-
1
-
-
0242607587
-
Phylogenetic invariants for the general Markov model of sequence mutation
-
Allman E., Rhodes J. Phylogenetic invariants for the general Markov model of sequence mutation. Math. Biosci. 2003, 186(2):113-144.
-
(2003)
Math. Biosci.
, vol.186
, Issue.2
, pp. 113-144
-
-
Allman, E.1
Rhodes, J.2
-
2
-
-
33745625661
-
The identifiability of tree topology for phylogenetic models, including covarion and mixture models
-
Allman E., Rhodes J. The identifiability of tree topology for phylogenetic models, including covarion and mixture models. J. Comput. Biol. 2006, 13:1101-1113.
-
(2006)
J. Comput. Biol.
, vol.13
, pp. 1101-1113
-
-
Allman, E.1
Rhodes, J.2
-
3
-
-
38849106185
-
Phylogenetic ideals and varieties for the general Markov model
-
Allman E., Rhodes J. Phylogenetic ideals and varieties for the general Markov model. Adv. in Appl. Math. 2007, 40:127-148.
-
(2007)
Adv. in Appl. Math.
, vol.40
, pp. 127-148
-
-
Allman, E.1
Rhodes, J.2
-
4
-
-
37349112112
-
Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites
-
Allman E., Rhodes J. Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites. Math. Biosci. 2008, 211:18-33.
-
(2008)
Math. Biosci.
, vol.211
, pp. 18-33
-
-
Allman, E.1
Rhodes, J.2
-
5
-
-
0023359361
-
Asynchronous distance between homologous DNA sequences
-
Barry D., Hartigan J. Asynchronous distance between homologous DNA sequences. Biometrics 1987, 43(2):261-276.
-
(1987)
Biometrics
, vol.43
, Issue.2
, pp. 261-276
-
-
Barry, D.1
Hartigan, J.2
-
6
-
-
0002074731
-
The recovery of trees from measures of dissimilarity
-
Edinburgh University Press, D.G. Kendall, P. Tautu (Eds.)
-
Buneman P. The recovery of trees from measures of dissimilarity. Mathematics in the Archaeological and Historical Sciences 1971, 387-395. Edinburgh University Press. D.G. Kendall, P. Tautu (Eds.).
-
(1971)
Mathematics in the Archaeological and Historical Sciences
, pp. 387-395
-
-
Buneman, P.1
-
7
-
-
33845880639
-
Performance of a new invariants method on homogeneous and nonhomogeneous quartet trees
-
Casanellas M., Fernandez-Sanchez J. Performance of a new invariants method on homogeneous and nonhomogeneous quartet trees. Mol. Biol. Evol. 2007, 24(1):288-293.
-
(2007)
Mol. Biol. Evol.
, vol.24
, Issue.1
, pp. 288-293
-
-
Casanellas, M.1
Fernandez-Sanchez, J.2
-
9
-
-
84926074258
-
Catalog of small trees
-
Cambridge University Press, (Ch. 15), L. Pachter, B. Sturmfels (Eds.)
-
Casanellas M., Garcia L., Sullivant S. Catalog of small trees. Algebraic Statistics for Computational Biology 2005, Cambridge University Press, (Ch. 15). L. Pachter, B. Sturmfels (Eds.).
-
(2005)
Algebraic Statistics for Computational Biology
-
-
Casanellas, M.1
Garcia, L.2
Sullivant, S.3
-
11
-
-
0001899693
-
Invariants of phylogenies in a simple case with discrete states
-
Cavender J., Felsenstein J. Invariants of phylogenies in a simple case with discrete states. J. Classification 1987, 4:57-71.
-
(1987)
J. Classification
, vol.4
, pp. 57-71
-
-
Cavender, J.1
Felsenstein, J.2
-
12
-
-
67349239392
-
On the ideals of equivariants tree models
-
Draisma J., Kuttler J. On the ideals of equivariants tree models. Math. Ann. 2009, 344:619-644.
-
(2009)
Math. Ann.
, vol.344
, pp. 619-644
-
-
Draisma, J.1
Kuttler, J.2
-
13
-
-
33745627269
-
Tree construction using singular value decomposition
-
Cambridge University Press, (Ch. 19), L. Pachter, B. Sturmfels (Eds.)
-
Eriksson N. Tree construction using singular value decomposition. Algebraic Statistics for Computational Biology 2005, 347-358. Cambridge University Press, (Ch. 19). L. Pachter, B. Sturmfels (Eds.).
-
(2005)
Algebraic Statistics for Computational Biology
, pp. 347-358
-
-
Eriksson, N.1
-
14
-
-
0026079423
-
Counting phylogenetic invariants in some simple cases
-
Felsenstein J. Counting phylogenetic invariants in some simple cases. J. Theoret. Biol. 1991, 152:357-376.
-
(1991)
J. Theoret. Biol.
, vol.152
, pp. 357-376
-
-
Felsenstein, J.1
-
15
-
-
0003198583
-
Representation Theory
-
Springer, New York, (A first course, Readings in Mathematics)
-
Fulton W., Harris J. Representation Theory. Graduate Texts in Mathematics 1991, vol. 129. Springer, New York, p. 551 (A first course, Readings in Mathematics).
-
(1991)
Graduate Texts in Mathematics
, vol.129
, pp. 551
-
-
Fulton, W.1
Harris, J.2
-
16
-
-
80052038892
-
Algebraic statistics in model selection
-
M. Chickering, J. Halpern (Eds.), Proceedings of the 20th Conference on Uncertainty in Artificial Intelligence.
-
L. Garcia-Puente, Algebraic statistics in model selection, in: M. Chickering, J. Halpern (Eds.), Proceedings of the 20th Conference on Uncertainty in Artificial Intelligence, 2004, pp. 177-184.
-
(2004)
, pp. 177-184
-
-
Garcia-Puente, L.1
-
18
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. J. Mol. Evol. 1980, 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
19
-
-
0001464973
-
Estimation of evolutionary sequences between homologous nucleotide sequences
-
Kimura M. Estimation of evolutionary sequences between homologous nucleotide sequences. Proc. Natl. Acad. Sci. USA 1981, 78:454-458.
-
(1981)
Proc. Natl. Acad. Sci. USA
, vol.78
, pp. 454-458
-
-
Kimura, M.1
-
20
-
-
0023150708
-
A rate-independent technique for analysis of nucleic acid sequences: evolutionary parsimony
-
Lake J. A rate-independent technique for analysis of nucleic acid sequences: evolutionary parsimony. Mol. Biol. Evol. 1987, 4:167-191.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 167-191
-
-
Lake, J.1
-
21
-
-
84926122052
-
-
Cambridge University Press, L. Pachter, B. Sturmfels (Eds.)
-
Algebraic Statistics for Computational Biology 2005, Cambridge University Press. L. Pachter, B. Sturmfels (Eds.).
-
(2005)
Algebraic Statistics for Computational Biology
-
-
-
22
-
-
0003535571
-
-
Springer, New York, (Translated from the second French edition by Leonard L. Scott, Graduate Texts in Mathematics)
-
Serre J. Linear Representations of Finite Groups 1977, Springer, New York, p. 170 (Translated from the second French edition by Leonard L. Scott, Graduate Texts in Mathematics, vol. 42).
-
(1977)
Linear Representations of Finite Groups
, vol.42
, pp. 170
-
-
Serre, J.1
-
23
-
-
43949153645
-
Recovering a tree from the leaf colourations it generates under a Markov model
-
Steel M. Recovering a tree from the leaf colourations it generates under a Markov model. Appl. Math. Lett. 1994, 7:19-24.
-
(1994)
Appl. Math. Lett.
, vol.7
, pp. 19-24
-
-
Steel, M.1
-
24
-
-
38249008297
-
Spectral analysis and a closest tree method for genetic sequences
-
Steel M., Hendy M., Székely L., Erdos P. Spectral analysis and a closest tree method for genetic sequences. Appl. Math. Lett. 1992, 5(6):63-67. 10.1016/0893-9659(92)90016-3.
-
(1992)
Appl. Math. Lett.
, vol.5
, Issue.6
, pp. 63-67
-
-
Steel, M.1
Hendy, M.2
Székely, L.3
Erdos, P.4
-
25
-
-
15944419142
-
Toric ideals of phylogenetic invariants
-
Sturmfels B., Sullivant S. Toric ideals of phylogenetic invariants. J. Comput. Biol. 2005, 12:204-228.
-
(2005)
J. Comput. Biol.
, vol.12
, pp. 204-228
-
-
Sturmfels, B.1
Sullivant, S.2
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