Molecular discrimination of six species of Bagrid catfishes from Indus river system using randomly amplified polymorphic DNA markers

Molecular Biology Reports

Volumn 38, Issue 5, 2011, Pages 2961-2965

  Saini, Archana ^a   Dua, Anish ^a   Mohindra, Vindhya ^b   Lakra, W S ^b  

^a GURU NANAK DEV UNIVERSITY   (India)

^b NATIONAL BUREAU OF FISH GENETIC RESOURCES   (India)

Author keywords

Bagridae; Indus river system; Mystus; Phylogeny; RAPD

Indexed keywords

ARTICLE; CATFISH; CONTROLLED STUDY; GENETIC DISTANCE; MOLECULAR PHYLOGENY; MYSTUS AOR; MYSTUS BLEEKERI; MYSTUS CAVASIUS; MYSTUS SEENGHALA; MYSTUS TENGARA; MYSTUS VITTATUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; RANDOM AMPLIFIED POLYMORPHIC DNA; RIVER; SPECIES DIFFERENCE; SPECIES IDENTIFICATION;

ANIMALS; CATFISHES; GENETIC MARKERS; INDIA; PHYLOGENY; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; RIVERS; SPECIES SPECIFICITY;

BAGRIDAE; MYSTUS; MYSTUS BLEEKERI; MYSTUS CAVASIUS; MYSTUS VITTATUS; PISCES;

EID: 80052466775     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-010-9960-1     Document Type: Article

References (24)

1. Talwar PK, Jhingran AG (1991) Inland fisheries of India and adjacent countries, vol 2. Oxford and IBH Publishing Co, New Delhi, India, pp 545-575
2. Tripathi SD (1996) Present status of breeding and culture of catfishes in South Asia. Aquat Living Resour 9:219-228
3. Yadev B (2006) Indian Fisheries. In: Fish and fisheries, II edn. Daya Publishing House, Delhi, India, pp 183-190
4. Jayaram KC (1955) A preliminary review of the genera of the family Bagridae (Pisces:Siluroidea). Proc Natl Inst Sci India 21B(3):120-128
5. Jayaram KC (1971) Contributions to the study of Bagrid fishes: generic status of Aorichthys Wu (Siluroidea: Bagridae). Proc Zool Soc Calcutta 24(2):149-156
6. Roberts TR (1994) Systematic revision of Asian Bagrid catfishes of the genus Mystus sensu stricto with a new species from Thailand and Combodia. Ichthyol Explor Freshw 5(3):241-256
7. Jayaram KC (2002) The fresh water fishes of the Indian region. Narendra publishing House, Delhi, India, pp 220-240
8. Froese R, Pauly D (2007) Fish base. World Wide Web electronic publication. www.fishbase.org. Version. Accessed Nov 2007
9. Bartish IV, Garkava LP, Rumpunen K, Nybom H (2000) Phylogentetic relationships and differentiation among and within populations of Chaenomeles Lindl. (Rosaceae) estimated with RAPDs and isozymes. Theor Appl Genet 101:554-561
10. Callejas C, Ochando MD (2001) Molecular identification (RAPD) of the eight species of the genus Barbus (Cyprinidae) in the Iberian Peninsula. J Fish Biol 59:1589-1599 (Pubitemid 34140207)
11. Mohindra V, Khare P, Lal KK, Peyush P, Singh KS, Barman AS, Lakra WS (2007) Molecular discrimination of five Mahseer species from Indian peninsula using RAPD analysis. Acta Zool Sin 53(4):725-732
12. Dinesh KR, Lim TM, Chua KL, Chan WK, Phang VPE (1993) RAPD analysis: an efficient method of DNA fingerprinting in fishes. Zool Sci 10:849-855
13. Johnson SL, Midson CN, Ballinger EW, Postlethwait JH (1994) Identification of RAPD primers that reveal extensive polymorphisms between laboratory strains of zebrafish. Genomics 19:152-156 (Pubitemid 24034380)
14. Foo CL, Dinesh KR, Lim TM, Chan WK, Phang VP (1995) Inheritance of RAPD markers in the guppy fish Poecilia reticulate. Zool Sci 12:535-541
15. Bielawski JP, Pumo DE (1997) Randomly amplified polymorphic DNA (RAPD) analysis of Atlantic Coast striped bass. Heredity 78:32-40 (Pubitemid 27052539)
16. Caccone A, Allegrucci G, Fortunato C, Sbordoni V (1997) Genetic differentiation within the European sea bass D. labrax as revealed by 14 RAPD-PCR assays. J Hered 88:316-324 (Pubitemid 27330327)
17. Cunningham CO, Mo TA (1997) Random amplified polymorphic DNA (RAPD) analysis of three Norwegian Gyrodactylus salaris populations Monogenea: Gyrodactylidae. J Parasitol 83:311-314 (Pubitemid 27167226)
18. Barman HK, Barat A, Yadav BM, Banerjee S, Meher PK, Reddy PVGK, Jana RK (2002) Genetic variation between four species of Indian major carps as revealed by random amplified polymorphic DNA assay. Aquaculture 217(1-4):115-123
19. Bardakci F (2001) Random amplified polymorphic DNA (RAPD) markers. Turk J Biol 25:185-196
20. Ruzzante DE, Taggart CT, Cook D, Goddard S (1996) Genetic differentiation between inshore and offshore Atlantic cod (Gadus morhua) off Newfoundland: microsatellite DNA variation and antifreeze level. Can J Fish Aquat Sci 53:634-645 (Pubitemid 26310279)
21. Miller MP (1997) Tools for population genetic analysis (TFPGA, 1.3). A windows program for analysis of allozyme and molecular population genetic data. Computer software distributed by the authors. www.marksgeneticsoftware.net/ tfpga.htm
22. Phale SR, Chauhan S, Bhute YV, Baile VV (2009) Detection of genetic variation in the wild populations of Indian major carps using random amplified polymorphic DNA fingerprinting. J Fish Aquat Sci 4(1):63-70
23. Hadrys H, Balick M, Schierwater B (1992) Applications of random amplified polymorphic DNA (RAPD) in molecular ecology. Mol Ecol 1:55-63
24. Tianpei M (1991) Anatomy and systematics of Bagridae (Teleostei) and Siluroid phylogeny. Koeltz Scientific Books, Koenigstein, pp 124-137