-
1
-
-
17844371703
-
Biomarkers: Mining the biofluid proteome
-
DOI 10.1074/mcp.M500006-MCP200
-
Veenstra, T. D.; Conrads, T. P.; Hood, B. L.; Avellino, A. M.; Ellenbogen, R. G.; Morrison, R. S. Biomarkers: mining the biofluid proteome Mol. Cell. Proteomics 2005, 4 (4) 409-18 (Pubitemid 40590561)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.4
, pp. 409-418
-
-
Veenstra, T.D.1
Conrads, T.P.2
Hood, B.L.3
Avellino, A.M.4
Ellenbogen, R.G.5
Morrison, R.S.6
-
2
-
-
34047113404
-
Higher dimensional (Hi-D) separation strategies dramatically improve the potential for cancer biomarker detection in serum and plasma
-
DOI 10.1016/j.jchromb.2006.10.069, PII S1570023206008853
-
Hoffman, S. A.; Joo, W. A.; Echan, L. A.; Speicher, D. W. Higher dimensional (Hi-D) separation strategies dramatically improve the potential for cancer biomarker detection in serum and plasma J. Chromatogr., B: Anal. Technol. Biomed. Life Sci. 2007, 849 (1-2) 43-52 (Pubitemid 46529317)
-
(2007)
Journal of Chromatography B: Analytical Technologies in the Biomedical and Life Sciences
, vol.849
, Issue.1-2
, pp. 43-52
-
-
Hoffman, S.A.1
Joo, W.-A.2
Echan, L.A.3
Speicher, D.W.4
-
3
-
-
78649858218
-
Advances in proximal fluid proteomics for disease biomarker discovery
-
Teng, P. N.; Bateman, N. W.; Hood, B. L.; Conrads, T. P. Advances in proximal fluid proteomics for disease biomarker discovery J. Proteome Res. 2010, 9 (12) 6091-100
-
(2010)
J. Proteome Res.
, vol.9
, Issue.12
, pp. 6091-100
-
-
Teng, P.N.1
Bateman, N.W.2
Hood, B.L.3
Conrads, T.P.4
-
4
-
-
77956403452
-
Proteomics of colorectal cancer: Overview of discovery studies and identification of commonly identified cancer-associated proteins and candidate CRC serum markers
-
Jimenez, C. R.; Knol, J. C.; Meijer, G. A.; Fijneman, R. J. Proteomics of colorectal cancer: overview of discovery studies and identification of commonly identified cancer-associated proteins and candidate CRC serum markers J. Proteomics 2010, 73 (10) 1873-95
-
(2010)
J. Proteomics
, vol.73
, Issue.10
, pp. 1873-95
-
-
Jimenez, C.R.1
Knol, J.C.2
Meijer, G.A.3
Fijneman, R.J.4
-
5
-
-
77957755656
-
Secretome proteomics for discovery of cancer biomarkers
-
Makridakis, M.; Vlahou, A. Secretome proteomics for discovery of cancer biomarkers J. Proteomics 2010, 73 (12) 2291-305
-
(2010)
J. Proteomics
, vol.73
, Issue.12
, pp. 2291-305
-
-
Makridakis, M.1
Vlahou, A.2
-
6
-
-
77956417496
-
Advances in proteomic prostate cancer biomarker discovery
-
Goo, Y. A.; Goodlett, D. R. Advances in proteomic prostate cancer biomarker discovery J. Proteomics 2010, 73 (10) 1839-50
-
(2010)
J. Proteomics
, vol.73
, Issue.10
, pp. 1839-50
-
-
Goo, Y.A.1
Goodlett, D.R.2
-
7
-
-
33747030845
-
Protein biomarker discovery and validation: The long and uncertain path to clinical utility
-
DOI 10.1038/nbt1235, PII NBT1235
-
Rifai, N.; Gillette, M. A.; Carr, S. A. Protein biomarker discovery and validation: the long and uncertain path to clinical utility Nat. Biotechnol. 2006, 24 (8) 971-83 (Pubitemid 44215392)
-
(2006)
Nature Biotechnology
, vol.24
, Issue.8
, pp. 971-983
-
-
Rifai, N.1
Gillette, M.A.2
Carr, S.A.3
-
8
-
-
14844311934
-
Candidate-based proteomics in the search for biomarkers of cardiovascular disease
-
Anderson, L. Candidate-based proteomics in the search for biomarkers of cardiovascular disease J. Physiol. 2005, 563 (Pt 1) 23-60
-
(2005)
J. Physiol.
, vol.563
, Issue.PART 1
, pp. 23-60
-
-
Anderson, L.1
-
9
-
-
79951530395
-
On the development of plasma protein biomarkers
-
Surinova, S.; Schiess, R.; Huttenhain, R.; Cerciello, F.; Wollscheid, B.; Aebersold, R. On the development of plasma protein biomarkers J. Proteome Res. 2011, 10 (1) 5-16
-
(2011)
J. Proteome Res.
, vol.10
, Issue.1
, pp. 5-16
-
-
Surinova, S.1
Schiess, R.2
Huttenhain, R.3
Cerciello, F.4
Wollscheid, B.5
Aebersold, R.6
-
10
-
-
33645721632
-
Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
-
Anderson, L.; Hunter, C. L. Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins Mol. Cell. Proteomics 2006, 5 (4) 573-88
-
(2006)
Mol. Cell. Proteomics
, vol.5
, Issue.4
, pp. 573-88
-
-
Anderson, L.1
Hunter, C.L.2
-
11
-
-
77954523086
-
Options and considerations when selecting a quantitative proteomics strategy
-
Domon, B.; Aebersold, R. Options and considerations when selecting a quantitative proteomics strategy Nat. Biotechnol. 2010, 28 (7) 710-21
-
(2010)
Nat. Biotechnol.
, vol.28
, Issue.7
, pp. 710-21
-
-
Domon, B.1
Aebersold, R.2
-
12
-
-
35348863892
-
High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites
-
DOI 10.1074/mcp.M700132-MCP200
-
Stahl-Zeng, J.; Lange, V.; Ossola, R.; Eckhardt, K.; Krek, W.; Aebersold, R.; Domon, B. High sensitivity detection of plasma proteins by multiple reaction monitoring of N-glycosites Mol. Cell. Proteomics 2007, 6 (10) 1809-17 (Pubitemid 350031682)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.10
, pp. 1809-1817
-
-
Stahl-Zeng, J.1
Lange, V.2
Ossola, R.3
Eckhardt, K.4
Krek, W.5
Aebersold, R.6
Domon, B.7
-
13
-
-
4444301306
-
Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-MS/MS using protein cleavage and isotope dilution mass spectrometry
-
DOI 10.1021/pr049963d
-
Barnidge, D. R.; Goodmanson, M. K.; Klee, G. G.; Muddiman, D. C. Absolute quantification of the model biomarker prostate-specific antigen in serum by LC-Ms/MS using protein cleavage and isotope dilution mass spectrometry J. Proteome Res. 2004, 3 (3) 644-52 (Pubitemid 39207371)
-
(2004)
Journal of Proteome Research
, vol.3
, Issue.3
, pp. 644-652
-
-
Barnidge, D.R.1
Goodmanson, M.K.2
Klee, G.G.3
Muddiman, D.C.4
-
14
-
-
10244256354
-
Isotope dilution-mass spectrometric quantification of specific proteins: Model application with apolipoprotein A-I
-
Barr, J. R.; Maggio, V. L.; Patterson, D. G., Jr; Cooper, G. R.; Henderson, L. O.; Turner, W. E.; Smith, S. J.; Hannon, W. H.; Needham, L. L.; Sampson, E. J. Isotope dilution - mass spectrometric quantification of specific proteins: model application with apolipoprotein A-I Clin. Chem. 1996, 42 (10) 1676-82 (Pubitemid 26354748)
-
(1996)
Clinical Chemistry
, vol.42
, Issue.10
, pp. 1676-1682
-
-
Barr, J.R.1
Maggio, V.L.2
Patterson Jr., D.G.3
Cooper, G.R.4
Henderson, L.O.5
Turner, W.E.6
Smith, S.J.7
Hannon, W.H.8
Needham, L.L.9
Sampson, E.J.10
-
15
-
-
0346668199
-
Absolute quantification of the G protein-coupled receptor rhodopsin by LC/MS/MS using proteolysis product peptides and synthetic peptide standards
-
DOI 10.1021/ac026154+
-
Barnidge, D. R.; Dratz, E. A.; Martin, T.; Bonilla, L. E.; Moran, L. B.; Lindall, A. Absolute quantification of the G protein-coupled receptor rhodopsin by LC/MS/MS using proteolysis product peptides and synthetic peptide standards Anal. Chem. 2003, 75 (3) 445-51 (Pubitemid 36176714)
-
(2003)
Analytical Chemistry
, vol.75
, Issue.3
, pp. 445-451
-
-
Barnidge, D.R.1
Dratz, E.A.2
Martin, T.3
Bonilla, L.E.4
Moran, L.B.5
Lindall, A.6
-
16
-
-
0037795741
-
Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS
-
DOI 10.1073/pnas.0832254100
-
Gerber, S. A.; Rush, J.; Stemman, O.; Kirschner, M. W.; Gygi, S. P. Absolute quantification of proteins and phosphoproteins from cell lysates by tandem MS Proc. Natl. Acad. Sci. U.S.A. 2003, 100 (12) 6940-5 (Pubitemid 36706372)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.12
, pp. 6940-6945
-
-
Gerber, S.A.1
Rush, J.2
Stemman, O.3
Kirschner, M.W.4
Gygi, S.P.5
-
17
-
-
38349068918
-
Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution
-
Keshishian, H.; Addona, T.; Burgess, M.; Kuhn, E.; Carr, S. A. Quantitative, multiplexed assays for low abundance proteins in plasma by targeted mass spectrometry and stable isotope dilution Mol. Cell. Proteomics 2007, 6 (12) 2212-29
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.12
, pp. 2212-29
-
-
Keshishian, H.1
Addona, T.2
Burgess, M.3
Kuhn, E.4
Carr, S.A.5
-
18
-
-
55349139657
-
Quantification of thyroglobulin, a low-abundance serum protein, by immunoaffinity peptide enrichment and tandem mass spectrometry
-
Hoofnagle, A. N.; Becker, J. O.; Wener, M. H.; Heinecke, J. W. Quantification of thyroglobulin, a low-abundance serum protein, by immunoaffinity peptide enrichment and tandem mass spectrometry Clin. Chem. 2008, 54 (11) 1796-804
-
(2008)
Clin. Chem.
, vol.54
, Issue.11
, pp. 1796-804
-
-
Hoofnagle, A.N.1
Becker, J.O.2
Wener, M.H.3
Heinecke, J.W.4
-
19
-
-
71049187147
-
Quantification of cardiovascular biomarkers in patient plasma by targeted mass spectrometry and stable isotope dilution
-
Keshishian, H.; Addona, T.; Burgess, M.; Mani, D. R.; Shi, X.; Kuhn, E.; Sabatine, M. S.; Gerszten, R. E.; Carr, S. A. Quantification of cardiovascular biomarkers in patient plasma by targeted mass spectrometry and stable isotope dilution Mol. Cell. Proteomics 2009, 8 (10) 2339-49
-
(2009)
Mol. Cell. Proteomics
, vol.8
, Issue.10
, pp. 2339-49
-
-
Keshishian, H.1
Addona, T.2
Burgess, M.3
Mani, D.R.4
Shi, X.5
Kuhn, E.6
Sabatine, M.S.7
Gerszten, R.E.8
Carr, S.A.9
-
20
-
-
67650564834
-
Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma
-
Addona, T. A.; Abbatiello, S. E.; Schilling, B.; Skates, S. J.; Mani, D. R.; Bunk, D. M.; Spiegelman, C. H.; Zimmerman, L. J.; Ham, A. J.; Keshishian, H.; Hall, S. C.; Allen, S.; Blackman, R. K.; Borchers, C. H.; Buck, C.; Cardasis, H. L.; Cusack, M. P.; Dodder, N. G.; Gibson, B. W.; Held, J. M.; Hiltke, T.; Jackson, A.; Johansen, E. B.; Kinsinger, C. R.; Li, J.; Mesri, M.; Neubert, T. A.; Niles, R. K.; Pulsipher, T. C.; Ransohoff, D.; Rodriguez, H.; Rudnick, P. A.; Smith, D.; Tabb, D. L.; Tegeler, T. J.; Variyath, A. M.; Vega-Montoto, L. J.; Wahlander, A.; Waldemarson, S.; Wang, M.; Whiteaker, J. R.; Zhao, L.; Anderson, N. L.; Fisher, S. J.; Liebler, D. C.; Paulovich, A. G.; Regnier, F. E.; Tempst, P.; Carr, S. A. Multi-site assessment of the precision and reproducibility of multiple reaction monitoring-based measurements of proteins in plasma Nat. Biotechnol. 2009, 27 (7) 633-41
-
(2009)
Nat. Biotechnol.
, vol.27
, Issue.7
, pp. 633-41
-
-
Addona, T.A.1
Abbatiello, S.E.2
Schilling, B.3
Skates, S.J.4
Mani, D.R.5
Bunk, D.M.6
Spiegelman, C.H.7
Zimmerman, L.J.8
Ham, A.J.9
Keshishian, H.10
Hall, S.C.11
Allen, S.12
Blackman, R.K.13
Borchers, C.H.14
Buck, C.15
Cardasis, H.L.16
Cusack, M.P.17
Dodder, N.G.18
Gibson, B.W.19
Held, J.M.20
Hiltke, T.21
Jackson, A.22
Johansen, E.B.23
Kinsinger, C.R.24
Li, J.25
Mesri, M.26
Neubert, T.A.27
Niles, R.K.28
Pulsipher, T.C.29
Ransohoff, D.30
Rodriguez, H.31
Rudnick, P.A.32
Smith, D.33
Tabb, D.L.34
Tegeler, T.J.35
Variyath, A.M.36
Vega-Montoto, L.J.37
Wahlander, A.38
Waldemarson, S.39
Wang, M.40
Whiteaker, J.R.41
Zhao, L.42
Anderson, N.L.43
Fisher, S.J.44
Liebler, D.C.45
Paulovich, A.G.46
Regnier, F.E.47
Tempst, P.48
Carr, S.A.49
more..
-
21
-
-
38349037650
-
Isotope-labeled protein standards: Toward absolute quantitative proteomics
-
Brun, V.; Dupuis, A.; Adrait, A.; Marcellin, M.; Thomas, D.; Court, M.; Vandenesch, F.; Garin, J. Isotope-labeled protein standards: toward absolute quantitative proteomics Mol. Cell. Proteomics 2007, 6 (12) 2139-49
-
(2007)
Mol. Cell. Proteomics
, vol.6
, Issue.12
, pp. 2139-49
-
-
Brun, V.1
Dupuis, A.2
Adrait, A.3
Marcellin, M.4
Thomas, D.5
Court, M.6
Vandenesch, F.7
Garin, J.8
-
22
-
-
33847416604
-
A synthetic protein approach toward accurate mass spectrometric quantification of component stoichiometry of multiprotein complexes
-
DOI 10.1021/pr060447s
-
Kito, K.; Ota, K.; Fujita, T.; Ito, T. A synthetic protein approach toward accurate mass spectrometric quantification of component stoichiometry of multiprotein complexes J. Proteome Res. 2007, 6 (2) 792-800 (Pubitemid 46340182)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.2
, pp. 792-800
-
-
Kito, K.1
Ota, K.2
Fujita, T.3
Ito, T.4
-
23
-
-
33847179916
-
Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes
-
Pratt, J. M.; Simpson, D. M.; Doherty, M. K.; Rivers, J.; Gaskell, S. J.; Beynon, R. J. Multiplexed absolute quantification for proteomics using concatenated signature peptides encoded by QconCAT genes Nat. Protoc. 2006, 1 (2) 1029-43
-
(2006)
Nat. Protoc.
, vol.1
, Issue.2
, pp. 1029-43
-
-
Pratt, J.M.1
Simpson, D.M.2
Doherty, M.K.3
Rivers, J.4
Gaskell, S.J.5
Beynon, R.J.6
-
24
-
-
53049096977
-
Multiple reaction monitoring of mTRAQ-labeled peptides enables absolute quantification of endogenous levels of a potential cancer marker in cancerous and normal endometrial tissues
-
DeSouza, L. V.; Taylor, A. M.; Li, W.; Minkoff, M. S.; Romaschin, A. D.; Colgan, T. J.; Siu, K. W. Multiple reaction monitoring of mTRAQ-labeled peptides enables absolute quantification of endogenous levels of a potential cancer marker in cancerous and normal endometrial tissues J. Proteome Res. 2008, 7 (8) 3525-34
-
(2008)
J. Proteome Res.
, vol.7
, Issue.8
, pp. 3525-34
-
-
Desouza, L.V.1
Taylor, A.M.2
Li, W.3
Minkoff, M.S.4
Romaschin, A.D.5
Colgan, T.J.6
Siu, K.W.7
-
25
-
-
77954573328
-
Combination of improved (18)O incorporation and multiple reaction monitoring: A universal strategy for absolute quantitative verification of serum candidate biomarkers of liver cancer
-
Zhao, Y.; Jia, W.; Sun, W.; Jin, W.; Guo, L.; Wei, J.; Ying, W.; Zhang, Y.; Xie, Y.; Jiang, Y.; He, F.; Qian, X. Combination of improved (18)O incorporation and multiple reaction monitoring: a universal strategy for absolute quantitative verification of serum candidate biomarkers of liver cancer J. Proteome Res. 2010, 9 (6) 3319-27
-
(2010)
J. Proteome Res.
, vol.9
, Issue.6
, pp. 3319-27
-
-
Zhao, Y.1
Jia, W.2
Sun, W.3
Jin, W.4
Guo, L.5
Wei, J.6
Ying, W.7
Zhang, Y.8
Xie, Y.9
Jiang, Y.10
He, F.11
Qian, X.12
-
26
-
-
42649091860
-
Comparative evaluation of current peptide production platforms used in absolute quantification in proteomics
-
DOI 10.1074/mcp.M700495-MCP200
-
Mirzaei, H.; McBee, J. K.; Watts, J.; Aebersold, R. Comparative evaluation of current peptide production platforms used in absolute quantification in proteomics Mol. Cell. Proteomics 2008, 7 (4) 813-23 (Pubitemid 351597489)
-
(2008)
Molecular and Cellular Proteomics
, vol.7
, Issue.4
, pp. 813-823
-
-
Mirzaei, H.1
McBee, J.K.2
Watts, J.3
Aebersold, R.4
-
27
-
-
0001644020
-
The human plasma proteome: History, character, and diagnostic prospects
-
Anderson, N. L.; Anderson, N. G. The human plasma proteome: history, character, and diagnostic prospects Mol. Cell. Proteomics 2002, 1 (11) 845-67
-
(2002)
Mol. Cell. Proteomics
, vol.1
, Issue.11
, pp. 845-67
-
-
Anderson, N.L.1
Anderson, N.G.2
-
28
-
-
63049090914
-
How specific is my SRM?: The issue of precursor and product ion redundancy
-
Sherman, J.; McKay, M. J.; Ashman, K.; Molloy, M. P. How specific is my SRM?: The issue of precursor and product ion redundancy Proteomics 2009, 9 (5) 1120-3
-
(2009)
Proteomics
, vol.9
, Issue.5
, pp. 1120-3
-
-
Sherman, J.1
McKay, M.J.2
Ashman, K.3
Molloy, M.P.4
-
29
-
-
57749176505
-
Quantitative analysis of histone deacetylase-1 selective histone modifications by differential mass spectrometry
-
Lee, A. Y.; Paweletz, C. P.; Pollock, R. M.; Settlage, R. E.; Cruz, J. C.; Secrist, J. P.; Miller, T. A.; Stanton, M. G.; Kral, A. M.; Ozerova, N. D.; Meng, F.; Yates, N. A.; Richon, V.; Hendrickson, R. C. Quantitative analysis of histone deacetylase-1 selective histone modifications by differential mass spectrometry J. Proteome Res. 2008, 7 (12) 5177-86
-
(2008)
J. Proteome Res.
, vol.7
, Issue.12
, pp. 5177-86
-
-
Lee, A.Y.1
Paweletz, C.P.2
Pollock, R.M.3
Settlage, R.E.4
Cruz, J.C.5
Secrist, J.P.6
Miller, T.A.7
Stanton, M.G.8
Kral, A.M.9
Ozerova, N.D.10
Meng, F.11
Yates, N.A.12
Richon, V.13
Hendrickson, R.C.14
-
30
-
-
77953167152
-
Revealing novel telomere proteins using in vivo cross-linking, tandem affinity purification, and label-free quantitative LC-FTICR-MS
-
Nittis, T.; Guittat, L.; LeDuc, R. D.; Dao, B.; Duxin, J. P.; Rohrs, H.; Townsend, R. R.; Stewart, S. A. Revealing novel telomere proteins using in vivo cross-linking, tandem affinity purification, and label-free quantitative LC-FTICR-MS Mol. Cell. Proteomics 2010, 9 (6) 1144-56
-
(2010)
Mol. Cell. Proteomics
, vol.9
, Issue.6
, pp. 1144-56
-
-
Nittis, T.1
Guittat, L.2
Leduc, R.D.3
Dao, B.4
Duxin, J.P.5
Rohrs, H.6
Townsend, R.R.7
Stewart, S.A.8
-
31
-
-
77949869612
-
Application of an end-to-end biomarker discovery platform to identify target engagement markers in cerebrospinal fluid by high resolution differential mass spectrometry
-
Paweletz, C. P.; Wiener, M. C.; Bondarenko, A. Y.; Yates, N. A.; Song, Q.; Liaw, A.; Lee, A. Y.; Hunt, B. T.; Henle, E. S.; Meng, F.; Sleph, H. F.; Holahan, M.; Sankaranarayanan, S.; Simon, A. J.; Settlage, R. E.; Sachs, J. R.; Shearman, M.; Sachs, A. B.; Cook, J. J.; Hendrickson, R. C. Application of an end-to-end biomarker discovery platform to identify target engagement markers in cerebrospinal fluid by high resolution differential mass spectrometry J. Proteome Res. 2010, 9 (3) 1392-401
-
(2010)
J. Proteome Res.
, vol.9
, Issue.3
, pp. 1392-401
-
-
Paweletz, C.P.1
Wiener, M.C.2
Bondarenko, A.Y.3
Yates, N.A.4
Song, Q.5
Liaw, A.6
Lee, A.Y.7
Hunt, B.T.8
Henle, E.S.9
Meng, F.10
Sleph, H.F.11
Holahan, M.12
Sankaranarayanan, S.13
Simon, A.J.14
Settlage, R.E.15
Sachs, J.R.16
Shearman, M.17
Sachs, A.B.18
Cook, J.J.19
Hendrickson, R.C.20
more..
-
32
-
-
79955436583
-
Quantitative analysis of the intra- and inter-individual variability of the normal urinary proteome
-
Nagaraj, N.; Mann, M. Quantitative analysis of the intra- and inter-individual variability of the normal urinary proteome J. Proteome Res. 2011, 10 (2) 637-45
-
(2011)
J. Proteome Res.
, vol.10
, Issue.2
, pp. 637-45
-
-
Nagaraj, N.1
Mann, M.2
-
33
-
-
79952437118
-
Systematic discovery of ectopic pregnancy serum biomarkers using 3-D protein profiling coupled with label-free quantitation
-
Beer, L. A.; Tang, H. Y.; Sriswasdi, S.; Barnhart, K. T.; Speicher, D. W. Systematic discovery of ectopic pregnancy serum biomarkers using 3-D protein profiling coupled with label-free quantitation J. Proteome Res. 2011, 10 (3) 1126-38
-
(2011)
J. Proteome Res.
, vol.10
, Issue.3
, pp. 1126-38
-
-
Beer, L.A.1
Tang, H.Y.2
Sriswasdi, S.3
Barnhart, K.T.4
Speicher, D.W.5
-
34
-
-
35648931589
-
Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer
-
DOI 10.1021/pr070202v
-
Whiteaker, J. R.; Zhang, H.; Zhao, L.; Wang, P.; Kelly-Spratt, K. S.; Ivey, R. G.; Piening, B. D.; Feng, L. C.; Kasarda, E.; Gurley, K. E.; Eng, J. K.; Chodosh, L. A.; Kemp, C. J.; McIntosh, M. W.; Paulovich, A. G. Integrated pipeline for mass spectrometry-based discovery and confirmation of biomarkers demonstrated in a mouse model of breast cancer J. Proteome Res. 2007, 6 (10) 3962-75 (Pubitemid 350032560)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.10
, pp. 3962-3975
-
-
Whiteaker, J.R.1
Zhang, H.2
Zhao, L.3
Wang, P.4
Kelly-Spratt, K.S.5
Ivey, R.G.6
Piening, B.D.7
Feng, L.-C.8
Kasarda, E.9
Gurley, K.E.10
Eng, J.K.11
Chodosh, L.A.12
Kemp, C.J.13
McIntosh, M.W.14
Paulovich, A.G.15
-
35
-
-
77952851155
-
Targeted label-free quantitative analysis of secretory proteins from adipocytes in response to oxidative stress
-
Choi, S.; Kim, J.; Yea, K.; Suh, P. G.; Ryu, S. H. Targeted label-free quantitative analysis of secretory proteins from adipocytes in response to oxidative stress Anal. Biochem. 2010, 401 (2) 196-202
-
(2010)
Anal. Biochem.
, vol.401
, Issue.2
, pp. 196-202
-
-
Choi, S.1
Kim, J.2
Yea, K.3
Suh, P.G.4
Ryu, S.H.5
-
36
-
-
79960144245
-
In-depth analysis of a plasma or serum proteome using a 4D protein profiling method
-
Tang, H. Y.; Beer, L. A.; Speicher, D. W. In-depth analysis of a plasma or serum proteome using a 4D protein profiling method Methods Mol. Biol. 2011, 728, 47-67
-
(2011)
Methods Mol. Biol.
, vol.728
, pp. 47-67
-
-
Tang, H.Y.1
Beer, L.A.2
Speicher, D.W.3
-
37
-
-
78650066150
-
A systems biology analysis of metastatic melanoma using in-depth three-dimensional protein profiling
-
Han, M. J.; Wang, H.; Beer, L. A.; Tang, H. Y.; Herlyn, M.; Speicher, D. W. A systems biology analysis of metastatic melanoma using in-depth three-dimensional protein profiling Proteomics 2010, 10 (24) 4450-62
-
(2010)
Proteomics
, vol.10
, Issue.24
, pp. 4450-62
-
-
Han, M.J.1
Wang, H.2
Beer, L.A.3
Tang, H.Y.4
Herlyn, M.5
Speicher, D.W.6
-
38
-
-
75749130354
-
The clinical plasma proteome: A survey of clinical assays for proteins in plasma and serum
-
Anderson, N. L. The clinical plasma proteome: a survey of clinical assays for proteins in plasma and serum Clin. Chem. 2010, 56 (2) 177-85
-
(2010)
Clin. Chem.
, vol.56
, Issue.2
, pp. 177-85
-
-
Anderson, N.L.1
-
39
-
-
79952454673
-
A disintegrin and metalloprotease protein-12 as a novel marker for the diagnosis of ectopic pregnancy
-
Rausch, M. E.; Beer, L.; Sammel, M. D.; Takacs, P.; Chung, K.; Shaunik, A.; Speicher, D.; Barnhart, K. T. A disintegrin and metalloprotease protein-12 as a novel marker for the diagnosis of ectopic pregnancy Fertil. Steril. 2011, 95 (4) 1373-8
-
(2011)
Fertil. Steril.
, vol.95
, Issue.4
, pp. 1373-8
-
-
Rausch, M.E.1
Beer, L.2
Sammel, M.D.3
Takacs, P.4
Chung, K.5
Shaunik, A.6
Speicher, D.7
Barnhart, K.T.8
-
40
-
-
18844400905
-
Peroxiredoxin 6, a 1-Cys peroxiredoxin, functions in antioxidant defense and lung phospholipid metabolism
-
DOI 10.1016/j.freeradbiomed.2005.02.011, PII S0891584905000821
-
Manevich, Y.; Fisher, A. B. Peroxiredoxin 6, a 1-Cys peroxiredoxin, functions in antioxidant defense and lung phospholipid metabolism Free Radical Biol. Med. 2005, 38 (11) 1422-32 (Pubitemid 40693827)
-
(2005)
Free Radical Biology and Medicine
, vol.38
, Issue.11
, pp. 1422-1432
-
-
Manevich, Y.1
Fisher, A.B.2
-
41
-
-
76649112729
-
Peroxiredoxin 6 promotes lung cancer cell invasion by inducing urokinase-type plasminogen activator via p38 kinase, phosphoinositide 3-kinase, and Akt
-
Lee, S. B.; Ho, J. N.; Yoon, S. H.; Kang, G. Y.; Hwang, S. G.; Um, H. D. Peroxiredoxin 6 promotes lung cancer cell invasion by inducing urokinase-type plasminogen activator via p38 kinase, phosphoinositide 3-kinase, and Akt Mol. Cells 2009, 28 (6) 583-8
-
(2009)
Mol. Cells
, vol.28
, Issue.6
, pp. 583-8
-
-
Lee, S.B.1
Ho, J.N.2
Yoon, S.H.3
Kang, G.Y.4
Hwang, S.G.5
Um, H.D.6
-
42
-
-
77950828060
-
Phospholipase A2 activity of peroxiredoxin 6 promotes invasion and metastasis of lung cancer cells
-
Ho, J. N.; Lee, S. B.; Lee, S. S.; Yoon, S. H.; Kang, G. Y.; Hwang, S. G.; Um, H. D. Phospholipase A2 activity of peroxiredoxin 6 promotes invasion and metastasis of lung cancer cells Mol. Cancer Ther. 2010, 9 (4) 825-32
-
(2010)
Mol. Cancer Ther.
, vol.9
, Issue.4
, pp. 825-32
-
-
Ho, J.N.1
Lee, S.B.2
Lee, S.S.3
Yoon, S.H.4
Kang, G.Y.5
Hwang, S.G.6
Um, H.D.7
-
43
-
-
50649106648
-
Cathepsin D - Many functions of one aspartic protease
-
Benes, P.; Vetvicka, V.; Fusek, M. Cathepsin D - many functions of one aspartic protease Crit. Rev. Oncol. Hematol. 2008, 68 (1) 12-28
-
(2008)
Crit. Rev. Oncol. Hematol.
, vol.68
, Issue.1
, pp. 12-28
-
-
Benes, P.1
Vetvicka, V.2
Fusek, M.3
-
44
-
-
0020578295
-
Molecular forms of β-hexosaminidase and cathepsin D in serum and urine of healthy subjects and patients with elevated activity of lysosomal enzymes
-
Zuhlsdorf, M.; Imort, M.; Hasilik, A.; von Figura, K. Molecular forms of beta-hexosaminidase and cathepsin D in serum and urine of healthy subjects and patients with elevated activity of lysosomal enzymes Biochem. J. 1983, 213 (3) 733-40 (Pubitemid 13044143)
-
(1983)
Biochemical Journal
, vol.213
, Issue.3
, pp. 733-740
-
-
Zuhlsdorf, M.1
Imort, M.2
Hasilik, A.3
Von Figura, K.4
-
45
-
-
2942711855
-
Cathepsin D expression levels in nongynecological solid tumors: Clinical and therapeutic implications
-
DOI 10.1023/B:CLIN.0000024740.44602.b7
-
Leto, G.; Tumminello, F. M.; Crescimanno, M.; Flandina, C.; Gebbia, N. Cathepsin D expression levels in nongynecological solid tumors: clinical and therapeutic implications Clin. Exp. Metastasis 2004, 21 (2) 91-106 (Pubitemid 38988083)
-
(2004)
Clinical and Experimental Metastasis
, vol.21
, Issue.2
, pp. 91-106
-
-
Leto, G.1
Tumminello, F.M.2
Crescimanno, M.3
Flandina, C.4
Gebbia, N.5
-
46
-
-
0030978333
-
Increased cathepsin D level in the serum of patients with metastatic breast carcinoma detected with a specific pro-cathepsin D immunoassay
-
DOI 10.1002/(SICI)10 97-0142(199706 01)79:11<2132::AID-CN CR10>3.0.CO;2-X
-
Brouillet, J. P.; Dufour, F.; Lemamy, G.; Garcia, M.; Schlup, N.; Grenier, J.; Mani, J. C.; Rochefort, H. Increased cathepsin D level in the serum of patients with metastatic breast carcinoma detected with a specific pro-cathepsin D immunoassay Cancer 1997, 79 (11) 2132-6 (Pubitemid 27227377)
-
(1997)
Cancer
, vol.79
, Issue.11
, pp. 2132-2136
-
-
Brouillet, J.-P.1
Dufour, F.2
Lemamy, G.3
Garcia, M.4
Schlup, N.5
Grenier, J.6
Mani, J.-C.7
Rochefort, H.8
-
47
-
-
33846133955
-
Computational prediction of proteotypic peptides for quantitative proteomics
-
DOI 10.1038/nbt1275, PII NBT1275
-
Mallick, P.; Schirle, M.; Chen, S. S.; Flory, M. R.; Lee, H.; Martin, D.; Ranish, J.; Raught, B.; Schmitt, R.; Werner, T.; Kuster, B.; Aebersold, R. Computational prediction of proteotypic peptides for quantitative proteomics Nat. Biotechnol. 2007, 25 (1) 125-31 (Pubitemid 46098780)
-
(2007)
Nature Biotechnology
, vol.25
, Issue.1
, pp. 125-131
-
-
Mallick, P.1
Schirle, M.2
Chen, S.S.3
Flory, M.R.4
Lee, H.5
Martin, D.6
Ranish, J.7
Raught, B.8
Schmitt, R.9
Werner, T.10
Kuster, B.11
Aebersold, R.12
-
48
-
-
34447329564
-
Cathepsin D serum levels are not a valid serum marker in renal cell carcinoma
-
DOI 10.1159/000102912
-
Merseburger, A. S.; Hennenlotter, J.; Stenzl, A.; Beger, G.; Rinnab, L.; Kuczyk, M. A.; Kuefer, R. Cathepsin D serum levels are not a valid serum marker in renal cell carcinoma Urol. Int. 2007, 79 (1) 41-3 (Pubitemid 47051817)
-
(2007)
Urologia Internationalis
, vol.79
, Issue.1
, pp. 41-43
-
-
Merseburger, A.S.1
Hennenlotter, J.2
Stenzl, A.3
Beger, G.4
Rinnab, L.5
Kuczyk, M.A.6
Kuefer, R.7
-
49
-
-
20444499432
-
Cathepsin D is a potential serum marker for poor prognosis in glioma patients
-
DOI 10.1158/0008-5472.CAN-04-4134
-
Fukuda, M. E.; Iwadate, Y.; Machida, T.; Hiwasa, T.; Nimura, Y.; Nagai, Y.; Takiguchi, M.; Tanzawa, H.; Yamaura, A.; Seki, N. Cathepsin D is a potential serum marker for poor prognosis in glioma patients Cancer Res. 2005, 65 (12) 5190-4 (Pubitemid 40827328)
-
(2005)
Cancer Research
, vol.65
, Issue.12
, pp. 5190-5194
-
-
Fukuda, M.E.1
Iwadate, Y.2
Machida, T.3
Hiwasa, T.4
Nimura, Y.5
Nagai, Y.6
Takiguchi, M.7
Tanzawa, H.8
Yamaura, A.9
Seki, N.10
|