-
1
-
-
0026343547
-
Leader peptidase
-
R.E. Dalbey Leader peptidase Mol. Microbiol. 5 1991 2855 2860 (Pubitemid 21896017)
-
(1991)
Molecular Microbiology
, vol.5
, Issue.12
, pp. 2855-2860
-
-
Dalbey, R.E.1
-
2
-
-
0021856417
-
Signal sequences. The limits of variation
-
DOI 10.1016/0022-2836(85)90046-4
-
G. von Heijne Signal sequences. The limits of variation J. Mol. Biol. 184 1985 99 105 (Pubitemid 15068265)
-
(1985)
Journal of Molecular Biology
, vol.184
, Issue.1
, pp. 99-105
-
-
Von Heijne, G.1
-
3
-
-
0023882692
-
Modulation of folding pathways of exported proteins by the leader sequence
-
S. Park, G. Liu, T.B. Topping, W.H. Cover, and L.L. Randall Modulation of folding pathways of exported proteins by the leader sequence Science 239 1988 1033 1035 (Pubitemid 18094173)
-
(1988)
Science
, vol.239
, Issue.4843
, pp. 1033-1035
-
-
Park, S.1
Liu, G.2
Topping, T.B.3
Cover, W.H.4
Randall, L.L.5
-
4
-
-
1642348275
-
Effect of Signal Peptide on the Stability and Folding Kinetics of Maltose Binding Protein
-
DOI 10.1021/bi0360509
-
K. Beena, J.B. Udgaonkar, and R. Varadarajan Effect of signal peptide on the stability and folding kinetics of maltose binding protein Biochemistry 43 2004 3608 3619 (Pubitemid 38391716)
-
(2004)
Biochemistry
, vol.43
, Issue.12
, pp. 3608-3619
-
-
Beena, K.1
Udgaonkar, J.B.2
Varadarajan, R.3
-
5
-
-
0024363590
-
The precursor of β-lactamase: Purification, properties and folding kinetics
-
A.A. Laminet, and A. Pluckthun The precursor of beta-lactamase: purification, properties and folding kinetics EMBO J. 8 1989 1469 1477 (Pubitemid 19274373)
-
(1989)
EMBO Journal
, vol.8
, Issue.5
, pp. 1469-1477
-
-
Laminet, A.A.1
Pluckthun, A.2
-
6
-
-
17644386832
-
Use of thioredoxin as a reporter to identify a subset of Escherichia coli signal sequences that promote signal recognition particle-dependent translocation
-
DOI 10.1128/JB.187.9.2983-2991.2005
-
D. Huber, D. Boyd, Y. Xia, M.H. Olma, M. Gerstein, and J. Beckwith Use of thioredoxin as a reporter to identify a subset of Escherichia coli signal sequences that promote signal recognition particle-dependent translocation J. Bacteriol. 187 2005 2983 2991 (Pubitemid 40571590)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.9
, pp. 2983-2991
-
-
Huber, D.1
Boyd, D.2
Xia, Y.3
Olma, M.H.4
Gerstein, M.5
Beckwith, J.6
-
7
-
-
0019474499
-
Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes
-
DOI 10.1016/0022-2836(81)90363-6
-
T. Ikemura Correlation between the abundance of Escherichia coli transfer RNAs and the occurrence of the respective codons in its protein genes J. Mol. Biol. 146 1981 1 21 (Pubitemid 11144185)
-
(1981)
Journal of Molecular Biology
, vol.146
, Issue.1
, pp. 1-21
-
-
Ikemura, T.1
-
8
-
-
0030564828
-
Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates
-
DOI 10.1006/jmbi.1996.0428
-
H. Dong, L. Nilsson, and C.G. Kurland Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates J. Mol. Biol. 260 1996 649 663 (Pubitemid 26270960)
-
(1996)
Journal of Molecular Biology
, vol.260
, Issue.5
, pp. 649-663
-
-
Dong, H.1
Nilsson, L.2
Kurland, C.G.3
-
9
-
-
0024962419
-
Rates of aminoacyl-tRNA selection at 29 sense codons in vivo
-
J.F. Curran, and M. Yarus Rates of aminoacyl-tRNA selection at 29 sense codons in vivo J. Mol. Biol. 209 1989 65 77
-
(1989)
J. Mol. Biol.
, vol.209
, pp. 65-77
-
-
Curran, J.F.1
Yarus, M.2
-
10
-
-
0026409389
-
Absolute in vivo translation rates of individual codons in Escherichia coli: The two glutamic acid codons GAA and GAG are translated with a threefold difference in rate
-
M.A. Sorensen, and S. Pedersen Absolute in vivo translation rates of individual codons in Escherichia coli. The two glutamic acid codons GAA and GAG are translated with a threefold difference in rate J. Mol. Biol. 222 1991 265 280 (Pubitemid 121004006)
-
(1991)
Journal of Molecular Biology
, vol.222
, Issue.2
, pp. 265-280
-
-
Sorensen, M.A.1
Pedersen, S.2
-
11
-
-
0028899217
-
Decoding with the A:I wobble pair is inefficient
-
J.F. Curran Decoding with the A:I wobble pair is inefficient Nucleic Acids Res. 23 1995 683 688
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 683-688
-
-
Curran, J.F.1
-
12
-
-
4444356342
-
Whole genome analysis reveals a high incidence of non-optimal codons in secretory signal sequences of Escherichia coli
-
DOI 10.1016/j.bbrc.2004.08.022, PII S0006291X04017504
-
P.M. Power, R.A. Jones, I.R. Beacham, C. Bucholtz, and M.P. Jennings Whole genome analysis reveals a high incidence of non-optimal codons in secretory signal sequences of Escherichia coli Biochem. Biophys. Res. Commun. 322 2004 1038 1044 (Pubitemid 39164458)
-
(2004)
Biochemical and Biophysical Research Communications
, vol.322
, Issue.3
, pp. 1038-1044
-
-
Power, P.M.1
Jones, R.A.2
Beacham, I.R.3
Bucholtz, C.4
Jennings, M.P.5
-
13
-
-
33746878779
-
Whole genome analysis of non-optimal codon usage in secretory signal sequences of Streptomyces coelicolor
-
DOI 10.1016/j.biosystems.2006.02.006, PII S0303264706000360
-
Y.D. Li, Y.Q. Li, J.S. Chen, H.J. Dong, W.J. Guan, and H. Zhou Whole genome analysis of non-optimal codon usage in secretory signal sequences of Streptomyces coelicolor Biosystems 85 2006 225 230 (Pubitemid 44190134)
-
(2006)
BioSystems
, vol.85
, Issue.3
, pp. 225-230
-
-
Li, Y.-D.1
Li, Y.-Q.2
Chen, J.-s.3
Dong, H.-j.4
Guan, W.-J.5
Zhou, H.6
-
14
-
-
33847076187
-
Experimental confirmation of a key role for non-optimal codons in protein export
-
DOI 10.1016/j.bbrc.2007.01.126, PII S0006291X07001775
-
Y.M. Zalucki, and M.P. Jennings Experimental confirmation of a key role for non-optimal codons in protein export Biochem. Biophys. Res. Commun. 355 2007 143 148 (Pubitemid 46273377)
-
(2007)
Biochemical and Biophysical Research Communications
, vol.355
, Issue.1
, pp. 143-148
-
-
Zalucki, Y.M.1
Jennings, M.P.2
-
15
-
-
37549050221
-
Secretory signal sequence non-optimal codons are required for expression and export of β-lactamase
-
DOI 10.1016/j.bbrc.2007.11.093, PII S0006291X07025247
-
Y.M. Zalucki, K.L. Gittins, and M.P. Jennings Secretory signal sequence non-optimal codons are required for expression and export of beta-lactamase Biochem. Biophys. Res. Commun. 366 2008 135 141 (Pubitemid 50008465)
-
(2008)
Biochemical and Biophysical Research Communications
, vol.366
, Issue.1
, pp. 135-141
-
-
Zalucki, Y.M.1
Gittins, K.L.2
Jennings, M.P.3
-
16
-
-
77952541173
-
Signal sequence non-optimal codons are required for the correct folding of mature maltose binding protein
-
Y.M. Zalucki, C.E. Jones, P.S. Ng, B.L. Schulz, and M.P. Jennings Signal sequence non-optimal codons are required for the correct folding of mature maltose binding protein Biochim. Biophys. Acta 1798 2010 1244 1249
-
(2010)
Biochim. Biophys. Acta
, vol.1798
, pp. 1244-1249
-
-
Zalucki, Y.M.1
Jones, C.E.2
Ng, P.S.3
Schulz, B.L.4
Jennings, M.P.5
-
17
-
-
0024294402
-
The antifolding activity of SecB promotes the export of the E. coli maltose-binding protein
-
D.N. Collier, V.A. Bankaitis, J.B. Weiss, and P.J. Bassford Jr. The antifolding activity of SecB promotes the export of the E. coli maltose-binding protein Cell 53 1988 273 283
-
(1988)
Cell
, vol.53
, pp. 273-283
-
-
Collier, D.N.1
Bankaitis, V.A.2
Weiss, J.B.3
Bassford, Jr.P.J.4
-
18
-
-
0020398152
-
Evidence for posttranslational translocation of β-lactamase across the bacterial inner membrane
-
D. Koshland, and D. Botstein Evidence for posttranslational translocation of beta-lactamase across the bacterial inner membrane Cell 30 1982 893 902 (Pubitemid 13204672)
-
(1982)
Cell
, vol.30
, Issue.3
, pp. 893-902
-
-
Koshland, D.1
Botstein, D.2
-
19
-
-
0038158265
-
Export of β-lactamase is independent of the signal recognition particle
-
DOI 10.1074/jbc.M300929200
-
D. Beha, S. Deitermann, M. Muller, and H.G. Koch Export of beta-lactamase is independent of the signal recognition particle J. Biol. Chem. 278 2003 22161 22167 (Pubitemid 36792627)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.24
, pp. 22161-22167
-
-
Beha, D.1
Deitermann, S.2
Muller, M.3
Koch, H.-G.4
-
20
-
-
44049095603
-
SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli
-
DOI 10.1016/j.nbt.2008.01.001, PII S1871678408000022
-
H. Thie, T. Schirrmann, M. Paschke, S. Dubel, and M. Hust SRP and Sec pathway leader peptides for antibody phage display and antibody fragment production in E. coli New Biotechnol. 25 2008 49 54 (Pubitemid 351713600)
-
(2008)
New Biotechnology
, vol.25
, Issue.1
, pp. 49-54
-
-
Thie, H.1
Schirrmann, T.2
Paschke, M.3
Dubel, S.4
Hust, M.5
-
21
-
-
33746161571
-
Signal sequences directing cotranslational translocation expand the range of proteins amenable to phage display
-
DOI 10.1038/nbt1218, PII NBT1218
-
D. Steiner, P. Forrer, M.T. Stumpp, and A. Pluckthun Signal sequences directing cotranslational translocation expand the range of proteins amenable to phage display Nat. Biotechnol. 24 2006 823 831 (Pubitemid 44086624)
-
(2006)
Nature Biotechnology
, vol.24
, Issue.7
, pp. 823-831
-
-
Steiner, D.1
Forrer, P.2
Stumpp, M.T.3
Pluckthun, A.4
-
22
-
-
0022495405
-
Kanamycin-resistant vectors that are analogues of plasmids pUC8, pUC9, pEMBL8 and pEMBL9
-
B.G. Spratt, P.J. Hedge, S. te Heesen, A. Edelman, and J.K. Broome-Smith Kanamycin-resistant vectors that are analogues of plasmids pUC8, pUC9, pEMBL8 and pEMBL9 Gene 41 1986 337 342 (Pubitemid 16065451)
-
(1986)
Gene
, vol.41
, Issue.2-3
, pp. 337-342
-
-
Spratt, B.G.1
Hedge, P.J.2
Te Heesen, S.3
-
23
-
-
0030696120
-
The TolB protein interacts with the porins of Escherichia coli
-
A. Rigal, E. Bouveret, R. Lloubes, C. Lazdunski, and H. Benedetti The TolB protein interacts with the porins of Escherichia coli J. Bacteriol. 179 1997 7274 7279 (Pubitemid 27509963)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.23
, pp. 7274-7279
-
-
Rigal, A.1
Bouveret, E.2
Lloubes, R.3
Lazdunski, C.4
Benedetti, H.5
-
24
-
-
0028906903
-
Resistance of Neisseria gonorrhoeae to antimicrobial hydrophobic agents is modulated by the mtrRCDE efflux system
-
K.E. Hagman, W. Pan, B.G. Spratt, J.T. Balthazar, R.C. Judd, and W.M. Shafer Resistance of Neisseria gonorrhoeae to antimicrobial hydrophobic agents is modulated by the mtrRCDE efflux system Microbiology 141 Pt 3 1995 611 622
-
(1995)
Microbiology
, vol.141
, Issue.PART 3
, pp. 611-622
-
-
Hagman, K.E.1
Pan, W.2
Spratt, B.G.3
Balthazar, J.T.4
Judd, R.C.5
Shafer, W.M.6
-
25
-
-
0021921276
-
Rare codons in E. coli and S. typhimurium signal sequences
-
DOI 10.1016/0014-5793(85)81048-6
-
D.M. Burns, and I.R. Beacham Rare codons in E. coli and S. typhimurium signal sequences FEBS Lett. 189 1985 318 324 (Pubitemid 15230836)
-
(1985)
FEBS Letters
, vol.189
, Issue.2
, pp. 318-324
-
-
Burns, D.M.1
Beacham, I.R.2
-
26
-
-
0023650543
-
The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications
-
P.M. Sharp, and W.H. Li The codon Adaptation Index-a measure of directional synonymous codon usage bias, and its potential applications Nucleic Acids Res. 15 1987 1281 1295
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 1281-1295
-
-
Sharp, P.M.1
Li, W.H.2
-
27
-
-
0242298579
-
The effective number of codons for individual amino acids: Some codons are more optimal than others
-
DOI 10.1016/S0378-1119(03)00829-1
-
A. Fuglsang The effective number of codons for individual amino acids: some codons are more optimal than others Gene 320 2003 185 190 (Pubitemid 37352768)
-
(2003)
Gene
, vol.320
, Issue.1-2
, pp. 185-190
-
-
Fuglsang, A.1
-
28
-
-
0030444320
-
Proteases and their targets in Escherichia coli
-
DOI 10.1146/annurev.genet.30.1.465
-
S. Gottesman Proteases and their targets in Escherichia coli Annu. Rev. Genet. 30 1996 465 506 (Pubitemid 27014475)
-
(1996)
Annual Review of Genetics
, vol.30
, pp. 465-506
-
-
Gottesman, S.1
-
29
-
-
0030936847
-
Protein quality control: Triage by chaperones and proteases
-
S. Gottesman, S. Wickner, and M.R. Maurizi Protein quality control: triage by chaperones and proteases Genes Dev. 11 1997 815 823 (Pubitemid 27175289)
-
(1997)
Genes and Development
, vol.11
, Issue.7
, pp. 815-823
-
-
Gottesman, S.1
Wickner, S.2
Maurizi, M.R.3
-
30
-
-
0032774018
-
The Tol proteins of Escherichia coli and their involvement in the uptake of biomolecules and outer membrane stability
-
DOI 10.1016/S0378-1097(99)00293-1, PII S0378109799002931
-
J.C. Lazzaroni, P. Germon, M.C. Ray, and A. Vianney The Tol proteins of Escherichia coli and their involvement in the uptake of biomolecules and outer membrane stability FEMS Microbiol. Lett. 177 1999 191 197 (Pubitemid 29352212)
-
(1999)
FEMS Microbiology Letters
, vol.177
, Issue.2
, pp. 191-197
-
-
Lazzaroni, J.C.1
Germon, P.2
Ray, M.-C.3
Vianney, A.4
-
31
-
-
0034995184
-
The structural basis of protein targeting and translocation in bacteria
-
DOI 10.1038/88549
-
A.J. Driessen, E.H. Manting, and C. van der Does The structural basis of protein targeting and translocation in bacteria Nat. Struct. Biol. 8 2001 492 498 (Pubitemid 32525006)
-
(2001)
Nature Structural Biology
, vol.8
, Issue.6
, pp. 492-498
-
-
Driessen, A.J.M.1
Manting, E.H.2
Van Der Does, C.3
-
32
-
-
0037068441
-
L23 protein functions as a chaperone docking site on the ribosome
-
DOI 10.1038/nature01047
-
G. Kramer, T. Rauch, W. Rist, S. Vorderwulbecke, H. Patzelt, A. Schulze-Specking, N. Ban, E. Deuerling, and B. Bukau L23 protein functions as a chaperone docking site on the ribosome Nature 419 2002 171 174 (Pubitemid 35025445)
-
(2002)
Nature
, vol.419
, Issue.6903
, pp. 171-174
-
-
Kramer, G.1
Rauch, T.2
Rist, W.3
Vorderwulbecke, S.4
Palzelt, H.5
Schulze-Specking, A.6
Ban, N.7
Deuerling, E.8
Bukau, B.9
-
33
-
-
0038360877
-
Interplay of signal recognition particle and trigger factor at L23 near the nascent chain exit site on the Escherichia coli ribosome
-
DOI 10.1083/jcb.200302130
-
R.S. Ullers, E.N. Houben, A. Raine, C.M. ten Hagen-Jongman, M. Ehrenberg, J. Brunner, B. Oudega, N. Harms, and J. Luirink Interplay of signal recognition particle and trigger factor at L23 near the nascent chain exit site on the Escherichia coli ribosome J. Cell Biol. 161 2003 679 684 (Pubitemid 36648750)
-
(2003)
Journal of Cell Biology
, vol.161
, Issue.4
, pp. 679-684
-
-
Ullers, R.S.1
Houben, E.N.G.2
Raine, A.3
Ten Hagen-Jongman, C.M.4
Ehrenberg, M.5
Brunner, J.6
Oudega, B.7
Harms, N.8
Luirink, J.9
-
34
-
-
0034602846
-
Discrimination between SRP- and SecA/SecB-dependent substrates involves selective recognition of nascent chains by SRP and trigger factor
-
K. Beck, L.F. Wu, J. Brunner, and M. Muller Discrimination between SRP- and SecA/SecB-dependent substrates involves selective recognition of nascent chains by SRP and trigger factor EMBO J. 19 2000 134 143 (Pubitemid 30009233)
-
(2000)
EMBO Journal
, vol.19
, Issue.1
, pp. 134-143
-
-
Beck, K.1
Wu, L.-F.2
Brunner, J.3
Muller, M.4
-
35
-
-
0030988143
-
The E. coli SRP: Preferences of a targeting factor
-
DOI 10.1016/S0014-5793(97)00402-X, PII S001457939700402X
-
J.W. De Gier, Q.A. Valent, G. Von Heijne, and J. Luirink The E. coli SRP: preferences of a targeting factor FEBS Lett. 408 1997 1 4 (Pubitemid 27216474)
-
(1997)
FEBS Letters
, vol.408
, Issue.1
, pp. 1-4
-
-
De Gier, J.-W.L.1
Valent, Q.A.2
Von Heijne, G.3
Luirink, J.4
-
36
-
-
0030805752
-
Nascent membrane and presecretory proteins synthesized in Escherichia coli associate with signal recognition particle and trigger factor
-
Q.A. Valent, J.W. de Gier, G. von Heijne, D.A. Kendall, C.M. ten Hagen-Jongman, B. Oudega, and J. Luirink Nascent membrane and presecretory proteins synthesized in Escherichia coli associate with signal recognition particle and trigger factor Mol. Microbiol. 25 1997 53 64 (Pubitemid 27316121)
-
(1997)
Molecular Microbiology
, vol.25
, Issue.1
, pp. 53-64
-
-
Valent, Q.A.1
De Gier, J.-W.L.2
Von Heijne, G.3
Kendall, D.A.4
Ten Hagen-Jongman, C.M.5
Oudega, B.6
Luirink, J.7
-
38
-
-
1542358892
-
Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins
-
DOI 10.1016/S0092-8674(04)00169-2, PII S0092867404001692
-
C.A. Woolhead, P.J. McCormick, and A.E. Johnson Nascent membrane and secretory proteins differ in FRET-detected folding far inside the ribosome and in their exposure to ribosomal proteins Cell 116 2004 725 736 (Pubitemid 38326730)
-
(2004)
Cell
, vol.116
, Issue.5
, pp. 725-736
-
-
Woolhead, C.A.1
McCormick, P.J.2
Johnson, A.E.3
-
39
-
-
1842766175
-
Three-dimensional structures of translating ribosomes by Cryo-EM
-
DOI 10.1016/S1097-2765(04)00163-7, PII S1097276504001637
-
R.J. Gilbert, P. Fucini, S. Connell, S.D. Fuller, K.H. Nierhaus, C.V. Robinson, C.M. Dobson, and D.I. Stuart Three-dimensional structures of translating ribosomes by Cryo-EM Mol. Cell 14 2004 57 66 (Pubitemid 38469909)
-
(2004)
Molecular Cell
, vol.14
, Issue.1
, pp. 57-66
-
-
Gilbert, R.J.C.1
Fucini, P.2
Connell, S.3
Fuller, S.D.4
Nierhaus, K.H.5
Robinson, C.V.6
Dobson, C.M.7
Stuart, D.I.8
-
40
-
-
67549115599
-
Exploring the interactions between signal sequences and E. coli SRP by two distinct and complementary crosslinking methods
-
E.M. Clerico, A. Szymanska, and L.M. Gierasch Exploring the interactions between signal sequences and E. coli SRP by two distinct and complementary crosslinking methods Biopolymers 92 2009 201 211
-
(2009)
Biopolymers
, vol.92
, pp. 201-211
-
-
Clerico, E.M.1
Szymanska, A.2
Gierasch, L.M.3
-
41
-
-
33751325296
-
Following the signal sequence from ribosomal tunnel exit to signal recognition particle
-
DOI 10.1038/nature05326, PII NATURE05326
-
M. Halic, M. Blau, T. Becker, T. Mielke, M.R. Pool, K. Wild, I. Sinning, and R. Beckmann Following the signal sequence from ribosomal tunnel exit to signal recognition particle Nature 444 2006 507 511 (Pubitemid 44809070)
-
(2006)
Nature
, vol.444
, Issue.7118
, pp. 507-511
-
-
Halic, M.1
Blau, M.2
Becker, T.3
Mielke, T.4
Pool, M.R.5
Wild, K.6
Sinning, I.7
Beckmann, R.8
-
42
-
-
0035078316
-
Physiological basis for conservation of the signal recognition particle targeting pathway in Escherichia coli
-
DOI 10.1128/JB.183.7.2187-2197.2001
-
H.D. Bernstein, and J.B. Hyndman Physiological basis for conservation of the signal recognition particle targeting pathway in Escherichia coli J. Bacteriol. 183 2001 2187 2197 (Pubitemid 32240386)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.7
, pp. 2187-2197
-
-
Bernstein, H.D.1
Hyndman, J.B.2
-
43
-
-
0014137931
-
Genetics and physiology of colicin-tolerant mutants of Escherichia coli
-
R. Nagel de Zwaig, and S.E. Luria Genetics and physiology of colicin-tolerant mutants of Escherichia coli J. Bacteriol. 94 1967 1112 1123
-
(1967)
J. Bacteriol.
, vol.94
, pp. 1112-1123
-
-
Nagel De Zwaig, R.1
Luria, S.E.2
|