메뉴 건너뛰기




Volumn 92, Issue 9, 2011, Pages 2047-2059

Co-existence of multiple strains of two novel porcine bocaviruses in the same pig, a previously undescribed phenomenon in members of the family Parvoviridae, and evidence for inter-and intra-host genetic diversity and recombination

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL TISSUE; ARTICLE; BOCAVIRUS; CHROMOSOME BREAKAGE; CONTROLLED STUDY; FECES ANALYSIS; GENE CLUSTER; GENE SEQUENCE; GENETIC ANALYSIS; GENETIC RECOMBINATION; GENETIC VARIABILITY; GENOTYPE; HONG KONG; HOST; LYMPH NODE; MOLECULAR CLONING; NASOPHARYNX; NONHUMAN; NOSE SMEAR; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PARVOVIRUS; PHYLOGENY; POLYMERASE CHAIN REACTION; PORCINE BOCAVIRUS 3; PORCINE BOCAVIRUS 4; PRIORITY JOURNAL; SERUM; SINGLE NUCLEOTIDE POLYMORPHISM; SLAUGHTERHOUSE; SWINE; UNINDEXED SEQUENCE; VIRUS DETECTION; VIRUS GENE; VIRUS STRAIN;

EID: 80051740535     PISSN: 00221317     EISSN: 14652099     Source Type: Journal    
DOI: 10.1099/vir.0.033688-0     Document Type: Article
Times cited : (60)

References (44)
  • 3
  • 4
    • 33746484675 scopus 로고    scopus 로고
    • High genetic diversity of the VP2 gene of a canine parvovirus strain detected in a domestic cat
    • Battilani, M., Scagliarini, A., Ciulli, S., Morganti, L. & Prosperi, S. (2006). High genetic diversity of the VP2 gene of a canine parvovirus strain detected in a domestic cat. Virology 352, 22-26.
    • (2006) Virology , vol.352 , pp. 22-26
    • Battilani, M.1    Scagliarini, A.2    Ciulli, S.3    Morganti, L.4    Prosperi, S.5
  • 5
    • 0001548103 scopus 로고
    • Recovery and characterization of a minute virus of canines
    • Binn, L. N., Lazar, E. C., Eddy, G. A. & Kajima, M. (1970). Recovery and characterization of a minute virus of canines. Infect Immun 1, 503-508.
    • (1970) Infect Immun , vol.1 , pp. 503-508
    • Binn, L.N.1    Lazar, E.C.2    Eddy, G.A.3    Kajima, M.4
  • 6
    • 70350241322 scopus 로고    scopus 로고
    • Detection of a novel porcine boca-like virus in the background of porcine circovirus type 2 induced postweaning multisystemic wasting syndrome
    • Blomström, A. L., Belák, S., Fossum, C., McKillen, J., Allan, G., Wallgren, P. & Berg, M. (2009). Detection of a novel porcine boca-like virus in the background of porcine circovirus type 2 induced postweaning multisystemic wasting syndrome. Virus Res 146, 125-129.
    • (2009) Virus Res , vol.146 , pp. 125-129
    • Blomström, A.L.1    Belák, S.2    Fossum, C.3    McKillen, J.4    Allan, G.5    Wallgren, P.6    Berg, M.7
  • 8
    • 77951976293 scopus 로고    scopus 로고
    • Identification and molecular cloning of a novel porcine parvovirus
    • Cheung, A. K., Wu, G., Wang, D., Bayles, D. O., Lager, K. M. & Vincent, A. L. (2010). Identification and molecular cloning of a novel porcine parvovirus. Arch Virol 155, 801-806.
    • (2010) Arch Virol , vol.155 , pp. 801-806
    • Cheung, A.K.1    Wu, G.2    Wang, D.3    Bayles, D.O.4    Lager, K.M.5    Vincent, A.L.6
  • 9
    • 40849097775 scopus 로고    scopus 로고
    • Rates of evolutionary change in viruses: Patterns and determinants
    • Duffy, S., Shackelton, L. A. & Holmes, E. C. (2008). Rates of evolutionary change in viruses: patterns and determinants. Nat Rev Genet 9, 267-276.
    • (2008) Nat Rev Genet , vol.9 , pp. 267-276
    • Duffy, S.1    Shackelton, L.A.2    Holmes, E.C.3
  • 11
    • 0242578620 scopus 로고    scopus 로고
    • A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
    • Guindon, S. & Gascuel, O. (2003). A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52, 696-704.
    • (2003) Syst Biol , vol.52 , pp. 696-704
    • Guindon, S.1    Gascuel, O.2
  • 13
    • 55549097120 scopus 로고    scopus 로고
    • Within-host genetic diversity of endemic and emerging parvoviruses of dogs and cats
    • Hoelzer, K., Shackelton, L. A., Holmes, E. C. & Parrish, C. R. (2008). Within-host genetic diversity of endemic and emerging parvoviruses of dogs and cats. J Virol 82, 11096-11105.
    • (2008) J Virol , vol.82 , pp. 11096-11105
    • Hoelzer, K.1    Shackelton, L.A.2    Holmes, E.C.3    Parrish, C.R.4
  • 14
    • 0022765922 scopus 로고
    • Nonhomologous recombination in the parvovirus chromosome: Role for a CTATTTCT motif
    • Hogan, A. & Faust, E. A. (1986). Nonhomologous recombination in the parvovirus chromosome: role for a CTATTTCT motif. Mol Cell Biol 6, 3005-3009.
    • (1986) Mol Cell Biol , vol.6 , pp. 3005-3009
    • Hogan, A.1    Faust, E.A.2
  • 19
    • 77951916579 scopus 로고    scopus 로고
    • Human bocaviruses are highly diverse, dispersed, recombination prone, and prevalent in enteric infections
    • other authors
    • Kapoor, A., Simmonds, P., Slikas, E., Li, L., Bodhidatta, L., Sethabutr, O., Triki, H., Bahri, O., Oderinde, B. S. & other authors (2010b). Human bocaviruses are highly diverse, dispersed, recombination prone, and prevalent in enteric infections. J Infect Dis 201, 1633-1643.
    • (2010) J Infect Dis , vol.201 , pp. 1633-1643
    • Kapoor, A.1    Simmonds, P.2    Slikas, E.3    Li, L.4    Bodhidatta, L.5    Sethabutr, O.6    Triki, H.7    Bahri, O.8    Oderinde, B.S.9
  • 20
    • 33645816587 scopus 로고    scopus 로고
    • Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
    • Keane, T. M., Creevey, C. J., Pentony, M. M., Naughton, T. J. & Mclnerney, J. O. (2006). Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol Biol 6, 29.
    • (2006) BMC Evol Biol , vol.6 , pp. 29
    • Keane, T.M.1    Creevey, C.J.2    Pentony, M.M.3    Naughton, T.J.4    McLnerney, J.O.5
  • 22
    • 34848861643 scopus 로고    scopus 로고
    • Complete genome sequence of bat coronavirus HKU2 from Chinese horseshoe bats revealed a much smaller spike gene with a different evolutionary lineage from the rest of the genome
    • Lau, S. K. P., Woo, P. C. Y., Li, K. S.M., Huang, Y., Wang, M., Lam, C. S. F., Xu, H., Guo, R., Chan, K.-H. & (2007a). Complete genome sequence of bat coronavirus HKU2 from Chinese horseshoe bats revealed a much smaller spike gene with a different evolutionary lineage from the rest of the genome. Virology 367, 428-439.
    • (2007) Virology , vol.367 , pp. 428-439
    • Lau, S.K.P.1    Woo, P.C.Y.2    Li, K.S.M.3    Huang, Y.4    Wang, M.5    Lam, C.S.F.6    Xu, H.7    Guo, R.8    Chan, K.-H.9
  • 23
    • 35348815516 scopus 로고    scopus 로고
    • Clinical and molecular epidemiology of human bocavirus in respiratory and fecal samples from children in Hong Kong
    • other authors
    • Lau, S. K. P., Yip, C. C. Y., Que, T.-L., Lee, R. A., Au-Yeung, R. K., Zhou, B. P., So, L.-Y., Lau, Y.-L., Chan, K.-H. & other authors (2007b). Clinical and molecular epidemiology of human bocavirus in respiratory and fecal samples from children in Hong Kong. J Infect Dis 196, 986-993.
    • (2007) J Infect Dis , vol.196 , pp. 986-993
    • Lau, S.K.P.1    Yip, C.C.Y.2    Que, T.-L.3    Lee, R.A.4    Au-Yeung, R.K.5    Zhou, B.P.6    So, L.-Y.7    Lau, Y.-L.8    Chan, K.-H.9
  • 24
    • 50549098375 scopus 로고    scopus 로고
    • Identification of novel porcine and bovine parvoviruses closely related to human parvovirus 4
    • other authors
    • Lau, S. K., Woo, P. C., Tse, H., Fu, C. T., Au, W.-K., Chen, X.-C., Tsoi, H.-W., Tsang, T. H., Chan, J. S. & other authors (2008). Identification of novel porcine and bovine parvoviruses closely related to human parvovirus 4. J Gen Virol 89, 1840-1848.
    • (2008) J Gen Virol , vol.89 , pp. 1840-1848
    • Lau, S.K.1    Woo, P.C.2    Tse, H.3    Fu, C.T.4    Au, W.-K.5    Chen, X.-C.6    Tsoi, H.-W.7    Tsang, T.H.8    Chan, J.S.9
  • 25
    • 77649122707 scopus 로고    scopus 로고
    • Ecoepidemiology and complete genome comparison of different strains of severe acute respiratory syndrome-related Rhinolophus bat coronavirus in China reveal bats as a reservoir for acute, self-limiting infection that allows recombination events
    • other authors
    • Lau, S. K., Li, K. S., Huang, Y., Shek, C.-T., Tse, H., Wang, M., Choi, G. K., Xu, H., Lam, C. S. & other authors (2010a). Ecoepidemiology and complete genome comparison of different strains of severe acute respiratory syndrome-related Rhinolophus bat coronavirus in China reveal bats as a reservoir for acute, self-limiting infection that allows recombination events. J Virol 84, 2808-2819.
    • (2010) J Virol , vol.84 , pp. 2808-2819
    • Lau, S.K.1    Li, K.S.2    Huang, Y.3    Shek, C.-T.4    Tse, H.5    Wang, M.6    Choi, G.K.7    Xu, H.8    Lam, C.S.9
  • 26
    • 77957962420 scopus 로고    scopus 로고
    • Coexistence of different genotypes in the same bat and serological characterization of Rousettus bat coronavirus HKU9 belonging to a novel Betacoronavirus subgroup
    • other authors
    • Lau, S. K., Poon, R.W., Wong, B. H., Wang, M., Huang, Y., Xu, H., Guo, R., Li, K. S., Gao, K. & other authors (2010b). Coexistence of different genotypes in the same bat and serological characterization of Rousettus bat coronavirus HKU9 belonging to a novel Betacoronavirus subgroup. J Virol 84, 11385-11394.
    • (2010) J Virol , vol.84 , pp. 11385-11394
    • Lau, S.K.1    Poon, R.W.2    Wong, B.H.3    Wang, M.4    Huang, Y.5    Xu, H.6    Guo, R.7    Li, K.S.8    Gao, K.9
  • 28
    • 0032889281 scopus 로고    scopus 로고
    • Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
    • Lole, K. S., Bollinger, R. C., Paranjape, R. S., Gadkari, D., Kulkarni, S. S., Novak, N. G., Ingersoll, R., Sheppard, H. W. & Ray, S. C. (1999). Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J Virol 73, 152-160.
    • (1999) J Virol , vol.73 , pp. 152-160
    • Lole, K.S.1    Bollinger, R.C.2    Paranjape, R.S.3    Gadkari, D.4    Kulkarni, S.S.5    Novak, N.G.6    Ingersoll, R.7    Sheppard, H.W.8    Ray, S.C.9
  • 30
    • 0036398428 scopus 로고    scopus 로고
    • Identification and characterization of a second novel human erythrovirus variant, A6
    • Nguyen, Q. T., Wong, S., Heegaard, E. D. & Brown, K. E. (2002). Identification and characterization of a second novel human erythrovirus variant, A6. Virology 301, 374-380.
    • (2002) Virology , vol.301 , pp. 374-380
    • Nguyen, Q.T.1    Wong, S.2    Heegaard, E.D.3    Brown, K.E.4
  • 32
    • 12244297403 scopus 로고    scopus 로고
    • High rate of viral evolution associated with the emergence of carnivore parvovirus
    • Shackelton, L. A., Parrish, C. R., Truyen, U. & Holmes, E. C. (2005). High rate of viral evolution associated with the emergence of carnivore parvovirus. Proc Natl Acad Sci U S A 102, 379-384.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 379-384
    • Shackelton, L.A.1    Parrish, C.R.2    Truyen, U.3    Holmes, E.C.4
  • 33
    • 0022470376 scopus 로고
    • Nucleotide sequence and genome organization of human parvovirus B19 isolated from the serum of a child during aplastic crisis
    • Shade, R. O., Blundell, M. C., Cotmore, S. F., Tattersall, P. & Astell, C. R. (1986). Nucleotide sequence and genome organization of human parvovirus B19 isolated from the serum of a child during aplastic crisis. J Virol 58, 921-936.
    • (1986) J Virol , vol.58 , pp. 921-936
    • Shade, R.O.1    Blundell, M.C.2    Cotmore, S.F.3    Tattersall, P.4    Astell, C.R.5
  • 34
    • 77956834049 scopus 로고    scopus 로고
    • Widespread infection with homologues of human parvoviruses B19, PARV4, and human bocavirus of chimpanzees and gorillas in the wild
    • other authors
    • Sharp, C. P., LeBreton, M., Kantola, K., Nana, A., Diffo, J. D., Djoko, C. F., Tamoufe, U., Kiyang, J. A., Babila, T. G. & other authors (2010). Widespread infection with homologues of human parvoviruses B19, PARV4, and human bocavirus of chimpanzees and gorillas in the wild. J Virol 84, 10289-10296.
    • (2010) J Virol , vol.84 , pp. 10289-10296
    • Sharp, C.P.1    Lebreton, M.2    Kantola, K.3    Nana, A.4    Diffo, J.D.5    Djoko, C.F.6    Tamoufe, U.7    Kiyang, J.A.8    Babila, T.G.9
  • 37
    • 0034044315 scopus 로고    scopus 로고
    • Investigation of porcine parvovirus among persons with hemophilia receiving Hyate:C porcine factor VIII concentrate
    • other authors
    • Soucie, J. M., Erdman, D. D., Evatt, B. L., Anderson, L. J., Török, T. J., El-Jamil, M., Barnhart, E., Tepper, M., Burrill, H. N. & other authors (2000). Investigation of porcine parvovirus among persons with hemophilia receiving Hyate:C porcine factor VIII concentrate. Transfusion 40, 708-711.
    • (2000) Transfusion , vol.40 , pp. 708-711
    • Soucie, J.M.1    Erdman, D.D.2    Evatt, B.L.3    Anderson, L.J.4    Török, T.J.5    El-Jamil, M.6    Barnhart, E.7    Tepper, M.8    Burrill, H.N.9
  • 38
    • 0013926908 scopus 로고
    • Experimental infection of calves with hemadsorbing enteric (HADEN) virus
    • Spahn, G. J., Mohanty, S. B. & Hetrick, F. M. (1966). Experimental infection of calves with hemadsorbing enteric (HADEN) virus. Cornell Vet 56, 377-386.
    • (1966) Cornell Vet , vol.56 , pp. 377-386
    • Spahn, G.J.1    Mohanty, S.B.2    Hetrick, F.M.3
  • 40
    • 64049112433 scopus 로고    scopus 로고
    • Molecular characterization of infectious clones of the minute virus of canines reveals unique features of bocaviruses
    • Sun, Y., Chen, A. Y., Cheng, F., Guan, W., Johnson, F. B. & Qiu, J. (2009). Molecular characterization of infectious clones of the minute virus of canines reveals unique features of bocaviruses. J Virol 83, 3956-3967.
    • (2009) J Virol , vol.83 , pp. 3956-3967
    • Sun, Y.1    Chen, A.Y.2    Cheng, F.3    Guan, W.4    Johnson, F.B.5    Qiu, J.6
  • 41
    • 19944427959 scopus 로고    scopus 로고
    • Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia
    • other authors
    • Woo, P. C., Lau, S. K., Chu, C.-M., Chan, K.-H., Tsoi, H.-W., Huang, Y., Wong, B. H., Poon, R. W., Cai, J. J. & other authors (2005). Characterization and complete genome sequence of a novel coronavirus, coronavirus HKU1, from patients with pneumonia. J Virol 79, 884-895.
    • (2005) J Virol , vol.79 , pp. 884-895
    • Woo, P.C.1    Lau, S.K.2    Chu, C.-M.3    Chan, K.-H.4    Tsoi, H.-W.5    Huang, Y.6    Wong, B.H.7    Poon, R.W.8    Cai, J.J.9
  • 43
    • 79955756837 scopus 로고    scopus 로고
    • Complete coding sequences and phylogenetic analysis of porcine bocavirus
    • Zeng, S., Wang, D., Fang, L., Ma, J., Song, T., Zhang, R., Chen, H. & Xiao, S. (2011). Complete coding sequences and phylogenetic analysis of porcine bocavirus. J Gen Virol 92, 784-788.
    • (2011) J Gen Virol , vol.92 , pp. 784-788
    • Zeng, S.1    Wang, D.2    Fang, L.3    Ma, J.4    Song, T.5    Zhang, R.6    Chen, H.7    Xiao, S.8
  • 44
    • 77955174952 scopus 로고    scopus 로고
    • High prevalence of a novel porcine bocavirus in weanling piglets with respiratory tract symptoms in China
    • Zhai, S., Yue, C., Wei, Z., Long, J., Ran, D., Lin, T., Deng, Y., Huang, L., Sun, L. & other authors (2010). High prevalence of a novel porcine bocavirus in weanling piglets with respiratory tract symptoms in China. Arch Virol 155, 1313-1317.
    • (2010) Arch Virol , vol.155 , pp. 1313-1317
    • Zhai, S.1    Yue, C.2    Wei, Z.3    Long, J.4    Ran, D.5    Lin, T.6    Deng, Y.7    Huang, L.8    Sun, L.9


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.