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Volumn 6, Issue 8, 2011, Pages

Importance of suitable reference gene selection for quantitative real-time PCR: Special reference to mouse myocardial infarction studies

Author keywords

[No Author keywords available]

Indexed keywords

BETA 2 MICROGLOBULIN; BETA ACTIN; BRAIN NATRIURETIC PEPTIDE; CYCLOPHILIN A; DNA DIRECTED DNA POLYMERASE ALPHA; ELONGATION FACTOR 1ALPHA; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE; RIBOSOME PROTEIN; RIBOSOME PROTEIN L13A; TATA BINDING PROTEIN; TUMOR PROTEIN; UNCLASSIFIED DRUG; VASCULAR CELL ADHESION MOLECULE 1; RPL13A PROTEIN, MOUSE; TRANSLATIONALLY CONTROLLED TUMOR PROTEIN, P23; TUMOR MARKER;

EID: 80051763697     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0023793     Document Type: Article
Times cited : (69)

References (21)
  • 2
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, et al. (2002) Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol 3: RESEARCH0034.
    • (2002) Genome Biol , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5
  • 4
    • 0034694128 scopus 로고    scopus 로고
    • Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR
    • Schmittgen TD, Zakrajsek BA, (2000) Effect of experimental treatment on housekeeping gene expression: validation by real-time, quantitative RT-PCR. J Biochem Biophys Methods 46: 69-81.
    • (2000) J Biochem Biophys Methods , vol.46 , pp. 69-81
    • Schmittgen, T.D.1    Zakrajsek, B.A.2
  • 5
    • 34147185270 scopus 로고    scopus 로고
    • Expression of mRNA encoding G protein-coupled receptors involved in congestive heart failure - a quantitative RT-PCR study and the question of normalisation
    • Brattelid T, Tveit K, Birkeland JA, Sjaastad I, Qvigstad E, et al. (2007) Expression of mRNA encoding G protein-coupled receptors involved in congestive heart failure- a quantitative RT-PCR study and the question of normalisation. Basic Res Cardiol 102: 198-208.
    • (2007) Basic Res Cardiol , vol.102 , pp. 198-208
    • Brattelid, T.1    Tveit, K.2    Birkeland, J.A.3    Sjaastad, I.4    Qvigstad, E.5
  • 7
    • 77952247117 scopus 로고    scopus 로고
    • Reference gene alternatives to Gapdh in rodent and human heart failure gene expression studies
    • Brattelid T, Winer LH, Levy FO, Liestol K, Sejersted OM, et al. (2008) Reference gene alternatives to Gapdh in rodent and human heart failure gene expression studies. BMC Mol Biol 11: 22.
    • (2008) BMC Mol Biol , vol.11 , pp. 22
    • Brattelid, T.1    Winer, L.H.2    Levy, F.O.3    Liestol, K.4    Sejersted, O.M.5
  • 8
    • 38949117904 scopus 로고    scopus 로고
    • Identifying the most suitable endogenous control for determining gene expression in hearts from organ donors
    • Perez S, Royo LJ, Astudillo A, Escudero D, Alvarez F, et al. (2007) Identifying the most suitable endogenous control for determining gene expression in hearts from organ donors. BMC Mol Biol 8: 114.
    • (2007) BMC Mol Biol , vol.8 , pp. 114
    • Perez, S.1    Royo, L.J.2    Astudillo, A.3    Escudero, D.4    Alvarez, F.5
  • 9
    • 27644482283 scopus 로고    scopus 로고
    • Comprehensive algorithm for quantitative real-time polymerase chain reaction
    • Zhao S, Fernald RD, (2005) Comprehensive algorithm for quantitative real-time polymerase chain reaction. J Comput Biol 12: 1047-1064.
    • (2005) J Comput Biol , vol.12 , pp. 1047-1064
    • Zhao, S.1    Fernald, R.D.2
  • 10
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations
    • Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP, (2004) Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnol Lett 26: 509-515.
    • (2004) Biotechnol Lett , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 11
    • 0003726271 scopus 로고    scopus 로고
    • Java Applets for Power and Sample Size [Computer software]
    • Retrieved May 25th 2011, from
    • Lenth R, Java Applets for Power and Sample Size [Computer software]. Retrieved May 25th 2011, fromhttp://www.stat.uiowa.edu/~rlenth/Power.
    • Lenth, R.1
  • 12
    • 64149097786 scopus 로고    scopus 로고
    • The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments
    • Bustin SA, Benes V, Garson JA, Hellemans J, Huggett J, et al. (2009) The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin Chem 55: 611-622.
    • (2009) Clin Chem , vol.55 , pp. 611-622
    • Bustin, S.A.1    Benes, V.2    Garson, J.A.3    Hellemans, J.4    Huggett, J.5
  • 13
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y, (1995) Controlling the false discovery rate: a practical and powerful approach to multiple testing. J R Statist Soc B 57: 289-300.
    • (1995) J R Statist Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 14
    • 13744259846 scopus 로고    scopus 로고
    • N-terminal pro-B-type natriuretic peptide and long-term mortality in stable coronary heart disease
    • Kragelund C, Gronning B, Kober L, Hildebrandt P, Steffensen R, (2005) N-terminal pro-B-type natriuretic peptide and long-term mortality in stable coronary heart disease. N Engl J Med 352: 666-675.
    • (2005) N Engl J Med , vol.352 , pp. 666-675
    • Kragelund, C.1    Gronning, B.2    Kober, L.3    Hildebrandt, P.4    Steffensen, R.5
  • 15
    • 36549033197 scopus 로고    scopus 로고
    • The healing myocardium sequentially mobilizes two monocyte subsets with divergent and complementary functions
    • Nahrendorf M, Swirski FK, Aikawa E, Stangenberg L, Wurdinger T, el al, (2007) The healing myocardium sequentially mobilizes two monocyte subsets with divergent and complementary functions. J Exp Med 204: 3037-3047.
    • (2007) J Exp Med , vol.204 , pp. 3037-3047
    • Nahrendorf, M.1    Swirski, F.K.2    Aikawa, E.3    Stangenberg, L.4    Wurdinger, T.5
  • 16
    • 77649235913 scopus 로고    scopus 로고
    • How to do successful gene expression analysis using real-time PCR
    • Derveaux S, Vandesompele J, Hellemans J, (2010) How to do successful gene expression analysis using real-time PCR. Methods 50: 227-230.
    • (2010) Methods , vol.50 , pp. 227-230
    • Derveaux, S.1    Vandesompele, J.2    Hellemans, J.3
  • 17
    • 34247377425 scopus 로고    scopus 로고
    • GAPDH, a novel regulator of the pro-apoptotic mitochondrial membrane permeabilization
    • Tarze A, Deniaud A, Le Bras M, Maillier E, Molle D, et al. (2007) GAPDH, a novel regulator of the pro-apoptotic mitochondrial membrane permeabilization. Oncogene 26: 2606-2620.
    • (2007) Oncogene , vol.26 , pp. 2606-2620
    • Tarze, A.1    Deniaud, A.2    Le Bras, M.3    Maillier, E.4    Molle, D.5
  • 18
    • 0024462319 scopus 로고
    • cDNA sequence coding for a translationally controlled human tumor protein
    • Gross B, Gaestel M, Bohm H, Bielka H, (1989) cDNA sequence coding for a translationally controlled human tumor protein. Nucleic Acids Res 17: 8367.
    • (1989) Nucleic Acids Res , vol.17 , pp. 8367
    • Gross, B.1    Gaestel, M.2    Bohm, H.3    Bielka, H.4
  • 19
    • 0033851026 scopus 로고    scopus 로고
    • Expression of the gene and processed pseudogenes encoding the human and rabbit translationally controlled tumour protein (TCTP)
    • Thiele H, Berger M, Skalweit A, Thiele BJ, (2000) Expression of the gene and processed pseudogenes encoding the human and rabbit translationally controlled tumour protein (TCTP). Eur J Biochem 267: 5473-5481.
    • (2000) Eur J Biochem , vol.267 , pp. 5473-5481
    • Thiele, H.1    Berger, M.2    Skalweit, A.3    Thiele, B.J.4
  • 20
    • 76349088054 scopus 로고    scopus 로고
    • Roles of the translationally controlled tumour protein (TCTP) and the double-stranded RNA-dependent protein kinase, PKR, in cellular stress responses
    • Bommer UA, Heng C, Perrin A, Dash P, Lobov S, et al. (2010) Roles of the translationally controlled tumour protein (TCTP) and the double-stranded RNA-dependent protein kinase, PKR, in cellular stress responses. Oncogene 29: 763-773.
    • (2010) Oncogene , vol.29 , pp. 763-773
    • Bommer, U.A.1    Heng, C.2    Perrin, A.3    Dash, P.4    Lobov, S.5
  • 21
    • 77955543004 scopus 로고    scopus 로고
    • Determination of reference genes for circadian studies in different tissues and mouse strains
    • Kosir R, Acimovic J, Golicnik M, Perse M, Majdic G, et al. (2010) Determination of reference genes for circadian studies in different tissues and mouse strains. BMC Mol Biol 11: 60.
    • (2010) BMC Mol Biol , vol.11 , pp. 60
    • Kosir, R.1    Acimovic, J.2    Golicnik, M.3    Perse, M.4    Majdic, G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.