemid 44839217)
    • (2006) Molecular Cell , vol.24 , Issue.5 , pp. 747-757
    • Reppas, N.B.1    Wade, J.T.2    Church, GeorgeM.3    Struhl, K.4
  • 15
    • 66449107633 scopus 로고    scopus 로고
    • Potent transcriptional interference by pausing of RNA polymerases over a downstream promoter
    • Palmer, A.C., Ahlgren-Berg, A., Egan, J.B., Dodd, I.B. and Shearwin, K.E. (2009) Potent transcriptional interference by pausing of RNA polymerases over a downstream promoter. Mol. Cell, 34, 545-555.
    • (2009) Mol. Cell , vol.34 , pp. 545-555
    • Palmer, A.C.1    Ahlgren-Berg, A.2    Egan, J.B.3    Dodd, I.B.4    Shearwin, K.E.5
  • 16
    • 12544251077 scopus 로고    scopus 로고
    • A mathematical model for transcriptional interference by RNA polymerase traffic in Escherichia coli
    • Sneppen, K., Dodd, I.B., Shearwin, K.E., Palmer, A.C., Schubert, R.A., Callen, B.P. and Egan, J.B. (2005) A mathematical model for transcriptional interference by RNA polymerase traffic in Escherichia coli. J. Mol. Biol., 346, 399-409.
    • (2005) J. Mol. Biol. , vol.346 , pp. 399-409
    • Sneppen, K.1    Dodd, I.B.2    Shearwin, K.E.3    Palmer, A.C.4    Schubert, R.A.5    Callen, B.P.6    Egan, J.B.7
  • 17
    • 54249116230 scopus 로고
    • Genetic regulatory mechanisms in the synthesis of proteins
    • Jacob, F. and Monod, J. (1961) Genetic regulatory mechanisms in the synthesis of proteins. J. Mol. Biol., 3, 318-356.
    • (1961) J. Mol. Biol. , vol.3 , pp. 318-356
    • Jacob, F.1    Monod, J.2
  • 18
    • 0032569960 scopus 로고    scopus 로고
    • GalR-mediated repression and activation of hybrid lacUV5 promoter: Differential contacts with RNA polymerase
    • DOI 10.1016/S0378-1119(98)00237-6, PII S0378111998002376
    • Ryu, S., Fujita, N., Ishihama, A. and Adhya, S. (1998) GalR-mediated repression and activation of hybrid lacUV5 promoter: differential contacts with RNA polymerase. Gene, 223, 235-245. (Pubitemid 29015932)
    • (1998) Gene , vol.223 , Issue.1-2 , pp. 235-245
    • Ryu, S.1    Fujita, N.2    Ishihama, A.3    Adhya, S.4
  • 19
    • 0344953582 scopus 로고    scopus 로고
    • In vitro studies of transcript initiation by Escherichia coli RNA polymerase. 3. Influences of individual DNA elements within the promoter recognition region on abortive initiation and promoter escape
    • DOI 10.1021/bi026962v
    • Vo, N.V., Hsu, L.M., Kane, C.M. and Chamberlin, M.J. (2003) In vitro studies of transcript initiation by Escherichia coli RNA polymerase. 3. Influences of individual DNA elements within the promoter recognition region on abortive initiation and promoter escape. Biochemistry, 42, 3798-3811. (Pubitemid 36402673)
    • (2003) Biochemistry , vol.42 , Issue.13 , pp. 3798-3811
    • Vo, N.V.1    Hsu, L.M.2    Kane, C.M.3    Chamberlin, M.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.