Complete genome sequence of Amycolicicoccus subflavus DQS3-9A1 T, an actinomycete isolated from crude oil-polluted soil

Journal of Bacteriology

Volumn 193, Issue 17, 2011, Pages 4538-4539

  Cai, Man ^a,b   Chen, Wei Min ^b   Nie, Yong ^b   Chi, Chang Qiao ^b   Wang, Ya Nan ^b   Tang, Yue Qin ^b   Li, Guo Ying ^a   Wu, Xiao Lei ^b  

^a SICHUAN UNIVERSITY   (China)

^b PEKING UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

PETROLEUM;

ACTINOBACTERIA; AMYCOLICICOCCUS SUBFLAVUS; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM ISOLATE; CHINA; GENE SEQUENCE; GENETIC ASSOCIATION; GENUS; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SOIL POLLUTION;

ALCOHOL DEHYDROGENASE; ALDEHYDE DEHYDROGENASE; BIODEGRADATION, ENVIRONMENTAL; CHROMOSOMES, BACTERIAL; GENOME, BACTERIAL; HYDROCARBONS; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; MYCOBACTERIACEAE; OPEN READING FRAMES; PLASMIDS; SOIL MICROBIOLOGY; SOIL POLLUTANTS;

EID: 80052339088     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05388-11     Document Type: Note

References (12)

1. Amouric, A., et al. 2009. Identification of different alkane hydroxylase systems in Rhodococcus ruber strain SP2B, an hexane-degrading actinomycete. J. Appl. Microbiol. 108:1903-1916.
2. Bentley, D. R., et al. 2008. Accurate whole human genome sequencing using reversible terminator chemistry. Nature 456:53-59.
3. Cai, M., et al. 27 August 2010. Salinarimonas ramus sp. nov. and Tessaracoccus oleiagri sp. nov., isolated from a crude oil contaminated saline soil. Int. J. Syst. Evol. Microbiol. [Epub ahead of print.] doi:10.1099/ijs.0.025932-0.
4. Feng, L., et al. 2008. A recalibrated molecular clock and independent origins for the cholera pandemic clones. PLoS One 3:e4053.
5. Gu, J., et al. 2007. Marinobacter gudaonensis sp. nov., isolated from an oil-polluted saline soil in a Chinese oilfield. Int. J. Syst. Evol. Microbiol. 57:250-254.
6. Li, H., and R. Durbin. 2010. Fast and accurate long-read alignment with Burrows-Wheeler transform. Bioinformatics 26:589-595.
7. Margulies, M., et al. 2005. Genome sequencing in microfabricated highdensity picolitre reactors. Nature 437:376-380.
8. McLeod, M. P., et al. 2006. The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse. Proc. Natl. Acad. Sci. U. S. A. 103:15582-15587.
9. Wang, Y. N., et al. 2007. Halomonas shengliensis sp. nov., a moderately halophilic, denitrifying, crude-oil-utilizing bacterium. Int. J. Syst. Evol. Microbiol. 57:1222-1226.
10. Wang, Y. N., et al. 2007. Halomonas gudaonensis sp. nov., isolated from a saline soil contaminated by crude oil. Int. J. Syst. Evol. Microbiol. 57:911-915.
11. Whyte, L. G., et al. 2002. Gene cloning and characterization of multiple alkane hydroxylase systems in Rhodococcus strains Q15 and NRRL B-16531. Appl. Environ. Microbiol. 68:5933-5942.
12. Wu, X. L., et al. 2009. Filomicrobium insigne sp. nov., isolated from an oil-polluted saline soil. Int. J. Syst. Evol. Microbiol. 59:300-305.