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Volumn 181, Issue 3, 2011, Pages 305-322

Development of gene-based markers from functional Arabidopsis thaliana genes involved in phosphorus homeostasis and mapping in Brassica napus

Author keywords

Brassica napus; Comparative genetic analysis; Gene based marker; P homeostasis; RIL population; SSR

Indexed keywords

ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; BACTERIA (MICROORGANISMS); BRASSICA NAPUS;

EID: 80052483172     PISSN: 00142336     EISSN: 15735060     Source Type: Journal    
DOI: 10.1007/s10681-011-0428-8     Document Type: Article
Times cited : (12)

References (55)
  • 3
    • 33745960196 scopus 로고    scopus 로고
    • PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants
    • Bari R, Pant BD, Stitt M, Scheible W (2006) PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants. Plant Physiol 141: 988-999.
    • (2006) Plant Physiol , vol.141 , pp. 988-999
    • Bari, R.1    Pant, B.D.2    Stitt, M.3    Scheible, W.4
  • 4
    • 0033150336 scopus 로고    scopus 로고
    • Development of amplified consensus genetic markers (ACGM) in Brassica napus from Arabidopsis thaliana sequences of known biological function
    • Brunel D, Froger N, Pelletier G (1999) Development of amplified consensus genetic markers (ACGM) in Brassica napus from Arabidopsis thaliana sequences of known biological function. Genome 42: 387-402.
    • (1999) Genome , vol.42 , pp. 387-402
    • Brunel, D.1    Froger, N.2    Pelletier, G.3
  • 5
    • 0032007431 scopus 로고    scopus 로고
    • Collinearity between a 30-centimorgan segment of Arabidopsis thaliana chromosome 4 and duplicated regions within the Brassica napus genome
    • Cavell AC, Lydiate DJ, Parkin IA, Dean C, Trick M (1998) Collinearity between a 30-centimorgan segment of Arabidopsis thaliana chromosome 4 and duplicated regions within the Brassica napus genome. Genome 41: 62-69.
    • (1998) Genome , vol.41 , pp. 62-69
    • Cavell, A.C.1    Lydiate, D.J.2    Parkin, I.A.3    Dean, C.4    Trick, M.5
  • 6
    • 34347266894 scopus 로고    scopus 로고
    • BHLH32 modulates several biochemical and morphological processes that respond to Pi starvation in Arabidopsis
    • Chen ZH, Nimmo GA, Jenkins GI, Nimmo HG (2007) BHLH32 modulates several biochemical and morphological processes that respond to Pi starvation in Arabidopsis. Biochem J 405: 191-198.
    • (2007) Biochem J , vol.405 , pp. 191-198
    • Chen, Z.H.1    Nimmo, G.A.2    Jenkins, G.I.3    Nimmo, H.G.4
  • 8
    • 34249817103 scopus 로고    scopus 로고
    • WRKY75 transcription factor is a modulator of phosphate acquisition and root development in Arabidopsis
    • Devaiah BN, Karthikeyan AS, Raghothama KG (2007a) WRKY75 transcription factor is a modulator of phosphate acquisition and root development in Arabidopsis. Plant Physiol 143: 1789-1801.
    • (2007) Plant Physiol , vol.143 , pp. 1789-1801
    • Devaiah, B.N.1    Karthikeyan, A.S.2    Raghothama, K.G.3
  • 9
    • 34548666180 scopus 로고    scopus 로고
    • Phosphate homeostasis and root development in Arabidopsis are synchronized by the zing finger transcription factor ZAT6
    • Devaiah BN, Nagarajna VK, Raghothama KG (2007b) Phosphate homeostasis and root development in Arabidopsis are synchronized by the zing finger transcription factor ZAT6. Plant Physiol 145: 147-159.
    • (2007) Plant Physiol , vol.145 , pp. 147-159
    • Devaiah, B.N.1    Nagarajna, V.K.2    Raghothama, K.G.3
  • 10
    • 73249115811 scopus 로고    scopus 로고
    • Phosphate starvation responses and gibberellic acid biosynthesis are regulated by the MYB62 transcription factor in Arabidopsis
    • Devaiah BN, Madhuvanthi R, Karthikeyan AS, Raghothama KG (2009) Phosphate starvation responses and gibberellic acid biosynthesis are regulated by the MYB62 transcription factor in Arabidopsis. Mol Plant 2: 43-58.
    • (2009) Mol Plant , vol.2 , pp. 43-58
    • Devaiah, B.N.1    Madhuvanthi, R.2    Karthikeyan, A.S.3    Raghothama, K.G.4
  • 11
    • 77953818424 scopus 로고    scopus 로고
    • Quantitative trait loci affecting seed mineral concentrations in Brassica napus grown with contrasting phosphorus supplies
    • Ding GD, Yang M, Hu YF, Liao Y, Shi L, Xu FS, Meng JL (2010) Quantitative trait loci affecting seed mineral concentrations in Brassica napus grown with contrasting phosphorus supplies. Ann Bot (Lond) 105: 1221-1234.
    • (2010) Ann Bot (Lond) , vol.105 , pp. 1221-1234
    • Ding, G.D.1    Yang, M.2    Hu, Y.F.3    Liao, Y.4    Shi, L.5    Xu, F.S.6    Meng, J.L.7
  • 12
    • 51949103799 scopus 로고    scopus 로고
    • Phosphate starvation signaling: a threesome controls systemic Pi homeostasis
    • Doerner P (2008) Phosphate starvation signaling: a threesome controls systemic Pi homeostasis. Curr Opin Plant Biol 11: 536-540.
    • (2008) Curr Opin Plant Biol , vol.11 , pp. 536-540
    • Doerner, P.1
  • 13
    • 44849090668 scopus 로고    scopus 로고
    • Characterization of a sub-family of Arabidopsis genes with the SPX domain reveals their diverse functions in plant tolerance to phosphorus starvation
    • Duan K, Yi K, Dang L, Huang H, Wu W, Wu P (2008) Characterization of a sub-family of Arabidopsis genes with the SPX domain reveals their diverse functions in plant tolerance to phosphorus starvation. Plant J 54: 965-975.
    • (2008) Plant J , vol.54 , pp. 965-975
    • Duan, K.1    Yi, K.2    Dang, L.3    Huang, H.4    Wu, W.5    Wu, P.6
  • 14
    • 70449371922 scopus 로고    scopus 로고
    • Identification of phosphorous efficient germplasm in oilseed rape
    • Duan HY, Shi L, Ye XS, Wang YH, Xu FS (2009) Identification of phosphorous efficient germplasm in oilseed rape. J Plant Nutr 32: 1148-1163.
    • (2009) J Plant Nutr , vol.32 , pp. 1148-1163
    • Duan, H.Y.1    Shi, L.2    Ye, X.S.3    Wang, Y.H.4    Xu, F.S.5
  • 15
    • 57749178408 scopus 로고    scopus 로고
    • Phosphate signaling in Arabidopsis and Oryza sativa
    • Fang ZY, Shao C, Meng YJ, Wu P, Chen M (2009) Phosphate signaling in Arabidopsis and Oryza sativa. Plant Sci 176: 170-180.
    • (2009) Plant Sci , vol.176 , pp. 170-180
    • Fang, Z.Y.1    Shao, C.2    Meng, Y.J.3    Wu, P.4    Chen, M.5
  • 17
    • 0034094869 scopus 로고    scopus 로고
    • The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat
    • Gupta PK, Varshney RK (2000) The development and use of microsatellite markers for genetic analysis and plant breeding with emphasis on bread wheat. Euphytica 113: 163-185.
    • (2000) Euphytica , vol.113 , pp. 163-185
    • Gupta, P.K.1    Varshney, R.K.2
  • 18
    • 0035999376 scopus 로고    scopus 로고
    • Identification and characterization of the Arabidopsis PHO1 gene involved in phosphate loading to the xylem
    • Hamburger D, Rezzonico E, Pere′tot JMC, Somerville C, Poirier Y (2002) Identification and characterization of the Arabidopsis PHO1 gene involved in phosphate loading to the xylem. Plant Cell 14: 889-902.
    • (2002) Plant Cell , vol.14 , pp. 889-902
    • Hamburger, D.1    Rezzonico, E.2    Peretot, J.M.C.3    Somerville, C.4    Poirier, Y.5
  • 21
    • 0002902693 scopus 로고
    • Simple plant DNA isolation procedure
    • J. Beckman and T. C. Osborn (Eds.), The Netherlands: Kluwer Academic Publishers
    • Kidwell KK, Osborn TC (1992) Simple plant DNA isolation procedure. In: Beckman J, Osborn TC (eds) Plant genomes: methods for genetic and physical mapping. Kluwer Academic Publishers, The Netherlands, pp 1-13.
    • (1992) Plant Genomes: Methods for Genetic and Physical Mapping , pp. 1-13
    • Kidwell, K.K.1    Osborn, T.C.2
  • 23
    • 0000732266 scopus 로고
    • The estimation of map distance from recombination values
    • Kosambi DD (1944) The estimation of map distance from recombination values. Ann Eugen 12: 172-175.
    • (1944) Ann Eugen , vol.12 , pp. 172-175
    • Kosambi, D.D.1
  • 24
    • 33845356341 scopus 로고    scopus 로고
    • Construction of a molecular functional map of rapeseed (Brassica napus L.) using differentially expressed genes between hybrid and its parents
    • Li YY, Ma CZ, Fu TD, Yang GS, Tu JX, Chen QF, Wang TH, Zhang XG, Li CY (2006) Construction of a molecular functional map of rapeseed (Brassica napus L.) using differentially expressed genes between hybrid and its parents. Euphytica 152: 25-39.
    • (2006) Euphytica , vol.152 , pp. 25-39
    • Li, Y.Y.1    Ma, C.Z.2    Fu, T.D.3    Yang, G.S.4    Tu, J.X.5    Chen, Q.F.6    Wang, T.H.7    Zhang, X.G.8    Li, C.Y.9
  • 26
    • 67349102350 scopus 로고    scopus 로고
    • Analysis of genetic factors that control shoot mineral concentrations in rapeseed (Brassica napus) in different boron environments
    • Liu J, Yang JP, Li RY, Shi L, Zhang CY, Long Y, Xu FS, Meng JL (2009) Analysis of genetic factors that control shoot mineral concentrations in rapeseed (Brassica napus) in different boron environments. Plant Soil 320: 255-266.
    • (2009) Plant Soil , vol.320 , pp. 255-266
    • Liu, J.1    Yang, J.P.2    Li, R.Y.3    Shi, L.4    Zhang, C.Y.5    Long, Y.6    Xu, F.S.7    Meng, J.L.8
  • 28
    • 2142727348 scopus 로고    scopus 로고
    • Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species
    • Lowe A, Moule C, Trick M, Edwards K (2004) Efficient large-scale development of microsatellites for marker and mapping applications in Brassica crop species. Theor Appl Genet 108: 1103-1112.
    • (2004) Theor Appl Genet , vol.108 , pp. 1103-1112
    • Lowe, A.1    Moule, C.2    Trick, M.3    Edwards, K.4
  • 33
    • 33846401178 scopus 로고    scopus 로고
    • Genome-wide analysis of the Arabidopsis leaf transcriptome reveals interaction of phosphate and sugar metabolism
    • Müller R, Morant M, Jarmer H, Nilsson L, Nielsen TH (2007) Genome-wide analysis of the Arabidopsis leaf transcriptome reveals interaction of phosphate and sugar metabolism. Plant Physiol 143: 156-171.
    • (2007) Plant Physiol , vol.143 , pp. 156-171
    • Müller, R.1    Morant, M.2    Jarmer, H.3    Nilsson, L.4    Nielsen, T.H.5
  • 34
    • 35648965695 scopus 로고    scopus 로고
    • Increased expression of the MYB-related transcription factor, PHR1, leads to enhanced phosphate uptake in Arabidopsis thaliana
    • Nilsson L, Müller R, Nielsen TH (2007) Increased expression of the MYB-related transcription factor, PHR1, leads to enhanced phosphate uptake in Arabidopsis thaliana. Plant Cell Environ 30: 1499-1512.
    • (2007) Plant Cell Environ , vol.30 , pp. 1499-1512
    • Nilsson, L.1    Müller, R.2    Nielsen, T.H.3
  • 35
    • 41549133928 scopus 로고    scopus 로고
    • Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A,B and C Brassica genomes
    • Panjabi P, Jagannath A, Bisht NC, Padmaja KL, Sharma S, Gupta V, Pradhan AK, Pental D (2008) Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. BMC Genomics 9: 113.
    • (2008) BMC Genomics , vol.9 , pp. 113
    • Panjabi, P.1    Jagannath, A.2    Bisht, N.C.3    Padmaja, K.L.4    Sharma, S.5    Gupta, V.6    Pradhan, A.K.7    Pental, D.8
  • 36
    • 31544442199 scopus 로고    scopus 로고
    • Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana
    • Parkin IAP, Gulden SM, Sharpe AG, Lukens L, Trick M, Osborn TC, Lydiate DJ (2005) Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana. Genetics 171: 765-781.
    • (2005) Genetics , vol.171 , pp. 765-781
    • Parkin, I.A.P.1    Gulden, S.M.2    Sharpe, A.G.3    Lukens, L.4    Trick, M.5    Osborn, T.C.6    Lydiate, D.J.7
  • 37
    • 0037833865 scopus 로고    scopus 로고
    • Phosphate transport and homeostasis in Arabidopsis
    • In: Somerville CR, Meyerowitz EM (eds) Rockville
    • Poirier Y, Bucher M (2002) Phosphate transport and homeostasis in Arabidopsis. In: Somerville CR, Meyerowitz EM (eds) The Arabidopsis book, American Society of Plant Biologists, Rockville. www. aspb/publications/arabidopsis/.
    • (2002) The Arabidopsis book, American Society of Plant Biologists,
    • Poirier, Y.1    Bucher, M.2
  • 40
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky H (2000) Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol 132: 365-386.
    • (2000) Methods Mol Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 41
    • 0035881704 scopus 로고    scopus 로고
    • A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae
    • Rubio V, Linhares F, Solano R, Martin AC, Iglesias J, Leyva A, Paz-Ares J (2001) A conserved MYB transcription factor involved in phosphate starvation signaling both in vascular plants and in unicellular algae. Gene Dev 15: 2122-2133.
    • (2001) Gene Dev , vol.15 , pp. 2122-2133
    • Rubio, V.1    Linhares, F.2    Solano, R.3    Martin, A.C.4    Iglesias, J.5    Leyva, A.6    Paz-Ares, J.7
  • 42
    • 0028116158 scopus 로고
    • Rapid silver staining and recovery of PCR products separated on polyacrylamide gels
    • Sanguinetti CJ, Dias Neto E, Simpson AJ (1994) Rapid silver staining and recovery of PCR products separated on polyacrylamide gels. Biotechniques 17: 914-921.
    • (1994) Biotechniques , vol.17 , pp. 914-921
    • Sanguinetti, C.J.1    Dias Neto, E.2    Simpson, A.J.3
  • 43
    • 33751014556 scopus 로고    scopus 로고
    • The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes
    • Schranz ME, Lysak MA, Mitchell-Olds T (2006) The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. Trends Plant Sci 11: 535-542.
    • (2006) Trends Plant Sci , vol.11 , pp. 535-542
    • Schranz, M.E.1    Lysak, M.A.2    Mitchell-Olds, T.3
  • 45
    • 0036954883 scopus 로고    scopus 로고
    • Isolation and characterization of microsatellites in Brassica rapa L
    • Suwabe K, Iketani H, Nunome T, Kage T, Hirai M (2002) Isolation and characterization of microsatellites in Brassica rapa L. Theor Appl Genet 104: 1092-1098.
    • (2002) Theor Appl Genet , vol.104 , pp. 1092-1098
    • Suwabe, K.1    Iketani, H.2    Nunome, T.3    Kage, T.4    Hirai, M.5
  • 46
    • 42449093604 scopus 로고    scopus 로고
    • Integration of Brassica A genome genetic linkage map between Brasscia napus and B. rapa
    • Suwabe K, Morgan C, Bancroft I (2008) Integration of Brassica A genome genetic linkage map between Brasscia napus and B. rapa. Genome 51: 169-176.
    • (2008) Genome , vol.51 , pp. 169-176
    • Suwabe, K.1    Morgan, C.2    Bancroft, I.3
  • 48
    • 61349097169 scopus 로고    scopus 로고
    • Involvement of OsSPX1 in phosphate homeostasis in rice
    • Wang C, Ying S, Huang HJ, Li K, Wu P, Shou HX (2009) Involvement of OsSPX1 in phosphate homeostasis in rice. Plant J 57: 895-904.
    • (2009) Plant J , vol.57 , pp. 895-904
    • Wang, C.1    Ying, S.2    Huang, H.J.3    Li, K.4    Wu, P.5    Shou, H.X.6
  • 49
    • 0038038594 scopus 로고    scopus 로고
    • Phosphate starvation triggers distinct alterations of genome expression in Arabidopsis roots and leaves
    • Wu P, Ma LG, Hou X, Wang M, Wu Y, Liu F, Deng XW (2003) Phosphate starvation triggers distinct alterations of genome expression in Arabidopsis roots and leaves. Plant Physiol 132: 1260-1271.
    • (2003) Plant Physiol , vol.132 , pp. 1260-1271
    • Wu, P.1    Ma, L.G.2    Hou, X.3    Wang, M.4    Wu, Y.5    Liu, F.6    Deng, X.W.7
  • 50
    • 49649091253 scopus 로고    scopus 로고
    • Mapping QTLs for mineral accumulation and shoot dry biomass under different Zn nutritional conditions in Chinese cabbage (Brassica rapa L. ssp. pekinensis)
    • Wu J, Yuan YX, Zhang XW, Zhao JJ, Song XF, Li Y, Li XN, Sun RF, Koornneef M, Aarts MGM, Wang XW (2008) Mapping QTLs for mineral accumulation and shoot dry biomass under different Zn nutritional conditions in Chinese cabbage (Brassica rapa L. ssp. pekinensis). Plant Soil 310: 25-40.
    • (2008) Plant Soil , vol.310 , pp. 25-40
    • Wu, J.1    Yuan, Y.X.2    Zhang, X.W.3    Zhao, J.J.4    Song, X.F.5    Li, Y.6    Li, X.N.7    Sun, R.F.8    Koornneef, M.9    Aarts, M.G.M.10    Wang, X.W.11
  • 51
    • 77950994391 scopus 로고    scopus 로고
    • Regulation of phosphate starvation responses in higher plants
    • Yang XJ, Finnegan PM (2010) Regulation of phosphate starvation responses in higher plants. Ann Bot 105: 513-526.
    • (2010) Ann Bot , vol.105 , pp. 513-526
    • Yang, X.J.1    Finnegan, P.M.2
  • 52
    • 77955490779 scopus 로고    scopus 로고
    • Quantitative trait loci for root morphology in response to low phosphorus stress in Brassica napus
    • Yang M, Ding GD, Shi L, Feng J, Xu FS, Meng JL (2010) Quantitative trait loci for root morphology in response to low phosphorus stress in Brassica napus. Theor Appl Genet 121: 181-193.
    • (2010) Theor Appl Genet , vol.121 , pp. 181-193
    • Yang, M.1    Ding, G.D.2    Shi, L.3    Feng, J.4    Xu, F.S.5    Meng, J.L.6
  • 53
    • 78651463152 scopus 로고    scopus 로고
    • Detection of QTL for phosphorus efficiency at vegetative stage in Brassica napus
    • Yang M, Ding GD, Shi L, Xu FS, Meng JL (2011) Detection of QTL for phosphorus efficiency at vegetative stage in Brassica napus. Plant Soil 339: 97-111.
    • (2011) Plant Soil , vol.339 , pp. 97-111
    • Yang, M.1    Ding, G.D.2    Shi, L.3    Xu, F.S.4    Meng, J.L.5
  • 54
    • 67349127917 scopus 로고    scopus 로고
    • Genotypic differences in phosphorus acquisition and the rhizosphere properties of Brassica napus in response to low phosphorus stress
    • Zhang HW, Huang Y, Ye XS, Shi L, Xu FS (2009) Genotypic differences in phosphorus acquisition and the rhizosphere properties of Brassica napus in response to low phosphorus stress. Plant Soil 320: 91-102.
    • (2009) Plant Soil , vol.320 , pp. 91-102
    • Zhang, H.W.1    Huang, Y.2    Ye, X.S.3    Shi, L.4    Xu, F.S.5


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