Discrimination of marine algal taxonomic groups using delayed fluorescence spectroscopy

Environmental and Experimental Botany

Volumn 73, Issue 1, 2011, Pages 42-48

  Drinovec, Luka ^a   Flander Putrle, Vesna ^b   Knez, Mitja ^a   Beran, Alfred ^c   Berden Zrimec, Maja ^a  

^a Institute of Physical Biology   (Slovenia)

^b NIB   (Slovenia)

^c ISTITUTO NAZIONALE DI OCEANOGRAFIA E DI GEOFISICA SPERIMENTALE OGS   (Italy)

Author keywords

CHEMTAX; Delayed fluorescence; HPLC; Phytoplankton; Pigments

Indexed keywords

ALGA; BIVALVE; CELL ORGANELLE; COMMUNITY COMPOSITION; COMMUNITY STRUCTURE; CYANOBACTERIUM; DATA SET; DEVELOPMENTAL BIOLOGY; DIATOM; DINOFLAGELLATE; DISCRIMINANT ANALYSIS; FLUORESCENCE; MARINE ENVIRONMENT; PHOTOSYNTHESIS; PHYTOPLANKTON; PIGMENT; SOFTWARE; SPECTRAL ANALYSIS; SPECTROMETRY; SPECTROSCOPY; TAXONOMY;

ALGAE; BACILLARIOPHYTA; CRYPTOPHYTA; CYANOBACTERIA; DINOPHYCEAE; HAPTOPHYCEAE; ISOCHRYSIS GALBANA; MICROMONAS (GREEN ALGA); PRASINOPHYCEAE; PROROCENTRUM MINIMUM; SKELETONEMA COSTATUM; SYNECHOCOCCUS; SYNECHOCOCCUS SP.; TELEAULAX;

EID: 80052501997     PISSN: 00988472     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.envexpbot.2010.10.010     Document Type: Article

References (33)

1. Agatha S., Strüder-Kypke M.S., Beran A. Morphological and genetic variability in the marine planktonic ciliate Laboea strobila Lohmann, 1908 (Ciliophora, Oligotrichia), with notes on its ontogenesis. J. Euk. Microbiol. 2004, 5:267-282.
2. Arnold W., Davidson J.B. The identity of the fluorescent and delayed light emission spectra in Chlorella. J. Gen. Physiol. 1954, 37:677-684.
3. Barlow R.G., Mantoura R.F.C., Gough M.A., Fileman T.W. Pigment signatures of the phytoplankton composition in the Northeastern Atlantic during the 1990 spring bloom. Deep-Sea Res. II-Top. Stud. Oceanogr. 1993, 40:459-477.
4. Bautista J.A., Connors R.E., Raju B.B., Hiller R.G., Sharples F.P., Gosztola D., Wasielewski M.R., Frank H.A. Excited state properties of peridin: observation of a solvent dependence of the lowest excited singlet state lifetime and spectral behavior unique among carotenoids. J. Phys. Chem. B 1999, 103(41):8751-8758.
5. Beeler SooHoo J., Kiefer D.A., Collins D.J., McDermid I.S. In vivo fluorescence excitation and absorption spectra of marine phytoplankton: I. Taxonomic characteristics and responses to photoadaptation. J. Plankton Res. 1985, 8:197-214.
6. Berden-Zrimec, M., Drinovec, L., Zrimec, A., 2010. Delayed fluorescence. In: Sugget, D.J., Prasil, O., Borowitzka, M. (Eds.), Chlorophyll a Fluorescence in Aquatic Sciences: Methods and Applications. Springer, Dordrecht, pp. 293-309.
7. Bertsch W.F. Two photoreactions in photosynthesis: evidence from delayed light emission of Chlorella. Proc. Natl. Acad. Sci. U.S.A. 1962, 48:2000-2004.
8. Beutler M., Wiltshire K.H., Reineke C., Hansen U.P. Algorithms and practical fluorescence models of the photosynthetic apparatus of red cyanobacteria and Cryptophyta designed for the fluorescence detection of red cyanobacteria and cryptophytes. Aquat. Microb. Ecol. 2004, 35:115-129.
9. Eker-Develi E., Berthon J.-F., van der Linde D. Phytoplankton class determination by microscopic and HPLC-CHEMTAX analyses in the southern Baltic Sea. Mar. Ecol., Prog. Ser. 2008, 359:87.
10. Gerhardt V., Bodemer U. Delayed fluorescence excitation spectroscopy-an in vivo method to determine photosynthetically active pigments and phytoplankton composition. ALGAS 2005, 33:4-17.
11. Greisberger S., Teubner K. Does pigment composition reflect phytoplankton community structure in differing temperature and light conditions in a deep alpine lake? An approach using HPLC and delayed fluorescence techniques. J. Phycol. 2007, 43:1108-1119.
12. Guillard R.R.L. Culture of phytoplankton for feeding marine invertebrates. Culture of Marine Invertebrate Animals 1975, 29-60. Plenum Press, New York. W.L. Smith, M.H. Chanley (Eds.).
13. Haxo F.T., Blinks L.R. Photosynthetic action spectra of marine algae. J. Gen. Physiol. 1950, 33(4):389-422.
14. Irigoien X., Meyer B., Harris R., Harbour D. Using HPLC pigment analysis to investigate phytoplankton taxonomy: the importance of knowing your species. Helgol. Mar. Res. 2004, 58:77-82.
15. Istvanovics V., Honti M., Osztoics A., Shafik H.M., Padisak J., Yacobi Y., Eckert W. Continuous monitoring of phytoplankton dynamics in Lake Balaton (Hungary) using on-line delayed fluorescence excitation spectroscopy. Freshw. Biol. 2005, 50:1950-1970.
16. Jeffrey S.W. Purification and properties of chlorophyll c from Sargassum flavicans. Biochem. J. 1963, 86(2):313-318.
17. Joliot P., Joliot A., Bouges B., Barbieri G. Studies of system-II photocenters by comparative measurements of luminescence, fluorescence, and oxygen emission. Photochem. Photobiol. 1971, 14:287-305.
18. Jursinic P.A. Delayed fluorescence: current concepts and status. Light Emission by Plant and Bacteria 1986, 291-328. Academic Press, New York. Govindjee, D.C. Fork (Eds.).
19. Krause H., Gerhardt V. Application of delayed fluorescence of phytoplankton in limnology and oceanography. J. Lumin. 1984, 31-2:888-891.
20. Larkum A.W. Light-harvesting systems in algae. Advances in Photosynthesis and Respiration. Photosynthesis in Algae 2003, 277-304. Kluwer Academic Publishers, Dordrecht, The Netherlands. A.W. Larkum, S.E. Douglas, J.A. Raven (Eds.).
21. Lewitus A.J., White D.L., Tymowski R.G., Geesey M.E., Hymel S.N., Noble P.A. Adapting the CHEMTAX method for assessing phytoplankton taxonomic composition in southeastern U.S. estuaries. Estuaries 2005, 28:160-172.
22. Mackey M.D., Mackey D.J., Higgins H.W., Wright S.W. CHEMTAX-a program for estimating class abundances from chemical markers: application to HPLC measurements of phytoplankton. Mar. Ecol., Prog. Ser. 1996, 144:265-283.
23. Mantoura R.F.C., Llewellyn C.A. The rapid-determination of algal chlorophyll and carotenoid-pigments and their breakdown products in natural-waters by reverse-phase high-performance liquid-chromatography. Anal. Chim. Acta 1983, 151:297-314.
24. Muylaert K., Gonzales R., Franck M., Lionard M. Spatial variation in phytoplankton dynamics in the Belgian coastal zone of the North Sea studied by microscopy, HPLC-CHEMTAX and underway fluorescence recordings. J. Sea Res. 2006, 55:265.
25. Rodriguez F., Varela M., Zapata M. Phytoplankton assemblages in the Gerlache and Bransfield Straits (Antarctic Peninsula) determined by light microscopy and CHEMTAX analysis of HPLC pigment data. Deep-Sea Res. II 2002, 49:723-747.
26. Rutherford A.W., Inoue Y. Oscillation of delayed luminescence from PSII recombination of S2QB- and S3QB- FEBS Lett. 1984, 165:163-170.
27. Schluter L., Mohlenberg F., Havskum H., Larsen S. The use of phytoplankton pigments for identifying and quantifying phytoplankton groups in coastal areas: testing the influence of light and nutrients on pigment/chlorophyll a ratios. Marine Ecology Progress Series 2000, 192:49-63.
28. Shima S., Ilagan R.P., Gillespie N., Sommer B.J., Hiller R.G., Sharples F.P., Frank H.A., Birge R.R. Two-photon and fluorescence spectroscopy and the effect of environment on the photochemical properties of peridinin in solution and in the peridinin-chlorophyll-protein from Amphidinium carterae. J. Phys. Chem. A 2003, 107(40):8052-8066.
29. Strain H.H., Thomas M.R., Katz J.J. Spectral absorption properties of ordinary and fully deuteriated chlorophylls a and b. Biochim. Biophys. Acta 1963, 75:306-311.
30. Strehler B.L., Arnold W. Light production by green plants. J. Gen. Physiol. 1951, 34:809-820.
31. Xu H., Vavilin D., Vermaas W. Chlorophyll b can serve as the major pigment in functional photosystem II complexes of cyanobacteria. Proc. Natl. Acad. Sci. U.S.A. 2001, 98(24):14168-14173.
32. Yacobi Y.Z., Gerhardt V., Gonen-Zurgil Y., Sukenik A. Delayed fluorescence excitation spectroscopy: a rapid method for qualitative and quantitative assessment of natural population of phytoplankton. Water Res. 1998, 32:2577-2582.
33. Zrimec A., Drinovec L., Berden-Zrimec M. Influence of chemical and physical factors on long-term delayed fluorescence in Dunaliella tertiolecta. Electromagn. Biol. Med. 2005, 24:309-318.