메뉴 건너뛰기




Volumn 32, Issue 6, 2011, Pages 333-342

Predicting human plasma protein binding of drugs using plasma protein interaction QSAR analysis (PPI-QSAR)

Author keywords

human plasma protein binding; inter molecular descriptors; intra molecular descriptors; plasma protein interaction QSAR analysis; prediction

Indexed keywords

AMOXICILLIN; AMPICILLIN; ANTIBIOTIC AGENT; AZIDOCILLIN; AZLOCILLIN; BACAMPICILLIN; CARBENICILLIN; CEFACETRILE; CEFACLOR; CEFADROXIL; CEFALEXIN; CEFAMANDOLE; CEFATRIZINE; CEFAZOLIN; CEFDINIR; CEFIXIME; CEFMETAZOLE; CEFODIZIME; CEFOPERAZONE; CEFORANIDE; CEFOTAXIME; CEFOTETAN; CEFOXITIN; CEFTAZIDIME; CEFTIZOXIME; CEFUROXIME; HUMAN SERUM ALBUMIN; MECILLINAM; PLASMA PROTEIN; UNINDEXED DRUG;

EID: 80051871865     PISSN: 01422782     EISSN: 1099081X     Source Type: Journal    
DOI: 10.1002/bdd.762     Document Type: Article
Times cited : (28)

References (28)
  • 2
    • 60749101939 scopus 로고    scopus 로고
    • Plasma/serum protein binding determinations
    • Banker MJ, Clark TH,. Plasma/serum protein binding determinations. Curr Drug Metab 2008; 9: 854-859.
    • (2008) Curr Drug Metab , vol.9 , pp. 854-859
    • Banker, M.J.1    Clark, T.H.2
  • 3
    • 48949117177 scopus 로고    scopus 로고
    • Structure-ADME relationship: Still a long way to go?
    • DOI 10.1517/17425255.4.6.759
    • Hou T, Wang J,. Structure-ADME relationship: still a long way to go? Expert Opin Drug Metab Toxicol 2008; 4: 759-770. (Pubitemid 352003198)
    • (2008) Expert Opinion on Drug Metabolism and Toxicology , vol.4 , Issue.6 , pp. 759-770
    • Hou, T.1    Wang, J.2
  • 4
    • 0031896612 scopus 로고    scopus 로고
    • Species differences of serum albumins: II. Chemical and thermal stability
    • DOI 10.1023/A:1011932516717
    • Kosa T, Maruyama T, Otagiri M,. Species differences of serum albumins: II. Chemical and thermal stability. Pharm Res 1998; 15: 449-454. (Pubitemid 28175127)
    • (1998) Pharmaceutical Research , vol.15 , Issue.3 , pp. 449-454
    • Kosa, T.1    Maruyama, T.2    Otagiri, M.3
  • 5
    • 0031472928 scopus 로고    scopus 로고
    • Species differences of serum albumins: I. Drug binding sites
    • DOI 10.1023/A:1012138604016
    • Kosa T, Maruyama T, Otagiri M,. Species differences of serum albumins: I. Drug binding sites. Pharm Res 1997; 14: 1607-1612. (Pubitemid 28009214)
    • (1997) Pharmaceutical Research , vol.14 , Issue.11 , pp. 1607-1612
    • Kosa, T.1    Maruyama, T.2    Otagiri, M.3
  • 8
    • 80051878887 scopus 로고    scopus 로고
    • Silico Prediction of Plasma and Tissue Protein Binding
    • Taylor J.B. and Triggle D.J. Editor(s)-in-Chief. Elsevier: Oxford.
    • Colmenarejo G,. In Silico Prediction of Plasma and Tissue Protein Binding, In:, Taylor JB, and, Triggle DJ, Editor(s)-in-Chief. Comprehensive Medicinal Chemistry II. Elsevier: Oxford, 2007; 847-866.
    • (2007) Comprehensive Medicinal Chemistry II , pp. 847-866
    • Colmenarejo, G.1
  • 9
    • 0037404491 scopus 로고    scopus 로고
    • In silico prediction of drug-binding strengths to human serum albumin
    • DOI 10.1002/med.10039
    • Colmenarejo G,. In silico prediction of drug-binding strengths to human serum albumin. Med Res Rev 2003; 23: 275-301. (Pubitemid 36457536)
    • (2003) Medicinal Research Reviews , vol.23 , Issue.3 , pp. 275-301
    • Colmenarejo, G.1
  • 10
    • 0035818919 scopus 로고    scopus 로고
    • Cheminformatic models to predict binding affinities to human serum albumin
    • DOI 10.1021/jm010960b
    • Colmenarejo G, Alvarez-Pedraglio A, Lavandera JL,. Cheminformatic models to predict binding affinities to human serum albumin. J Med Chem 2001; 44: 4370-4378. (Pubitemid 33131662)
    • (2001) Journal of Medicinal Chemistry , vol.44 , Issue.25 , pp. 4370-4378
    • Colmenarejo, G.1    Alvarez-Pedraglio, A.2    Lavandera, J.-L.3
  • 11
    • 0036828938 scopus 로고    scopus 로고
    • Predicting plasma protein binding of drugs: A new approach
    • DOI 10.1016/S0006-2952(02)01074-2, PII S0006295202010742
    • Kratochwil NA, Huber W, Müller F, et al,. Predicting plasma protein binding of drugs: a new approach. Biochem Pharmacol 2002; 64: 1355-1374. (Pubitemid 35248253)
    • (2002) Biochemical Pharmacology , vol.64 , Issue.9 , pp. 1355-1374
    • Kratochwil, N.A.1    Huber, W.2    Muller, F.3    Kansy, M.4    Gerber, P.R.5
  • 12
    • 5444250595 scopus 로고    scopus 로고
    • QSAR models for the prediction of binding affinities to human serum albumin using the heuristic method and a support vector machine
    • Xue CX, Zhang RS, Liu HX, et al,. QSAR models for the prediction of binding affinities to human serum albumin using the heuristic method and a support vector machine. J Chem Inf Comput Sci 2004; 44: 1693-1700.
    • (2004) J Chem Inf Comput Sci , vol.44 , pp. 1693-1700
    • Xue, C.X.1    Zhang, R.S.2    Liu, H.X.3
  • 13
    • 31444445357 scopus 로고    scopus 로고
    • Prediction of plasma protein binding of drugs using Kier-Hall valence connectivity indices and 4D-fingerprint molecular similarity analyses
    • DOI 10.1007/s10822-005-9012-4
    • Liu J, Yang L, Li Y, et al,. Prediction of plasma protein binding of drugs using Kier-Hall valence connectivity indices and 4D-fingerprint molecular similarity analyses. J Comput Aided Mol Des 2005; 19: 567-583. (Pubitemid 43150049)
    • (2005) Journal of Computer-Aided Molecular Design , vol.19 , Issue.8 , pp. 567-583
    • Liu, J.1    Yang, L.2    Li, Y.3    Pan, D.4    Hopfinger, A.J.5
  • 14
    • 28844476608 scopus 로고    scopus 로고
    • Constructing plasma protein binding model based on a combination of cluster analysis and 4D-fingerprint molecular similarity analyses
    • DOI 10.1016/j.bmc.2005.08.035, PII S0968089605007935
    • Liu J, Yang L, Li Y, et al,. Constructing plasma protein binding model based on a combination of cluster analysis and 4D-fingerprint molecular similarity analyses. Bioorg Med Chem 2006; 14: 611-621. (Pubitemid 41767565)
    • (2006) Bioorganic and Medicinal Chemistry , vol.14 , Issue.3 , pp. 611-621
    • Liu, J.1    Yang, L.2    Li, Y.3    Pan, D.4    Hopfinger, A.J.5
  • 15
    • 33746796821 scopus 로고    scopus 로고
    • In silico ADME modelling 2: Computational models to predict human serum albumin binding affinity using ant colony systems
    • DOI 10.1016/j.bmc.2006.02.008, PII S0968089606001428
    • Gunturi SB, Narayanan R, Khandelwal A,. In silico ADME modelling 2: computational models to predict human serum albumin binding affinity using ant colony systems. Bioorg Med Chem 2006; 14: 4118-4129. (Pubitemid 44287812)
    • (2006) Bioorganic and Medicinal Chemistry , vol.14 , Issue.12 , pp. 4118-4129
    • Gunturi, S.B.1    Narayanan, R.2    Khandelwal, A.3
  • 16
    • 34447335391 scopus 로고    scopus 로고
    • ANN-QSAR model of drug-binding to human serum albumin
    • DOI 10.1111/j.1747-0285.2007.00528.x
    • Deeb O, Hemmateenejad B,. ANN-QSAR model of drug-binding to human serum albumin. Chem Biol Drug Des 2007; 70: 19-29. (Pubitemid 47057419)
    • (2007) Chemical Biology and Drug Design , vol.70 , Issue.1 , pp. 19-29
    • Deeb, O.1    Hemmateenejad, B.2
  • 17
    • 33846230530 scopus 로고    scopus 로고
    • Plasma protein binding affinity and its relationship to molecular structure: An in-silico analysis
    • DOI 10.1021/jm060981b
    • Gleeson MP,. Plasma protein binding affinity and its relationship to molecular structure: an in-silico analysis. J Med Chem 2007; 50: 101-112. (Pubitemid 46105503)
    • (2007) Journal of Medicinal Chemistry , vol.50 , Issue.1 , pp. 101-112
    • Gleeson, M.P.1
  • 18
    • 0347717608 scopus 로고    scopus 로고
    • a and AlogP98 values
    • DOI 10.1023/B:MODI.0000006562.93049.36, Structure/Function/SAR and Molecular Design
    • Lobell M, Sivarajah V,. In silico prediction of aqueous solubility, human plasma protein binding and volume of distribution of compounds from calculated pKa and AlogP98 values. Mol Divers 2003; 7: 69-87. (Pubitemid 38095175)
    • (2003) Molecular Diversity , vol.7 , Issue.1 , pp. 69-87
    • Lobell, M.1    Sivarajah, V.2
  • 19
    • 2642548329 scopus 로고    scopus 로고
    • Computational prediction of the plasma protein-binding percent of diverse pharmaceutical compounds
    • DOI 10.1002/jps.20059
    • Yamazaki K, Kanaoka M,. Computational prediction of the plasma protein-binding percent of diverse pharmaceutical compounds. J Pharm Sci 2004; 93: 1480-1494. (Pubitemid 38725020)
    • (2004) Journal of Pharmaceutical Sciences , vol.93 , Issue.6 , pp. 1480-1494
    • Yamazaki, K.1    Kanaoka, M.2
  • 20
    • 33845352185 scopus 로고    scopus 로고
    • QSAR modeling of human serum protein binding with several modeling techniques utilizing structure-information representation
    • DOI 10.1021/jm051245v
    • Votano JR, Parham M, Hall LM, et al,. QSAR modeling of human serum protein binding with several modeling techniques utilizing structure-information representation. J Med Chem 2006; 49: 7169-7181. (Pubitemid 44886002)
    • (2006) Journal of Medicinal Chemistry , vol.49 , Issue.24 , pp. 7169-7181
    • Votano, J.R.1    Parham, M.2    Hall, L.M.3    Hall, L.H.4    Kier, L.B.5    Oloff, S.6    Tropsha, A.7
  • 21
    • 35349020941 scopus 로고    scopus 로고
    • In silico prediction of human plasma protein binding using hologram QSAR
    • DOI 10.2174/157018007781788480
    • Moda TL, Montanari CA, Andricopulo AD,. In silico prediction of human plasma protein binding using hologram QSAR. Lett Drug Des Discov 2007; 4: 502-509. (Pubitemid 47607741)
    • (2007) Letters in Drug Design and Discovery , vol.4 , Issue.7 , pp. 502-509
    • Moda, T.L.1    Montanari, C.A.2    Andricopulo, A.D.3
  • 22
    • 44749088791 scopus 로고    scopus 로고
    • Prediction models of human plasma protein binding rate and oral bioavailability derived by using GA-CG-SVM method
    • Ma CY, Yang SY, Zhang H, et al,. Prediction models of human plasma protein binding rate and oral bioavailability derived by using GA-CG-SVM method. J Pharm Biomed Anal 2008; 47: 677-682.
    • (2008) J Pharm Biomed Anal , vol.47 , pp. 677-682
    • Ma, C.Y.1    Yang, S.Y.2    Zhang, H.3
  • 23
    • 0036536874 scopus 로고    scopus 로고
    • Utilization of SciFinder Scholar at an Undergraduate Institution
    • O'Reilly SA, Wilson AM, Howes B,. Utilization of SciFinder Scholar at an Undergraduate Institution. J Chem Educ 2002; 79: 524-526.
    • (2002) J Chem Educ , vol.79 , pp. 524-526
    • O'Reilly, S.A.1    Wilson, A.M.2    Howes, B.3
  • 24
    • 42449150833 scopus 로고    scopus 로고
    • High quality binding modes in docking ligands to proteins
    • DOI 10.1002/prot.21847
    • Gorelik B, Goldblum A,. High quality binding modes in docking ligands to proteins. Proteins 2008; 71: 1373-1386. (Pubitemid 351564059)
    • (2008) Proteins: Structure, Function and Genetics , vol.71 , Issue.3 , pp. 1373-1386
    • Gorelik, B.1    Goldblum, A.2
  • 25
    • 73649138207 scopus 로고    scopus 로고
    • Exploration of human serum albumin binding sites by docking and molecular dynamics flexible ligand-protein interactions
    • Deeb O, Rosales-Hernández MC, Gõmez-Castro C, et al,. Exploration of human serum albumin binding sites by docking and molecular dynamics flexible ligand-protein interactions. Biopolymers 2010; 93: 161-170.
    • (2010) Biopolymers , vol.93 , pp. 161-170
    • Deeb, O.1    Rosales-Hernández, M.C.2    Gõmez-Castro, C.3
  • 26
    • 21744445084 scopus 로고    scopus 로고
    • A molecular dynamics study of human serum albumin binding sites
    • DOI 10.1016/j.farmac.2005.04.010, PII S0014827X0500087X
    • Artali R, Bombieri G, Calabi L, et al,. A molecular dynamics study of human serum albumin binding sites. Farmaco 2005; 60: 485-495. (Pubitemid 40943387)
    • (2005) Farmaco , vol.60 , Issue.6-7 , pp. 485-495
    • Artali, R.1    Bombieri, G.2    Calabi, L.3    Del Pra, A.4
  • 27
    • 27744590591 scopus 로고    scopus 로고
    • QSAR applicability domain estimation by projection of the training set in descriptor space: A review
    • Jaworska J, Nikolova-Jeliazkova N, Aldenberg T,. QSAR applicability domain estimation by projection of the training set descriptor space: a review. Altern Lab Anim 2005; 33: 445-459. (Pubitemid 41613738)
    • (2005) ATLA Alternatives to Laboratory Animals , vol.33 , Issue.5 , pp. 445-459
    • Jaworska, J.1    Nikolova-Jeliazkova, N.2    Aldenberg, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.