메뉴 건너뛰기




Volumn 21, Issue 4, 2011, Pages 488-494

Microbial chemical factories: Recent advances in pathway engineering for synthesis of value added chemicals

Author keywords

[No Author keywords available]

Indexed keywords

2 KETOISOVALERATE DECARBOXYLASE IV; CARBOXYLYASE; FARNESYL TRANS TRANSFERASE; GERANYLGERANYL PYROPHOSPHATE; LEVOPIMARADIENE SYNTHASE; NICOTINAMIDE ADENINE DINUCLEOTIDE; NICOTINAMIDE ADENINE DINUCLEOTIDE (PHOSPHATE) TRANSHYDROGENASE; OXOACID; POLYHYDROXYALKANOATE SYNTHASE; POLYHYDROXYALKANOIC ACID; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; SYNTHETASE; UNCLASSIFIED DRUG;

EID: 80052126826     PISSN: 0959440X     EISSN: 1879033X     Source Type: Journal    
DOI: 10.1016/j.sbi.2011.05.001     Document Type: Review
Times cited : (37)

References (48)
  • 1
    • 84855724018 scopus 로고    scopus 로고
    • BP Statistical Review of World Energy, June on World Wide Web URL:
    • BP Statistical Review of World Energy, June 2010 on World Wide Web URL: http://www.bp.com/statisticalreview.
    • (2010)
  • 2
    • 53049109464 scopus 로고    scopus 로고
    • De novo biosynthetic pathways: rational design of microbial chemical factories
    • Prather K.L.J., Martin C.H. De novo biosynthetic pathways: rational design of microbial chemical factories. Curr Opin Biotechnol 2008, 19:468.
    • (2008) Curr Opin Biotechnol , vol.19 , pp. 468
    • Prather, K.L.J.1    Martin, C.H.2
  • 3
    • 62649122977 scopus 로고    scopus 로고
    • Synthetic metabolism: engineering biology at the protein and pathway scales
    • Martin C.H., Nielsen D.R., Solomon K.V., Prather K.L.J. Synthetic metabolism: engineering biology at the protein and pathway scales. Chem Biol 2009, 16:277.
    • (2009) Chem Biol , vol.16 , pp. 277
    • Martin, C.H.1    Nielsen, D.R.2    Solomon, K.V.3    Prather, K.L.J.4
  • 4
    • 70350508288 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for the production of putrescine: a four carbon diamine
    • Qian Z.G., Xia X.X., Lee S.Y. Metabolic engineering of Escherichia coli for the production of putrescine: a four carbon diamine. Biotechnol Bioeng 2009, 104:651-662.
    • (2009) Biotechnol Bioeng , vol.104 , pp. 651-662
    • Qian, Z.G.1    Xia, X.X.2    Lee, S.Y.3
  • 5
    • 78649434619 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for the production of cadaverine: a five carbon diamine
    • Qian Z.G., Xia X.X., Lee S.Y. Metabolic engineering of Escherichia coli for the production of cadaverine: a five carbon diamine. Biotechnol Bioeng 2011, 108:93-103.
    • (2011) Biotechnol Bioeng , vol.108 , pp. 93-103
    • Qian, Z.G.1    Xia, X.X.2    Lee, S.Y.3
  • 6
    • 78049430020 scopus 로고    scopus 로고
    • Metabolic engineering of Saccharomyces cerevisiae for the biotechnological production of succinic acid
    • Raab A.M., Gebhardt G., Bolotina N., Weuster-Botz D., Lang C. Metabolic engineering of Saccharomyces cerevisiae for the biotechnological production of succinic acid. Metab Eng 2010, 12:518-525.
    • (2010) Metab Eng , vol.12 , pp. 518-525
    • Raab, A.M.1    Gebhardt, G.2    Bolotina, N.3    Weuster-Botz, D.4    Lang, C.5
  • 7
    • 77955716950 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for the production of succinate from glycerol
    • Blankschien M.D., Clomburg J., Gonzalez R. Metabolic engineering of Escherichia coli for the production of succinate from glycerol. Metab Eng 2010, 12:409-419.
    • (2010) Metab Eng , vol.12 , pp. 409-419
    • Blankschien, M.D.1    Clomburg, J.2    Gonzalez, R.3
  • 8
    • 66249112842 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli for enhanced production of (R)- and (S)-3-hydroxybutyrate
    • Tseng H.C., Martin C.H., Nielsen D.R., Prather K.L. Metabolic engineering of Escherichia coli for enhanced production of (R)- and (S)-3-hydroxybutyrate. Appl Environ Microbiol 2009, 75:3137-3145.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 3137-3145
    • Tseng, H.C.1    Martin, C.H.2    Nielsen, D.R.3    Prather, K.L.4
  • 9
    • 78649326953 scopus 로고    scopus 로고
    • Biosynthesis of chiral 3-hydroxyvalerate from single propionate-unrelated carbon sources in metabolically engineered E. coli
    • Tseng H.-C., Harwell C., Martin C., Prather K: Biosynthesis of chiral 3-hydroxyvalerate from single propionate-unrelated carbon sources in metabolically engineered E. coli. Microb Cell Factories 2010, 9:96.
    • (2010) Microb Cell Factories , vol.9 , pp. 96
    • Tseng, H.-C.1    Harwell, C.2    Martin, C.3    Prather, K.4
  • 10
    • 77956296603 scopus 로고    scopus 로고
    • Native-sized recombinant spider silk protein produced in metabolically engineered Escherichia coli results in a strong fiber
    • Xia X.X., Qian Z.G., Ki C.S., Park Y.H., Kaplan D.L., Lee S.Y. Native-sized recombinant spider silk protein produced in metabolically engineered Escherichia coli results in a strong fiber. Proc Natl Acad Sci U S A 2010, 107:14059-14063.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 14059-14063
    • Xia, X.X.1    Qian, Z.G.2    Ki, C.S.3    Park, Y.H.4    Kaplan, D.L.5    Lee, S.Y.6
  • 12
    • 58149261887 scopus 로고    scopus 로고
    • Directing vanillin production from ferulic acid by increased acetyl-CoA consumption in recombinant Escherichia coli
    • Lee E.G., Yoon S.H., Das A., Lee S.H., Li C., Kim J.Y., Choi M.S., Oh D.K., Kim S.W. Directing vanillin production from ferulic acid by increased acetyl-CoA consumption in recombinant Escherichia coli. Biotechnol Bioeng 2009, 102:200-208.
    • (2009) Biotechnol Bioeng , vol.102 , pp. 200-208
    • Lee, E.G.1    Yoon, S.H.2    Das, A.3    Lee, S.H.4    Li, C.5    Kim, J.Y.6    Choi, M.S.7    Oh, D.K.8    Kim, S.W.9
  • 14
    • 55549116661 scopus 로고    scopus 로고
    • Optimization of the mevalonate-based isoprenoid biosynthetic pathway in Escherichia coli for production of the anti-malarial drug precursor amorpha-4,11-diene
    • Anthony J.R., Anthony L.C., Nowroozi F., Kwon G., Newman J.D., Keasling J.D. Optimization of the mevalonate-based isoprenoid biosynthetic pathway in Escherichia coli for production of the anti-malarial drug precursor amorpha-4,11-diene. Metab Eng 2009, 11:13-19.
    • (2009) Metab Eng , vol.11 , pp. 13-19
    • Anthony, J.R.1    Anthony, L.C.2    Nowroozi, F.3    Kwon, G.4    Newman, J.D.5    Keasling, J.D.6
  • 15
    • 77950863739 scopus 로고    scopus 로고
    • Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. coli
    • Moon T.S., Dueber J.E., Shiue E., Prather K.L.J. Use of modular, synthetic scaffolds for improved production of glucaric acid in engineered E. coli. Metab Eng 2010, 12:298.
    • (2010) Metab Eng , vol.12 , pp. 298
    • Moon, T.S.1    Dueber, J.E.2    Shiue, E.3    Prather, K.L.J.4
  • 16
    • 70449533072 scopus 로고    scopus 로고
    • Metabolic engineering of the complete pathway leading to heterologous biosynthesis of various flavonoids and stilbenoids in Saccharomyces cerevisiae
    • Trantas E., Panopoulos N., Ververidis F. Metabolic engineering of the complete pathway leading to heterologous biosynthesis of various flavonoids and stilbenoids in Saccharomyces cerevisiae. Metab Eng 2009, 11:355-366.
    • (2009) Metab Eng , vol.11 , pp. 355-366
    • Trantas, E.1    Panopoulos, N.2    Ververidis, F.3
  • 17
    • 77951531018 scopus 로고    scopus 로고
    • Enhancement of farnesyl diphosphate pool as direct precursor of sesquiterpenes through metabolic engineering of the mevalonate pathway in Saccharomyces cerevisiae
    • Asadollahi M.A., Maury J., Schalk M., Clark A., Nielsen J. Enhancement of farnesyl diphosphate pool as direct precursor of sesquiterpenes through metabolic engineering of the mevalonate pathway in Saccharomyces cerevisiae. Biotechnol Bioeng 2010, 106:86-96.
    • (2010) Biotechnol Bioeng , vol.106 , pp. 86-96
    • Asadollahi, M.A.1    Maury, J.2    Schalk, M.3    Clark, A.4    Nielsen, J.5
  • 19
    • 77953623874 scopus 로고    scopus 로고
    • Enzyme promiscuity: a mechanistic and evolutionary perspective
    • Khersonsky O., Tawfik D.S. Enzyme promiscuity: a mechanistic and evolutionary perspective. Annu Rev Biochem 2010, 79(79):471-505.
    • (2010) Annu Rev Biochem , vol.79 , Issue.79 , pp. 471-505
    • Khersonsky, O.1    Tawfik, D.S.2
  • 20
    • 65249143885 scopus 로고    scopus 로고
    • Enzyme (re)design: lessons from natural evolution and computation
    • Gerlt J.A., Babbitt P.C. Enzyme (re)design: lessons from natural evolution and computation. Curr Opin Chem Biol 2009, 13:10-18.
    • (2009) Curr Opin Chem Biol , vol.13 , pp. 10-18
    • Gerlt, J.A.1    Babbitt, P.C.2
  • 21
    • 68049106179 scopus 로고    scopus 로고
    • Directed evolution drives the next generation of biocatalysts
    • Turner N.J. Directed evolution drives the next generation of biocatalysts. Nat Chem Biol 2009, 5:567.
    • (2009) Nat Chem Biol , vol.5 , pp. 567
    • Turner, N.J.1
  • 22
    • 16244379809 scopus 로고    scopus 로고
    • Enhancing catalytic promiscuity for biocatalysis
    • Kazlauskas R.J. Enhancing catalytic promiscuity for biocatalysis. Curr Opin Chem Biol 2005, 9:195-201.
    • (2005) Curr Opin Chem Biol , vol.9 , pp. 195-201
    • Kazlauskas, R.J.1
  • 24
    • 77950899704 scopus 로고    scopus 로고
    • Expanding metabolism for total biosynthesis of the nonnatural amino acid l-homoalanine
    • Zhang K.C., Li H., Cho K.M., Liao J.C. Expanding metabolism for total biosynthesis of the nonnatural amino acid l-homoalanine. Proc Natl Acad Sci U S A 2010, 107:6234-6239.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 6234-6239
    • Zhang, K.C.1    Li, H.2    Cho, K.M.3    Liao, J.C.4
  • 25
    • 38049001166 scopus 로고    scopus 로고
    • Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels
    • Atsumi S., Hanai T., Liao J.C. Non-fermentative pathways for synthesis of branched-chain higher alcohols as biofuels. Nature 2008, 451:U13-86.
    • (2008) Nature , vol.451
    • Atsumi, S.1    Hanai, T.2    Liao, J.C.3
  • 30
    • 77955353890 scopus 로고    scopus 로고
    • Molecular signatures-based prediction of enzyme promiscuity
    • Carbonell P., Faulon JL Molecular signatures-based prediction of enzyme promiscuity. Bioinformatics 2010, 26:2012-2019.
    • (2010) Bioinformatics , vol.26 , pp. 2012-2019
    • Carbonell, P.1    Faulon, J.L.2
  • 31
    • 79954952536 scopus 로고    scopus 로고
    • Tailor-made type II 'Pseudomonas' PHA synthases and their use for the biosynthesis of polylactic acid and its copolymer in recombinant 'Escherichia coli'
    • Yang T., Jung Y., Kang H., Kim T., Park S., Lee S. Tailor-made type II 'Pseudomonas' PHA synthases and their use for the biosynthesis of polylactic acid and its copolymer in recombinant 'Escherichia coli'. Appl Microbiol Biotechnol 2011, 90:603.
    • (2011) Appl Microbiol Biotechnol , vol.90 , pp. 603
    • Yang, T.1    Jung, Y.2    Kang, H.3    Kim, T.4    Park, S.5    Lee, S.6
  • 32
    • 77953569307 scopus 로고    scopus 로고
    • Motif-based search for a novel fructosyl peptide oxidase from genome databases
    • Kim S., Ferri S., Tsugawa W., Mori K., Sode K. Motif-based search for a novel fructosyl peptide oxidase from genome databases. Biotechnol Bioeng 2010, 106:358.
    • (2010) Biotechnol Bioeng , vol.106 , pp. 358
    • Kim, S.1    Ferri, S.2    Tsugawa, W.3    Mori, K.4    Sode, K.5
  • 34
    • 68449103617 scopus 로고    scopus 로고
    • Stabilized gene duplication enables long-term selection-free heterologous pathway expression
    • Tyo K.E.J., Ajikumar P.K., Stephanopoulos G. Stabilized gene duplication enables long-term selection-free heterologous pathway expression. Nature Biotechnol 2009, 27:U115-760.
    • (2009) Nature Biotechnol , vol.27
    • Tyo, K.E.J.1    Ajikumar, P.K.2    Stephanopoulos, G.3
  • 39
    • 66749161542 scopus 로고    scopus 로고
    • Genomics enabled approaches in strain engineering
    • Warner J.R., Patnaik R., Gill R.T. Genomics enabled approaches in strain engineering. Curr Opin Microbiol 2009, 12:223-230.
    • (2009) Curr Opin Microbiol , vol.12 , pp. 223-230
    • Warner, J.R.1    Patnaik, R.2    Gill, R.T.3
  • 40
    • 33845948161 scopus 로고    scopus 로고
    • SCALEs: multiscale analysis of library enrichment
    • Lynch M.D., Warnecke T., Gill R.T. SCALEs: multiscale analysis of library enrichment. Nature Methods 2007, 4:87-93.
    • (2007) Nature Methods , vol.4 , pp. 87-93
    • Lynch, M.D.1    Warnecke, T.2    Gill, R.T.3
  • 41
    • 0036663710 scopus 로고    scopus 로고
    • Metabolic engineering of Escherichia coli: increase of NADH availability by overexpressing an NAD(+)-dependent formate dehydrogenase
    • Berrios-Rivera S.J., Bennett G.N., San K.Y. Metabolic engineering of Escherichia coli: increase of NADH availability by overexpressing an NAD(+)-dependent formate dehydrogenase. Metab Eng 2002, 4:217-229.
    • (2002) Metab Eng , vol.4 , pp. 217-229
    • Berrios-Rivera, S.J.1    Bennett, G.N.2    San, K.Y.3
  • 43
    • 76749151341 scopus 로고    scopus 로고
    • Improving NADPH availability for natural product biosynthesis in Escherichia coli by metabolic engineering
    • Chemler J.A., Fowler Z.L., McHugh K.P., Koffas M.A.G. Improving NADPH availability for natural product biosynthesis in Escherichia coli by metabolic engineering. Metab Eng 2010, 12:96-104.
    • (2010) Metab Eng , vol.12 , pp. 96-104
    • Chemler, J.A.1    Fowler, Z.L.2    McHugh, K.P.3    Koffas, M.A.G.4
  • 44
    • 77955429093 scopus 로고    scopus 로고
    • High NADPH/NADP(+) ratio improves thymidine production by a metabolically engineered Escherichia coli strain
    • Lee H.C., Kim J.S., Jang W., Kim S.Y. High NADPH/NADP(+) ratio improves thymidine production by a metabolically engineered Escherichia coli strain. J Biotechnol 2010, 149:24-32.
    • (2010) J Biotechnol , vol.149 , pp. 24-32
    • Lee, H.C.1    Kim, J.S.2    Jang, W.3    Kim, S.Y.4
  • 45
    • 33646045867 scopus 로고    scopus 로고
    • Effect of overexpression of a soluble pyridine nucleotide transhydrogenase (UdhA) on the production of poly(3-hydroxybutyrate) in Escherichia coli
    • Sanchez A.M., Andrews J., Hussein I., Bennett G.N., San K.Y. Effect of overexpression of a soluble pyridine nucleotide transhydrogenase (UdhA) on the production of poly(3-hydroxybutyrate) in Escherichia coli. Biotechnol Prog 2006, 22:420-425.
    • (2006) Biotechnol Prog , vol.22 , pp. 420-425
    • Sanchez, A.M.1    Andrews, J.2    Hussein, I.3    Bennett, G.N.4    San, K.Y.5
  • 46
    • 63549111090 scopus 로고    scopus 로고
    • Simultaneous synthesis of 2-phenylethanol and l-homophenylalanine using aromatic transaminase with yeast Ehrlich pathway
    • Hwang J.Y., Park J., Seo J.H., Cha M., Cho B.K., Kim J., Kim B.G. Simultaneous synthesis of 2-phenylethanol and l-homophenylalanine using aromatic transaminase with yeast Ehrlich pathway. Biotechnol Bioeng 2009, 102:1323-1329.
    • (2009) Biotechnol Bioeng , vol.102 , pp. 1323-1329
    • Hwang, J.Y.1    Park, J.2    Seo, J.H.3    Cha, M.4    Cho, B.K.5    Kim, J.6    Kim, B.G.7
  • 47
    • 68049091805 scopus 로고    scopus 로고
    • Engineering of a matched pair of xylose reductase and xylitol dehydrogenase for xylose fermentation by Saccharomyces cerevisiae
    • Krahulec S., Klimacek M., Nidetzky B. Engineering of a matched pair of xylose reductase and xylitol dehydrogenase for xylose fermentation by Saccharomyces cerevisiae. Biotechnol J 2009, 4:684-694.
    • (2009) Biotechnol J , vol.4 , pp. 684-694
    • Krahulec, S.1    Klimacek, M.2    Nidetzky, B.3
  • 48
    • 70349319678 scopus 로고    scopus 로고
    • Reversal of coenzyme specificity of 2,3-butanediol dehydrogenase from Saccharomyces cerevisae and in vivo functional analysis
    • Ehsani M., Fernandez M.R., Biosca J.A., Dequin S. Reversal of coenzyme specificity of 2,3-butanediol dehydrogenase from Saccharomyces cerevisae and in vivo functional analysis. Biotechnol Bioeng 2009, 104:381-389.
    • (2009) Biotechnol Bioeng , vol.104 , pp. 381-389
    • Ehsani, M.1    Fernandez, M.R.2    Biosca, J.A.3    Dequin, S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.