Genetic engineering of group 2 σ factor SigE widely activates expressions of sugar catabolic genes in Synechocystis species PCC 6803

Journal of Biological Chemistry

Volumn 286, Issue 35, 2011, Pages 30962-30971

  Osanai, Takashi ^a,b,c   Oikawa, Akira ^b   Azuma, Miyuki ^a   Tanaka, Kan ^a,d   Saito, Kazuki ^b,d   Hirai, Masami Yokota ^b   Ikeuchi, Masahiko ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b RIKEN Center for Sustainable Resource Science   (Japan)

^c JAPAN SCIENCE AND TECHNOLOGY AGENCY   (Japan)

^d CHIBA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ACETYL-COA; CARBON METABOLISM; CATABOLIC ENZYMES; CATABOLIC GENES; CELLULAR DYNAMICS; CYANOBACTERIUM; DARK CONDITIONS; ENGINEERING METHODS; GLUCOSE-6-PHOSPHATE DEHYDROGENASE; GLYCOGEN CATABOLISM; GLYCOGEN PHOSPHORYLASE; IMMUNOBLOTTING; ISOAMYLASE; LIGHT ENERGY; METABOLIC ENGINEERING; METABOLITE LEVEL; METABOLOME ANALYSIS; MIXOTROPHIC; OVER-EXPRESSION; OXIDATIVE PENTOSE PHOSPHATE PATHWAYS; PHOTOSYNTHETIC BACTERIAS; PHOTOSYNTHETIC ORGANISMS; PROTEIN LEVEL; SYNECHOCYSTIS; SYNECHOCYSTIS SP. PCC 6803; TCA CYCLE; TRANSCRIPTIONAL REGULATOR; TRANSCRIPTOME ANALYSIS;

BACTERIA; ENZYME ACTIVITY; GENE EXPRESSION; GENETIC ENGINEERING; GLUCOSE; METABOLISM; PHOSPHORYLATION;

SILICON ALLOYS;

ACETYL COENZYME A; GLUCOSE 6 PHOSPHATE DEHYDROGENASE; GLYCOGEN; GLYCOGEN PHOSPHORYLASE; ISOAMYLASE; PENTOSE PHOSPHATE; PHOSPHOGLUCONATE DEHYDROGENASE; PROTEIN SIGE; SIGMA FACTOR; TRANSCRIPTOME; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL STRAIN; BACTERIUM CULTURE; CATABOLISM; CITRIC ACID CYCLE; CONTROLLED STUDY; GENE; GENE EXPRESSION; GENETIC ENGINEERING; IMMUNOBLOTTING; LIGHT; METABOLOME; NONHUMAN; PRIORITY JOURNAL; SIGNAL TRANSDUCTION; SUGAR CATABOLIC GENE; SYNECHOCYSTIS;

BACTERIAL PROTEINS; CARBOHYDRATES; CARBON; CYANOBACTERIA; ELECTROPHORESIS, CAPILLARY; GENE EXPRESSION REGULATION, BACTERIAL; GENETIC ENGINEERING; GLYCOGEN; MASS SPECTROMETRY; MODELS, GENETIC; PHOTOSYSTEM II PROTEIN COMPLEX; SIGMA FACTOR; SIGNAL TRANSDUCTION; SYNECHOCYSTIS; TRANSCRIPTION, GENETIC;

PHOTOBACTERIA; SIGE; SYNECHOCYSTIS; SYNECHOCYSTIS SP.; SYNECHOCYSTIS SP. PCC 6803;

EID: 80052194657     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M111.231183     Document Type: Article

References (34)

1. Kaneko, T., Sato, S., Kotani, H., Tanaka, A., Asamizu, E., Nakamura, Y., Miyajima, N., Hirosawa, M., Sugiura, M., Sasamoto, S., Kimura, T., Hosouchi, T., Matsuno, A., Muraki, A., Nakazaki, N., Naruo, K., Okumura, S., Shimpo, S., Takeuchi, C., Wada, T., Watanabe, A., Yamada, M., Yasuda, M., and Tabata, S. (1996) DNA Res. 3, 185-209
2. Takahashi, H., Uchimiya, H., and Hihara, Y. (2008) J. Exp. Bot. 59, 3009-3018
3. Laurent, S., Jang, J., Janicki, A., Zhang, C. C., and Bédu, S. (2008) Microbiology 154, 2161-2167
4. Eisenhut, M., Huege, J., Schwarz, D., Bauwe, H., Kopka, J., and Hagemann, M. (2008) Plant Physiol. 148, 2109-2120
5. Schaaff, I., Heinisch, J., and Zimmermann, F. K. (1989) Yeast 5, 285-290
6. Yanagisawa, S., Akiyama, A., Kisaka, H., Uchimiya, H., and Miwa, T. (2004) Proc. Natl. Acad. Sci. U.S.A. 101, 7833-7838
7. Osanai, T., Azuma, M., and Tanaka, K. (2007) Photochem. Photobiol. Sci. 6, 508-514
8. Fu, J., and Xu, X. (2006) FEMS Microbiol. Lett. 260, 201-209
9. Yang, C., Hua, Q., and Shimizu, K. (2002) Appl. Microbiol. Biotechnol. 58, 813-822
10. Hagen, K. D., and Meeks, J. C. (2001) J. Biol. Chem. 276, 11477-11486
11. Min, H., and Golden, S. S. (2000) J. Bacteriol. 182, 6214-6221
12. Osanai, T., Kanesaki, Y., Nakano, T., Takahashi, H., Asayama, M., Shirai, M., Kanehisa, M., Suzuki, I., Murata, N., and Tanaka, K. (2005) J. Biol. Chem. 280, 30653-30659
13. Kucho, K., Okamoto, K., Tsuchiya, Y., Nomura, S., Nango, M., Kanehisa, M., and Ishiura, M. (2005) J. Bacteriol. 187, 2190-2199
14. Osanai, T., Imamura, S., Asayama, M., Shirai, M., Suzuki, I., Murata, N., and Tanaka, K. (2006) DNA Res. 13, 185-195
15. Tanaka, K., Takayanagi, Y., Fujita, N., Ishihama, A., and Takahashi, H. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 3511-3515
16. Osanai, T., Ikeuchi, M., and Tanaka, K. (2008) Physiol. Plant. 133, 490-506
17. Osanai, T., Imashimizu, M., Seki, A., Sato, S., Tabata, S., Imamura, S., Asayama, M., Ikeuchi, M., and Tanaka, K. (2009) Proc. Natl. Acad. Sci. U.S.A. 106, 6860-6865
18. Williams, J. G. (1988) Methods Enzymol. 167, 766-778
19. Rippka, R. (1988) Methods Enzymol. 167, 3-27
20. Satoh, S., Ikeuchi, M., Mimuro, M., and Tanaka, A. (2001) J. Biol. Chem. 276, 4293-4297
21. Los, D. A., Ray, M. K., and Murata, N. (1997) Mol. Microbiol. 25, 1167-1175
22. Ohkama-Ohtsu, N., Oikawa, A., Zhao, P., Xiang, C., Saito, K., and Oliver, D. J. (2008) Plant Physiol. 148, 1603-1613
23. Koksharova, O., Schubert, M., Shestakov, S., and Cerff, R. (1998) Plant Mol. Biol. 36, 183-194
24. Singh, A. K., and Sherman, L. A. (2005) J. Bacteriol. 187, 2368-2376
25. Tabei, Y., Okada, K., and Tsuzuki, M. (2007) Biochem. Biophys. Res. Commun. 355, 1045-1050
26. Azuma, M., Osanai, T., Hirai, M. Y., and Tanaka, K. (2011) Plant Cell Physiol. 52, 404-412
27. Summerfield, T. C., and Sherman, L. A. (2007) J. Bacteriol. 189, 7829-7840
28. Sundaram, S., Karakaya, H., Scanlan, D. J., and Mann, N. H. (1998) Microbiology 144, 1549-1556
29. Perez-Perez, M. E., Florencio, F. J., and Lindahl, M. (2006) Proteomics 1, (suppl.) 186-195
30. Pérez-Pérez, M. E., Martín-Figueroa, E., and Florencio, F. J. (2009) Mol. Plant 2, 270-283
31. Singh, A. K., Summerfield, T. C., Li, H., and Sherman, L. A. (2006) Arch. Microbiol. 186, 273-286
32. Pollari, M., Gunnelius, L., Tuominen, I., Ruotsalainen, V., Tyystjärvi, E., Salminen, T., and Tyystjärvi, T. (2008) Plant Physiol. 147, 1994-2005
33. Causey, T. B., Shanmugam, K. T., Yomano, L. P., and Ingram, L. O. (2004) Proc. Natl. Acad. Sci. U.S.A. 101, 2235-2240
34. Kadner, R. J., Murphy, G. P., and Stephens, C. M. (1992) J. Gen. Microbiol. 138, 2007-2014