Adaptive genetic differentiation in a predominantly self-pollinating species analyzed by transplanting into natural environment, crossbreeding and Q ST-F ST test

New Phytologist

Volumn 192, Issue 1, 2011, Pages 237-248

  Volis, S ^a  

^a BEN GURION UNIVERSITY OF THE NEGEV   (Israel)

Author keywords

Crossbreeding; Home advantage test; Local adaptation; Outbreeding depression; Population differentiation; Q ST F ST comparison

Indexed keywords

ISOENZYME;

ALLOZYME; AUTOGAMY; DESERT; DOMINANCE; GENETIC DIFFERENTIATION; GENETIC DRIFT; GRASS; HYBRID; LOCAL ADAPTATION; NATURAL SELECTION; OUTCROSSING; PHENOTYPE; POLLEN; SEED; TRANSPLANTATION;

ADAPTATION; ANALYSIS OF VARIANCE; ARTICLE; BIOLOGICAL MODEL; BIOMASS; CROSS BREEDING; ENVIRONMENT; GENETIC MARKER; GENETIC VARIABILITY; GENETICS; HORDEUM; HYBRIDIZATION; POLLEN; POLLINATION; QUANTITATIVE TRAIT; QUANTITATIVE TRAIT LOCUS; RANDOM AMPLIFIED POLYMORPHIC DNA; SPECIES DIFFERENCE;

ADAPTATION, PHYSIOLOGICAL; ANALYSIS OF VARIANCE; BIOMASS; CROSSES, GENETIC; ENVIRONMENT; GENETIC MARKERS; GENETIC VARIATION; HORDEUM; HYBRIDIZATION, GENETIC; ISOENZYMES; MODELS, GENETIC; POLLEN; POLLINATION; QUANTITATIVE TRAIT LOCI; QUANTITATIVE TRAIT, HERITABLE; RANDOM AMPLIFIED POLYMORPHIC DNA TECHNIQUE; SPECIES SPECIFICITY;

HORDEUM; HORDEUM VULGARE SUBSP. SPONTANEUM;

EID: 80052346990     PISSN: 0028646X     EISSN: 14698137     Source Type: Journal    
DOI: 10.1111/j.1469-8137.2011.03799.x     Document Type: Article

References (91)

1. Agren J, Schemske DW. 1993. Outcrossing rate and inbreeding depression in two annual monoecious herbs, Begonia hirsute and B.semiovata. Evolution 47: 125-135.
2. Alleaume-Benharira M, Pen IR, Ronce O. 2006. Geographical patterns of adaptation within a species' range: interactions between drift and gene flow. Journal of Evolutionary Biology 19: 203-215.
3. Aronson J, Kigel J, Shmida A, Klein J. 1992. Adaptive phenology of desert and Mediterranean populations of annual plants grown with and without water stress. Oecologia 89: 17-26.
4. Bennington CC, McGraw JB. 1995. Natural selection and ecotypic differentiation in Impatiens pallida. Ecological Monographs 65: 303-323.
5. Bennington CC, McGraw JB. 1996. Environment-dependence of quantitative genetic parameters in Impatiens pallida. Evolution 50: 1083-1097.
6. Boulding EG, Hay T. 2001. Genetic and demographic parameters determining population persistence after a discrete change in the environment. Heredity 86: 313-324.
7. Bradshaw AD. 1984. Ecological significance of genetic variation between populations. Dirzo R, Sarukhan J, eds. Perspectives on plant population ecology. Sunderland, MA, USA: Sinauer, 213-228.
8. Brown AHD. 1979. Enzyme polymorphism in plant populations. Theoretical Population Biology 15: 1-42.
9. Brown AHD, Zohary D, Nevo E. 1978. Outcrossing rates and heterozygosity in natural populations of Hordeum spontaneum Koch in Israel. Heredity 41: 49-62.
10. Byars SG, Papst W, Hoffmann AA. 2007. Local adaptation and cogradient selection in the alpine plant, Poa hiemata, along a narrow altitudinal gradient. Evolution 61: 2925-2941.
11. Cavalli-Sforza L. 1966. Population structure and human evolution. Proceedings of the Royal Society of London, Series B 164: 362-379.
12. Charlesworth D. 2003. Effects of inbreeding on the genetic diversity of populations. Philosophical Transactions of the Royal Society of London Series B-Biological Sciences 358: 1051-1070.
13. Clausen J, Keck DD, Hiesey WM. 1940. Experimental studies on the nature of species. I. Effect of varied environments on western North American plants. Carnegie Institute of Washington Publication No. 520.
14. Conover DO, Schultz ET. 1995. Phenotypic similarity and the evolutionary significance of countergradient variation. Trends in Ecology and Evolution 10: 248-252.
15. Endler JA. 1977. Geographic variation, speciation, and clines. Princeton, NJ, USA: Princeton Univesity Press.
16. Erickson DL, Fenster CB. 2006. Intraspecific hybridization and the recovery of fitness in the native legume Chamaecrista fasciculata. Evolution 60: 225-233.
17. Excoffier L, Smouse PE, Quattro JM. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes - application to human mitochondrial DNA restriction data. Genetics 131: 479-491.
18. Facon B, Hufbauer RA, Tayeh A, Loiseau A, Lombaert E, Vitalis R, Guillemaud T, Lundgren JG, Estoup A. 2011. Inbreeding depression is purged in the invasive insect Harmonia axyridis. Current Biology 21: 424-427.
19. Fenster CB, Galloway LF. 2000. Population differentiation in an annual legume: genetic architecture. Evolution 54: 1157-1172.
20. Franke DM, Ellis AG, Dharjwa M, Freshwater M, Fujikawa M, Padron A, Weis AE. 2006. A steep cline in flowering time for Brassica rapa in southern California: population-level variation in the field and the greenhouse. International Journal of Plant Sciences 167: 83-92.
21. Galloway LF, Fenster CB. 2000. Population differentiation in an annual legume: local adaptation. Evolution 54: 1173-1181.
22. Garant D, Forde SE, Hendry AP. 2007. The multifarious effects of dispersal and gene flow on contemporary adaptation. Functional Ecology 21: 434-443.
23. Golding GB, Strobeck C. 1979. Linkage disequilibrium in a finite population that is partially selfing. Genetics 94: 777-789.
24. Gomez-Mestre I, Tejedo M. 2004. Contrasting patterns of quantitative and neutral genetic variation in locally adapted populations of the natterjack toad, Bufo calamita. Evolution 58: 2343-2352.
25. ST, an estimator of population differentiation for quantitative traits. Genetics 172: 1337-1347.
26. Harlan RJ, Zohary D. 1966. Distribution of wild wheats and barley. Science 153: 1074-1080.
27. Hastings A. 1989. Linkage disequilibrium and genetic variances under mutation - selection balance. Genetics 121: 857-860.
28. Hedrick PW. 2006. Genetic polymorphism in heterogeneous environments: the age of genomics. Annual Review in Ecology and Systematics 37: 67-93.
29. Heiser DA, Shaw RG. 2006. The fitness effects of outcrossing in Calylophus serrulatus, a permanent translocation heterozygote. Evolution 60: 64-76.
30. Hoffmann AA, Merila J. 1999. Heritable variation and evolution under favorable and unfavorable conditions. Trends in Ecology and Evolution 14: 96-102.
31. Holt RD, Gomulkiewicz R. 1997. How does immigration influence local adaptation? A reexamination of a familiar paradigm. American Naturalist 149: 563-572.
32. Hufford KM, Mazer SJ. 2003. Plant ecotypes: genetic differentiation in the age of ecological restoration. Trends in Ecology & Evolution 18: 147-155.
33. Jenkins NL, Sgro CM, Hoffmann AA. 1997. Environmental stress and the expression of genetic variation. Btjlsma R, Loeschcke V, eds. Environmental stress, adaptation and evolution. Basel, Switzerland: Birkhauser Verlag, 79-96.
34. Johansen-Morris AD, Latta RG. 2006. Fitness consequences of hybridization between ecotypes of Avena barbata: hybrid breakdown, hybrid vigor, and transgressive segregation. Evolution 60: 1585-1595.
35. st and its relatives do not measure differentiation. Molecular Ecology 17: 4015-4026.
36. Kawecki TJ, Ebert D. 2004. Conceptual issues in local adaptation. Ecology Letters 7: 1225-1241.
37. Kirkpatrick M, Barton NH. 1997. Evolution of a species' range. American Naturalist 150: 1-23.
38. Latta RG. 1998. Differentiation of allelic frequencies at quantitative trait loci affecting locally adaptive traits. American Naturalist 151: 283-292.
39. Lavergne S, Molofsky J. 2007. Increased genetic variation and evolutionary potential drive the success of an invasive grass. Proceedings of the National Academy of Sciences, USA 104: 3883-3888.
40. Leinonen T, Cano JM, Makinen H, Merila J. 2006. Contrasting patterns of body shape and neutral genetic divergence in marine and lake populations of threespine sticklebacks. Journal of Evolutionary Biology 19: 1803-1812.
41. Leinonen T, O'Hara RB, Cano JM, Merila J. 2008. Comparative studies of quantitative trait and neutral marker divergence: a meta-analysis. Journal of Evolutionary Biology 21: 1-17.
42. Lenormand T. 2002. Gene flow and the limits to natural selection. Trends in Ecology & Evolution 117: 183-189.
43. Liancourt P, Tielborger K. 2009. Competition and a short growing season lead to ecotypic differentiation at the two extremes of the ecological range. Functional Ecology 23: 397-404.
44. Linhart YB, Grant MC. 1996. Evolutionary significance of local genetic differentiation in plants. Annual Review of Ecology and Systematics 27: 237-277.
45. Lopez-Fanjul C, Fernandez A, Toro MA. 2003. The effect of neutral nonadditive gene action on the quantitative index of population divergence. Genetics 164: 1627-1633.
46. Lynch JM. 1991. The genetic interpretation of inbreeding depression and outbreeding depression. Evolution 45: 622-629.
47. Lynch M, Pfrender M, Spitze K, Lehman N, Hicks J, Allen D, Latta L, Ottene M, Bogue F, Colbourne J. 1999. The quantitative and molecular genetic architecture of a subdivided species. Evolution 53: 100-110.
48. Lynch M, Walsh B. 1998. Genetics and analysis of quantitative traits. Sunderland, MA, USA: Sinauer Associates.
49. McKay JK, Latta RG. 2002. Adaptive population divergence: markers, QTL and traits. Trends in Ecology & Evolution 17: 285-291.
50. Merilä J, Björklund M, Baker AJ. 1997. Historical demography and present day population structure of the greenfinch, Carduelis chloris- an analysis of mtdna control-region sequences. Journal of Evolutionary Biology 51: 946-956.
51. Merilä J, Crnokrak P. 2001. Comparison of genetic differentiation at marker loci and quantitative traits. Journal of Evolutionary Biology 14: 892-903.
52. ST under neutrality. Genetics 180: 1023-1037.
53. Mitchell-Olds T, Rutledge JJ. 1986. Quantitative genetics in natural plant populations: a review of the theory. American Naturalist 127: 379-402.
54. Montalvo AM, Ellstrand NC. 2001. Nonlocal transplantation and outbreeding depression in the subshrub Lotus scoparius (Fabaceae). American Journal of Botany 88: 258-269.
55. Morrell PL, Lundy KE, Clegg MT. 2003. Distinct geographic patterns of genetic diversity are maintained in wild barley (Hordeum vulgare ssp. spontaneum) despite migration. Proceedings of the National Academy of Sciences 100: 10812-10817.
56. Palo JU, O'Hara RB, Laugen AT, Laurila A, Primmer CR, Merila J. 2003. Latitudinal divergence of common frog (Rana temporaria) life history traits by natural selection: evidence from a comparison of molecular and quantitative genetic data. Molecular Ecology 12: 1963-1978.
57. Pérez de la Vega M, García P, Allard RW. 1991. Multilocus genetic structure of ancestral Spanish and colonial Californian populations of Avena barbata. Proceedings of the National Academy of Sciences, USA 88: 1202-1206.
58. Petru M, Tielborger K. 2008. Germination behaviour of annual plants under changing climatic conditions: separating local and regional environmental effects. Oecologia 155: 717-728.
59. Porcher E, Giraud T, Goldringer I, Lavigne C. 2004. Experimental demonstration of a causal relationship between heterogeneity of selection and genetic differentiation in quantitative traits. Evolution 58: 1434-1445.
60. Porcher E, Giraud T, Lavigne C. 2006. Genetic differentiation of neutral markers and quantitative traits in predominantly selfing metapopulations: confronting theory and experiments with Arabidopsis thaliana. Genetical Research 87: 1-12.
61. Prout T, Barker JSF. 1989. Ecological aspects of the heritability of body size in Drosophila buzzatii. Genetics 123: 803-813.
62. Prout T, Barker JSF. 1993. F Statistics in Drosophila buzzatii: selection, population size and inbreeding. Genetics 134: 369-375.
63. Pujol B, Pannell JR. 2008. Reduced responses to selection after species range expansion. Science 321: 96.
64. ST comparisons for natural populations meaningful? Molecular Ecology 17: 4782-4785.
65. Pujol B, Zhou SR, Sanchez Vilas J, Pannell JR. 2009. Reduced inbreeding depression after species range expansion. Proceedings of the National Academy of Sciences, USA 106: 15379-15383.
66. Rasanen K, Hendry AP. 2008. Disentangling interactions between adaptive divergence and gene flow when ecology drives diversification. Ecology Letters 11: 624-636.
67. van Rijn CPE, Heersche I, van Berkel YEM, Nevo E, Lambers H, Poorter H. 2000. Growth characteristics in Hordeum spontaneum populations from different habitats. New Phytologist 146: 471-481.
68. Rousselle Y, Thomas M, Galic N, Bonnin I, Goldringer I. 2010. Inbreeding depression and low between-population heterosis in recently diverged experimental populations of a selfing species. Heredity 106: 289-299.
69. Saint-Laurent R, Legault M, Bernatchez L. 2003. Divergent selection maintains adaptive differentiation despite high gene flow between sympatric rainbow smelt ecotypes (Osmerus mordax Mitchill). Molecular Ecology 12: 315-330.
70. Santamaria L, Figuerola J, Pilon JJ, Mjelde M, Green AJ, de Boer T, King RA, Gornall RJ. 2003. Plant performance across latitude: the role of plasticity and local adaptation in an aquatic plant. Ecology 84: 2454-2461.
71. Snow L, Brody T. 1984. Genetic variation of Hordeum spontaneum in Israel: eco-geographical races, detected by trait measurements. Plant Systematics and Evolution 145: 15-28.
72. Spitze K. 1993. Population structure in Daphnia obtusa: quantitative genetic and allozymic variation. Genetics 135: 367-374.
73. StatSoft Inc. 2004. STATISTICA (data analysis software system), version 7 [WWW document]. URL.
74. Storz JF. 2002. Contrasting patterns of divergence in quantitative traits and neutral DNA markers: analysis of clinal variation. Molecular Ecology 11: 2537-2551.
75. Turesson G. 1922. The genotypical response of the plant species to the habitat. Hereditas 3: 211-350.
76. Volis S. 2008. Detection of signatures of positive selection in naturally occurring genetic variation. Koven VT, ed. Population genetics research progress. Hauppauge, NY, USA: Nova Science Publishers, 279-310.
77. Volis S, Mendlinger S, Turuspekov Y, Esnazarov U. 2002a. Phenotypic and allozyme variation in Mediterranean and desert populations of wild barley, Hordeum spontaneum Koch. Evolution 56: 1403-1415.
78. Volis S, Mendlinger S, Ward D. 2002b. Adaptive traits of wild barley plants of Mediterranean and desert origin. Oecologia 133: 131-138.
79. Volis S, Mendlinger S, Ward D. 2004. Demography and role of the seed bank in Mediterranean and desert populations of wild barley, Hordeum spontaneum Koch. Basic and Applied Ecology 5: 53-64.
80. Volis S, Shulgina I, Ward D, Mendlinger S. 2003. Regional allozyme variation in wild barley, Hordeum spontaneum: adaptive or neutral? Journal of Heredity 94: 341-351.
81. Volis S, Shulgina I, Zaretsky M, Koren O. 2011. Epistasis in natural populations of a predominantly selfing plant. Heredity 106: 300-309.
82. ST at two spatial scales. Heredity 95: 466-475.
83. Volis S, Yakubov B, Shulgina I, Ward D, Zur V, Mendlinger S. 2001. Tests for adaptive RAPD variation in population genetic structure of wild barley, Hordeum spontaneum Koch. Biological Journal of the Linnean Society 74: 289-303.
84. Volis S, Zaretsky M, Shulgina I. 2010. Fine-scale spatial genetic structure in a predominantly selfing plant: role of seed and pollen dispersal. Heredity 105: 384-393.
85. Volis S, Zhang Y. 2010. Separating effects of gene flow and natural selection along an environmental gradient. Evolutionary Biology 37: 187-199.
86. Waser NM, Price MV. 1994. Crossing-distance effects in Delphinium nelsonii- outbreeding and inbreeding depression in progeny fitness. Evolution 48: 842-852.
87. Weider LJ, Hebert PDN. 1987. Ecological and physiological differentiation among low-arctic clones of Daphnia pulex. Ecology 68: 188-198.
88. Whitlock MC. 1999. Neutral additive genetic variance in a metapopulation. Genetical Research 74: 215-221.
89. ST. Molecular Ecology 17: 1885-1896.
90. ST. Genetics 183: 1055-1063.
91. 2 hybrids to detect the potential role of selection in ecotypic differentiation. New Phytologist 173: 354-366.