Cloning and characterization of a wheat neutral ceramidase gene Ta-CDase

Molecular Biology Reports

Volumn 38, Issue 5, 2011, Pages 3447-3454

  Yu, Xiumei ^a,c   Wang, Xiaojie ^a   Huang, Xueling ^a   Buchenauer, Heinrich ^b   Han, Qingmei ^a   Guo, Jun ^a   Zhao, Jie ^a   Qu, Zhipeng ^a   Huang, Lili ^a   Kang, Zhensheng ^a  

^a NORTHWEST A F UNIVERSITY   (China)

^b UNIVERSITY OF HOHENHEIM   (Germany)

^c AGRICULTURAL UNIVERSITY OF HEBEI   (China)

Author keywords

Ceramidase; Sequence characterization; Transcript expression profile; Triticum aestivum

Indexed keywords

CERAMIDASE; COMPLEMENTARY DNA; SIGNAL PEPTIDE;

AMINO ACID SEQUENCE; ARTICLE; CHROMOSOME; CHROMOSOME 4D; CHROMOSOME 5A; CONTROLLED STUDY; DNA LIBRARY; GENE AMPLIFICATION; GENE DOSAGE; GENE EXPRESSION PROFILING; GENE LOCATION; GENETIC ANALYSIS; GENETIC SIMILARITY; GENOME SIZE; INOCULATION; ISOELECTRIC POINT; MOLECULAR CLONING; NEUTRAL CERAMIDASE GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PLANT GENE; PLANT LEAF; PROTEIN DOMAIN; PUCCINIA STRIIFORMIS; RAPID AMPLIFICATION OF COMPLEMENTARY DNA END; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; SEQUENCE HOMOLOGY; SOUTHERN BLOTTING; SPECIES COMPARISON; SUPPRESSION SUBTRACTIVE HYBRIDIZATION; WHEAT;

AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; BASIDIOMYCOTA; CERAMIDASES; CHROMOSOMES, PLANT; CLONING, MOLECULAR; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; IMMUNITY, INNATE; MOLECULAR SEQUENCE DATA; NEUTRAL CERAMIDASE; PHYLOGENY; PLANT DISEASES; SEQUENCE ALIGNMENT; SPHINGOSINE; TRITICUM;

ANIMALIA; PUCCINIA STRIIFORMIS F. SP. TRITICI; TRITICUM AESTIVUM;

EID: 80052440630     PISSN: 03014851     EISSN: 15734978     Source Type: Journal    
DOI: 10.1007/s11033-010-0454-y     Document Type: Article

References (35)

1. Mao C, Xu R, Szulc ZM, Bielawska A, Galadari SH, Obeid LM (2001) Cloning and characterization of a novel human alkaline ceramidase. J Biol Chem 276(28):26577-26588
2. Cuvillier O, Pirianov G, Kleuser B, Vanek PG, Coso OA, Gutkind JS, Spiegel S (1996) Suppression of ceramide-mediated programmed cell death by sphingosine-1-phosphate. Nature 381: 800-803 (Pubitemid 26243122)
3. Koch J, Gärtner S, Li CM, Quintern LE, Bernardo K, Levran O, Schnabel D, Desnick RJ, Schuchman EH, Sandhoff K (1996) Molecular cloning and characterization of a full-length complementary DNA encoding human acid ceramidase. J Biol Chem 271(51):33110-33115
4. Hu W, Xu RJ, Sun W, Szulc ZM, Bielawski J, Obeid LM, Mao CG (2010) Alkaline ceramidase 3 (ACER3) hydrolyzes unsaturated long-chain ceramides, and its down-regulation inhibits both cell proliferation and apoptosis. J Biol Chem 285(13):7964-7976
5. Nikolova-Karakashian M, Merrill AH (2000) Ceramidases. Methods Enzymol 311:194-201 (Pubitemid 29512765)
6. Bernardo K, Hurwitz R, Zenk T, Desnick RJ, Ferlinz K, Schuchman EH, Sandhoff K (1995) Purification, characterization, and biosynthesis of human acid ceramidase. J Biol Chem 270(19): 11098-11102
7. Chavez JA, Holland WL, Bär J, Sandhoff K, Summers SA (2005) Acid ceramidase overexpression prevents the inhibitory effects of saturated fatty acids on insulin signaling. J Biol Chem 280(20): 20148-20153 (Pubitemid 41379546)
8. Li CM, Hong SB, Kopal G, He X, Linke T, Hou WS, Koch J, Gatt S, Sandhoff K, Schuchman EH (1998) Cloning and characterization of the full-Length cDNA and genomic sequences encoding murine acid ceramidase. Genomics 50(2):267-274 (Pubitemid 28303521)
9. Tani M, Okino N, Mori K, Tanigawa T, Izu H, Ito M (2000) Molecular cloning of the full-length cDNA encoding mouse neutral ceramidase. J Biol Chem 275(15):11229-11234
10. Okino N, Ichinose S, Omori A, Imayama S, Nakamura T, Ito M (1999) Molecular cloning, sequencing, and expression of the Gene encoding alkaline ceramidase from Pseudomonas aeruginosa. J Biol Chem 274(51):36616-36622
11. Yoshimura Y, Tani M, Okino N, Iida H, Ito M (2004) Molecular cloning and functional analysis of zebrafish neutral ceramidase. J Biol Chem 279(42):44012-44022 (Pubitemid 39390710)
12. Mao C, Xu R, Bielawska A, Obeid LM (2000) Cloning of an Alkaline Ceramidase from Saccharomyces cerevisiae. J Biol Chem 275(10):6876-6884
13. El Bawab S, Roddy P, Qian T, Bielawska A, Lemasters JJ, Hannun YA (2000) Molecular cloning and characterization of a human mitochondrial ceramidase. J Biol Chem 275(28):21508-21513 (Pubitemid 30481855)
14. Mitsutake S, Tani M, Okino N, Mori K, Ichinose S, Omori A, Iida H, Nakamura T, Ito M (2001) Purification, characterization, molecular cloning, and subcellular distribution of neutral ceramidase of rat kidney. J Biol Chem 276(28):26249-26259
15. Dunn TM, Lynch DV, Michaelson LV, Napier JA (2004) A postgenomic approach to understanding sphingolipid metabolism in Arabidopsis thaliana. Ann Bot (Lond) 93(5):483-497 (Pubitemid 41295603)
16. Ng CK, Carr K, McAinsh MR, Powell B, Hetherington AM (2001) Drought-induced guard cell signal transduction involves sphingosine-1-phosphate. Nature 410(6828):596-599 (Pubitemid 32267205)
17. Pata MO, Wu BX, Bielawski J, Xiong TC, Hannun YA, Ng CKY (2008) Molecular cloning and characterization of OsCDase, a ceramidase enzyme from rice. Plant J 55(6):1000-1009
18. Yu XM, Yu XD, Qu ZP, Han QM, Guo J, Huang LL, Kang ZS (2007) Construction of wheat SSH cDNA library induced by Puccinia striiformis and analysis of expressed sequence tags. Acta Phytopathologica Sinica 37(1):50-55 (in Chinese)
19. Cao ZJ, Jing JX, Wang MN, Shang HS, Li ZQ (2003) Relation analysis of stripe rust resistance gene in wheat important cultivar suwon 11, suwon 92 and hybrid 46. Acta Bot Boreal Occident Sin 23:64-68 (in Chinese)
20. Li ZF, Xia XC, Zhou XC, Niu YC, He ZH, Zhang Y, Li GQ, Wan AM, Wang DS, Chen XM, Lu QL, Singh RP (2006) Seedling and slow rusting resistance to stripe rust in Chinese common wheat. Plant Dis 90:1302-1312 (Pubitemid 44434732)
21. Kang ZS, Li ZQ (1984) Discovery of a normal T type new pathogenic strain to Lovrin10. Acta Cllegii Septentrionali Occidentali Agriculturae 4:18-28 (in Chinese)
22. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor
23. Saghai-Maroof MA, Soliman KM, Jorgensen RA, Allard RW (1984) Ribosomal DNA spacer length polymorphisms in barley: Mendelian inheritance, chromosomal location and population dynamics. Proc Natl Acad Sci USA 81(24):8014-8018
24. Kyte J, Doolittle RF (1982) A simple method for displaying the hydropathic character of a protein. J Mol Biol 157:105-132
25. Zeidan YH, Jenkins RW, Korman JB, Liu X, Obeid LM, Norris JS, Hannun YA (2008) Molecular targeting of acid ceramidase: implications to cancer therapy. Curr Drug Targets 9(8):653-661 (9)
26. Hannun YA, Luberto C, Argraves KM (2001) Enzymes of sphingolipid metabolism: from modular to integrative signaling. Biochemistry 40(16):4893-4903 (Pubitemid 32332534)
27. Luberto C, Hannun YA (1999) Sphingolipid metabolism in the regulation of bioactive molecules. Lipids 34(S1):5-11
28. Obeid LM, Linardic CM, Karolak LA, Hannun YA (1993) Programmed cell death induced by ceramide. Science 259(5102): 1769-1771 (Pubitemid 23114667)
29. Spiegel S, Milstien S (2003) Sphingosine-1-phosphate: an enigmatic signaling lipid. Nature reviews. Mol Cell Biol 4:397-407
30. Jenkins GM, Richards A, Wahl T, Mao C, Obeid L, Hannun Y (1997) Involvement of yeast sphingolipids in the heat stress response of Saccharomyces cerevisiae. J Biol Chem 272(51): 32566-32572 (Pubitemid 28011945)
31. Obeid LM, Okamoto Y, Mao C (2002) Yeast sphingolipids: metabolism and biology. Biochim Biophys Acta 1585(2-3): 163-171 (Pubitemid 36092081)
32. Cheng J, Park TS, Chio LC, Fischl AS, Ye XS (2003) Induction of apoptosis by sphingoid long-chain bases in Aspergillus nidulans. Mol Cell Biol 23(1):163-177 (Pubitemid 36008510)
33. Luberto C, Toffaletti DL, Wills EA, Tucker SC, Casadevall A, Perfect JR, Hannun YA, Del Poeta M (2001) Roles for inositolphosphoryl ceramide synthase 1 (IPC1) in pathogenesis of Cryptococcus neoformans. Genes Dev 15:201-212 (Pubitemid 32107665)
34. Heung LJ, Luberto C, Del Poeta M (2006) Role of sphingolipids in microbial pathogenesis. Infect Immun 74(1):28-39 (Pubitemid 43023055)
35. Buchanan BB, Cruissem W, Jones RL (2000) Biochemistry and molecular biology of plants. American Society of Plant Physiologists, Rockville