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Volumn 35, Issue 7-8, 2011, Pages 542-556

Real-time deformable registration of multi-modal whole slides for digital pathology

Author keywords

B spline; Deformable registration; Digital pathology; Immunohistochemistry; Mutual information; Whole slide imaging

Indexed keywords

B-SPLINE; DEFORMABLE REGISTRATION; DIGITAL PATHOLOGY; IMMUNOHISTOCHEMISTRY; MUTUAL INFORMATIONS; WHOLE SLIDE IMAGING;

EID: 80052339795     PISSN: 08956111     EISSN: 18790771     Source Type: Journal    
DOI: 10.1016/j.compmedimag.2011.06.006     Document Type: Article
Times cited : (29)

References (33)
  • 3
    • 70349459406 scopus 로고    scopus 로고
    • Feature-based registration of histopathology images with different stains: an application for computerized follicular lymphoma prognosis
    • Cooper L., Sertel O., Kong J., Lozanski G., Huang K., Gurcan M. Feature-based registration of histopathology images with different stains: an application for computerized follicular lymphoma prognosis. Computer Methods and Programs in Biomedicine 2009, 96(3):182-192.
    • (2009) Computer Methods and Programs in Biomedicine , vol.96 , Issue.3 , pp. 182-192
    • Cooper, L.1    Sertel, O.2    Kong, J.3    Lozanski, G.4    Huang, K.5    Gurcan, M.6
  • 4
    • 27144454877 scopus 로고    scopus 로고
    • Efficient multi-modal dense field non-rigid registration: alignment of histological and section images
    • du Bois d'Aische A., Craene M.D., Geets X., Gregoire V., Macq B., Warfield S. Efficient multi-modal dense field non-rigid registration: alignment of histological and section images. Medical Image Analysis 2005, 9(6):538-546.
    • (2005) Medical Image Analysis , vol.9 , Issue.6 , pp. 538-546
    • du Bois d'Aische, A.1    Craene, M.D.2    Geets, X.3    Gregoire, V.4    Macq, B.5    Warfield, S.6
  • 5
    • 30344459450 scopus 로고    scopus 로고
    • Virtual microscopy in prostate histopathology: simultaneous viewing of biopsies stained sequentially with hematoxylin and eosin, and α-methylacyl-coenzyme a racemase/p63 immunohistochemistry
    • Helin H., Lundin M., Laakso M., Lundin J., Helin H., Isola J. Virtual microscopy in prostate histopathology: simultaneous viewing of biopsies stained sequentially with hematoxylin and eosin, and α-methylacyl-coenzyme a racemase/p63 immunohistochemistry. The Journal of Urology 2006, 175(2):495-499.
    • (2006) The Journal of Urology , vol.175 , Issue.2 , pp. 495-499
    • Helin, H.1    Lundin, M.2    Laakso, M.3    Lundin, J.4    Helin, H.5    Isola, J.6
  • 7
    • 77950593897 scopus 로고    scopus 로고
    • Creation of a fully digital pathology slide archive by high-volume tissue slide scanning
    • Huisman A., Looijen A., van den Brink S., van Diest P.J. Creation of a fully digital pathology slide archive by high-volume tissue slide scanning. Human Pathology 2010, 41(5):751-757.
    • (2010) Human Pathology , vol.41 , Issue.5 , pp. 751-757
    • Huisman, A.1    Looijen, A.2    van den Brink, S.3    van Diest, P.J.4
  • 9
    • 3543006336 scopus 로고    scopus 로고
    • The ITK software guide: the insight segmentation and registration toolkit
    • Tech. rep. Kitware, Inc.
    • Ibánez L, Schroeder W, Ng L, Cates J. The ITK software guide: the insight segmentation and registration toolkit. Tech. rep. Kitware, Inc.; 2007.
    • (2007)
    • Ibánez, L.1    Schroeder, W.2    Ng, L.3    Cates, J.4
  • 11
    • 80052304587 scopus 로고    scopus 로고
    • Elastix manual, v4.3, Tech. rep. Utrecht: Image Sciences Institute, University Medical Center;
    • Klein S, Staring M, Elastix manual, v4.3, Tech. rep. Utrecht: Image Sciences Institute, University Medical Center; 2010.
    • (2010)
    • Klein, S.1    Staring, M.2
  • 13
    • 36348985858 scopus 로고    scopus 로고
    • Evaluation of optimization methods for nonrigid medical image registration using mutual information and b-splines
    • Klein S., Staring M., Pluim J. Evaluation of optimization methods for nonrigid medical image registration using mutual information and b-splines. IEEE Transactions on Image Processing 2007, 16(12):2879-2890.
    • (2007) IEEE Transactions on Image Processing , vol.16 , Issue.12 , pp. 2879-2890
    • Klein, S.1    Staring, M.2    Pluim, J.3
  • 14
    • 24644454361 scopus 로고    scopus 로고
    • Three dimensional reconstruction of a human breast carcinoma using routine laboratory equipment and immunohistochemistry
    • Kurien T., Boyce R., Paish E., Ronan J., Maddison J., Rakha E., et al. Three dimensional reconstruction of a human breast carcinoma using routine laboratory equipment and immunohistochemistry. Journal of Clinical Pathology 2004, 58(9):968-972.
    • (2004) Journal of Clinical Pathology , vol.58 , Issue.9 , pp. 968-972
    • Kurien, T.1    Boyce, R.2    Paish, E.3    Ronan, J.4    Maddison, J.5    Rakha, E.6
  • 15
    • 44049088862 scopus 로고    scopus 로고
    • Automatic registration of serial sections of mouse lymph node by using Image-Reg
    • Ma B., Lin Z., Winkelbach S., Lindenmaier W., Dittmar K. Automatic registration of serial sections of mouse lymph node by using Image-Reg. Micron 2008, 39(4):387-396.
    • (2008) Micron , vol.39 , Issue.4 , pp. 387-396
    • Ma, B.1    Lin, Z.2    Winkelbach, S.3    Lindenmaier, W.4    Dittmar, K.5
  • 17
    • 0032008619 scopus 로고    scopus 로고
    • A survey of medical image registration
    • Maintz J., Viergever M. A survey of medical image registration. Medical Image Analysis 1998, 2(1):1-36.
    • (1998) Medical Image Analysis , vol.2 , Issue.1 , pp. 1-36
    • Maintz, J.1    Viergever, M.2
  • 22
    • 0018306059 scopus 로고
    • A threshold selection method from gray-level histograms
    • Otsu N. A threshold selection method from gray-level histograms. IEEE Transactions on Systems, Man, and Cybernetics 1979, 9(1):62-66.
    • (1979) IEEE Transactions on Systems, Man, and Cybernetics , vol.9 , Issue.1 , pp. 62-66
    • Otsu, N.1
  • 23
    • 80052311373 scopus 로고    scopus 로고
    • DICOM Standards Committee Working Group 26 (Pathology). whole slide microscopic image IOD and SOP classes. Tech. rep. NEMA;
    • DICOM Standards Committee Working Group 26 (Pathology). Supplement 145: whole slide microscopic image IOD and SOP classes. Tech. rep. NEMA; 2010.
    • (2010) , Issue.SUPPL. 145
  • 24
    • 33645845387 scopus 로고    scopus 로고
    • Piecewise affine registration of biological images for volume reconstruction
    • Pitiot A., Bardinet E., Thompson P., Malandain G. Piecewise affine registration of biological images for volume reconstruction. Medical Image Analysis 2006, 10(3):465-483.
    • (2006) Medical Image Analysis , vol.10 , Issue.3 , pp. 465-483
    • Pitiot, A.1    Bardinet, E.2    Thompson, P.3    Malandain, G.4
  • 25
  • 28
    • 62349090240 scopus 로고    scopus 로고
    • Non-rigid registration for large sets of microscopic images on graphics processors
    • Ruiz A., Ujaldon M., Cooper L., Huang K. Non-rigid registration for large sets of microscopic images on graphics processors. Journal of Signal Processing Systems 2009, 55(1):229-250.
    • (2009) Journal of Signal Processing Systems , vol.55 , Issue.1 , pp. 229-250
    • Ruiz, A.1    Ujaldon, M.2    Cooper, L.3    Huang, K.4
  • 29
    • 35648999988 scopus 로고    scopus 로고
    • A rigidity penalty term for nonrigid registration
    • Staring M., Klein S., Pluim J. A rigidity penalty term for nonrigid registration. Medical Physics 2007, 34(11):4098-4108.
    • (2007) Medical Physics , vol.34 , Issue.11 , pp. 4098-4108
    • Staring, M.1    Klein, S.2    Pluim, J.3
  • 30
    • 0032153006 scopus 로고    scopus 로고
    • Image matching as a diffusion process: an analogy with Maxwell's demons
    • Thirion J. Image matching as a diffusion process: an analogy with Maxwell's demons. Medical Image Analysis 1998, 2(3):243-260.
    • (1998) Medical Image Analysis , vol.2 , Issue.3 , pp. 243-260
    • Thirion, J.1
  • 31
    • 79954434748 scopus 로고    scopus 로고
    • Introducing Dice, Jaccard, and other label overlap measures to ITK
    • Tustison N., Gee J. Introducing Dice, Jaccard, and other label overlap measures to ITK. Insight Journal 2009.
    • (2009) Insight Journal
    • Tustison, N.1    Gee, J.2
  • 33
    • 0043237770 scopus 로고    scopus 로고
    • Image registration methods: a survey
    • Zitová B., Flusser J. Image registration methods: a survey. Image and Vision Computing 2003, 21(11):977-1000.
    • (2003) Image and Vision Computing , vol.21 , Issue.11 , pp. 977-1000
    • Zitová, B.1    Flusser, J.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.