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Volumn 21, Issue 8, 2011, Pages 1306-1312

Origin of amphibian and avian chromosomes by fission, fusion, and retention of ancestral chromosomes

Author keywords

[No Author keywords available]

Indexed keywords

AMBYSTOMA MEXICANUM; AMPHIBIA; ANIMAL GENETICS; ARTICLE; CHICKEN; CHROMOSOME; CHROMOSOME NUMBER; CHROMOSOME REARRANGEMENT; CHROMOSOME SIZE; CHROMOSOME STRUCTURE; FOWL; GENE MAPPING; GENE ORDER; GENETIC CONSERVATION; GENETIC LINKAGE; GENETIC MODEL; GENETIC VARIABILITY; GENOME ANALYSIS; MOLECULAR EVOLUTION; NONHUMAN; ORTHOLOGY; PRIORITY JOURNAL; SALAMANDER; SEQUENCE ALIGNMENT; SYNTENY; VERTEBRATE; XENOPUS; XENOPUS TROPICALIS;

EID: 80051566443     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.116491.110     Document Type: Article
Times cited : (73)

References (45)
  • 2
    • 0028025398 scopus 로고
    • The chromosomes of the living coelacanth and their remarkable similarity to those of one of the most ancient frogs
    • Bogart JP, Balon EK, Bruton MN. 1994. The chromosomes of the living coelacanth and their remarkable similarity to those of one of the most ancient frogs. J Hered 85: 322-325. (Pubitemid 24278099)
    • (1994) Journal of Heredity , vol.85 , Issue.4 , pp. 322-325
    • Bogart, J.P.1    Balon, E.K.2    Bruton, M.N.3
  • 3
    • 0036045092 scopus 로고    scopus 로고
    • Origin of avian microchromosomes
    • Burt DW. 2002. Origin of avian microchromosomes. Cytogenet Genome Res 96: 97-112.
    • (2002) Cytogenet Genome Res , vol.96 , pp. 97-112
    • Burt, D.W.1
  • 5
    • 21644456726 scopus 로고    scopus 로고
    • High chromosome conservation detected by comparative chromosome painting in chicken, pigeon and passerine birds
    • DOI 10.1023/B:CHRO.0000045779.50641.00
    • Derjusheva S, Kurganova A, Habermann F, Gaginskaya E. 2004. High chromosome conservation detected by comparative chromosome painting in chicken, pigeon and passerine birds. Chromosome Res 12: 715-723. (Pubitemid 41217415)
    • (2004) Chromosome Research , vol.12 , Issue.7 , pp. 715-723
    • Derjusheva, S.1    Kurganova, A.2    Habermann, F.3    Gaginskaya, E.4
  • 8
    • 34248231212 scopus 로고    scopus 로고
    • The evolution of the avian genome as revealed by comparative molecular cytogenetics
    • DOI 10.1159/000103166
    • Griffin DK, Robertson LB, Tempest HG, Skinner BM. 2007. The evolution of the avian genome as revealed by comparative molecular cytogenetics. Cytogenet Genome Res 117: 64-77. (Pubitemid 47202666)
    • (2007) Cytogenetic and Genome Research , vol.117 , Issue.1-4 , pp. 64-77
    • Griffin, D.K.1    Robertson, L.B.W.2    Tempest, H.G.3    Skinner, B.M.4
  • 10
    • 75449083009 scopus 로고    scopus 로고
    • Cross-species chromosome painting corroborates microchromosome fusion during karyotype evolution of birds
    • Hansmann T, Nanda I, Volobouev V, Yang F, Schartl M, Haaf T, Schmid M. 2009. Cross-species chromosome painting corroborates microchromosome fusion during karyotype evolution of birds. Cytogenet Genome Res 126: 281-304.
    • (2009) Cytogenet Genome Res , vol.126 , pp. 281-304
    • Hansmann, T.1    Nanda, I.2    Volobouev, V.3    Yang, F.4    Schartl, M.5    Haaf, T.6    Schmid, M.7
  • 12
    • 1942422549 scopus 로고    scopus 로고
    • Precision of molecular time estimates
    • DOI 10.1016/j.tig.2004.03.004, PII S0168952504000721
    • Hedges SB, Kumar S. 2004. Precision of molecular time estimates. Trends Genet 20: 242-247. (Pubitemid 38510437)
    • (2004) Trends in Genetics , vol.20 , Issue.5 , pp. 242-247
    • Hedges, S.B.1    Kumar, S.2
  • 14
    • 56449091358 scopus 로고    scopus 로고
    • Genome size reduction in the chicken involved massive loss of ancestral protein coding genes
    • Hughes AL, Friedman R. 2008. Genome size reduction in the chicken involved massive loss of ancestral protein coding genes. Mol Biol Evol 25: 2681-2688.
    • (2008) Mol Biol e , vol.25 , pp. 2681-2688
    • Hughes, A.L.1    Friedman, R.2
  • 15
    • 18544366082 scopus 로고    scopus 로고
    • Chromosomal polymorphism and comparative painting analysis in the zebra finch
    • DOI 10.1007/s10577-005-6602-x
    • Itoh Y, Arnold AP. 2005. Chromosomal polymorphism and comparative painting analysis in the zebra finch. Chromosome Res 13: 47-56. (Pubitemid 40655461)
    • (2005) Chromosome Research , vol.13 , Issue.1 , pp. 47-56
    • Itoh, Y.1    Arnold, A.P.2
  • 16
    • 34547622854 scopus 로고    scopus 로고
    • Different origins of bird and reptile sex chromosomes inferred from comparative mapping of chicken Z-linked genes
    • DOI 10.1159/000103169
    • Kawai A, Nishida-Umehara C, Ishijima J, Tsuda Y, Ota H, Matsuda Y. 2007. Different origins of bird and reptile sex chromosomes inferred from comparative mapping of chicken Z-linked genes. Cytogenet Genome Res 117: 92-102. (Pubitemid 47202669)
    • (2007) Cytogenetic and Genome Research , vol.117 , Issue.1-4 , pp. 92-102
    • Kawai, A.1    Nishida-Umehara, C.2    Ishijima, J.3    Tsuda, Y.4    Ota, H.5    Matsuda, Y.6
  • 17
    • 33744789487 scopus 로고    scopus 로고
    • Integrated maps in quail (Coturnix japonica) confirm the high degree of synteny conservation with chicken (Gallus gallus) despite 35 million years of divergence
    • doi: 10.1186/1471-2164-7-101
    • Kayang BB, Fillon V, Inoue-Murayama M, Miwa M, Leroux S, Fève K, Monvoisin JL, Pitel F, Vignoles M, Mouilhayrat C, et al. 2006. Integrated maps in quail (Coturnix japonica) confirm the high degree of synteny conservation with chicken (Gallus gallus) despite 35 million years of divergence. BMC Genomics 7: 101. doi: 10.1186/1471-2164-7-101.
    • (2006) BMC Genomics , vol.7 , pp. 101
    • Kayang, B.B.1    Fillon, V.2    Inoue-Murayama, M.3    Miwa, M.4    Leroux, S.5    Fève, K.6    Monvoisin, J.L.7    Pitel, F.8    Vignoles, M.9    Mouilhayrat, C.10
  • 19
    • 0000732266 scopus 로고
    • The estimation of map distances from recombination values
    • Kosambi D. 1944. The estimation of map distances from recombination values. Ann Eugen 12: 172-175.
    • (1944) Ann Eugen , vol.12 , pp. 172-175
    • Kosambi, D.1
  • 20
    • 66049138940 scopus 로고    scopus 로고
    • Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories
    • Larkin DM, Pape G, Donthu R, Auvil L, Welge M, Lewin HA. 2009. Breakpoint regions and homologous synteny blocks in chromosomes have different evolutionary histories. Genome Res 19: 770-777.
    • (2009) Genome Res , vol.19 , pp. 770-777
    • Larkin, D.M.1    Pape, G.2    Donthu, R.3    Auvil, L.4    Welge, M.5    Lewin, H.A.6
  • 22
    • 0001420063 scopus 로고
    • Amphibia
    • ed. AB Chiarelli, E Campanna, Academic, London, UK
    • Morescalchi A. 1973. Amphibia. In Cytotaxonomy and vertebrate evolution (ed. AB Chiarelli, E Campanna), pp. 233-348. Academic, London, UK.
    • (1973) Cytotaxonomy and Vertebrate Evolution , pp. 233-348
    • Morescalchi, A.1
  • 23
    • 34548420992 scopus 로고    scopus 로고
    • Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates
    • DOI 10.1101/gr.6316407
    • Nakatani Y, Takeda H, Kohara Y, Morishita S. 2007. Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates. Genome Res 17: 1254-1265. (Pubitemid 47360900)
    • (2007) Genome Research , vol.17 , Issue.9 , pp. 1254-1265
    • Nakatani, Y.1    Takeda, H.2    Kohara, Y.3    Morishita, S.4
  • 24
    • 78651098928 scopus 로고    scopus 로고
    • Synteny conservation of chicken macrochromosomes 1-10 in different avian lineages revealed by cross-species chromosome painting
    • Nanda I, Benisch P, Fetting D, Haaf T, Schmid M. 2011. Synteny conservation of chicken macrochromosomes 1-10 in different avian lineages revealed by cross-species chromosome painting. Cytogenet Genome Res 132: 165-181.
    • (2011) Cytogenet Genome Res , vol.132 , pp. 165-181
    • Nanda, I.1    Benisch, P.2    Fetting, D.3    Haaf, T.4    Schmid, M.5
  • 25
    • 62749186214 scopus 로고    scopus 로고
    • Avian comparative genomics: Reciprocal chromosome painting between domestic chicken (Gallus gallus) and the stone curlew (Burhinus oedicnemus, Charadriiformes) - An atypical species with low diploid number
    • Nie W, O'Brien PC, Ng BL, Fu B, Volobouev V, Carter NP, Ferguson-Smith MA, Yang F. 2009. Avian comparative genomics: reciprocal chromosome painting between domestic chicken (Gallus gallus) and the stone curlew (Burhinus oedicnemus, Charadriiformes) - an atypical species with low diploid number. Chromosome Res 17: 99-113.
    • (2009) Chromosome Res , vol.17 , pp. 99-113
    • Nie, W.1    O'Brien, P.C.2    Ng, B.L.3    Fu, B.4    Volobouev, V.5    Carter, N.P.6    Ferguson-Smith, M.A.7    Yang, F.8
  • 26
    • 77957785172 scopus 로고    scopus 로고
    • Gene expression in chicken reveals correlation with structural genomic features and conserved patterns of transcription in the terrestrial vertebrates
    • doi: 10.1371/journal.pone.001990
    • Nie H, Crooijmans RP, Lammers A, van Schothorst EM, Keijer J, Neerincx PB, Leunissen JA, Megens HJ, Groenen MA. 2010. Gene expression in chicken reveals correlation with structural genomic features and conserved patterns of transcription in the terrestrial vertebrates. PLoS ONE 5: e11990. doi: 10.1371/journal.pone.001990.
    • (2010) PLoS ONE , vol.5
    • Nie, H.1    Crooijmans, R.P.2    Lammers, A.3    Van Schothorst, E.M.4    Keijer, J.5    Neerincx, P.B.6    Leunissen, J.A.7    Megens, H.J.8    Groenen, M.A.9
  • 27
    • 53549102748 scopus 로고    scopus 로고
    • Trends in the evolution of reptilian chromosomes
    • Olmo E. 2008. Trends in the evolution of reptilian chromosomes. Integr Comp Biol 48: 486-493.
    • (2008) Integr Comp Biol , vol.48 , pp. 486-493
    • Olmo, E.1
  • 31
    • 1942454202 scopus 로고    scopus 로고
    • Molecular timescales and the fossil record: A paleontological perspective
    • DOI 10.1016/j.tig.2004.03.007, PII S0168952504000757
    • Riesz RR, Muller J. 2004. Molecular timescales and the fossil record: a paleontological perspective. Trends Genet 20: 237-241. (Pubitemid 38510436)
    • (2004) Trends in Genetics , vol.20 , Issue.5 , pp. 237-241
    • Reisz, R.R.1    Muller, J.2
  • 33
    • 39749152198 scopus 로고    scopus 로고
    • Evolutionary cytogenetics in salamanders
    • DOI 10.1007/s10577-007-1205-3
    • Sessions SK. 2008. Evolutionary cytogenetics in salamanders. Chromosome Res 16: 183-201. (Pubitemid 351294781)
    • (2008) Chromosome Research , vol.16 , Issue.1 , pp. 183-201
    • Sessions, S.K.1
  • 34
    • 0343320348 scopus 로고    scopus 로고
    • Comparative painting reveals strong chromosome homology over 80 million years of bird evolution
    • DOI 10.1023/A:1009278914829
    • Shetty S, Griffin DK, Graves JA. 1999. Comparative painting reveals strong chromosome homology over 80 million years of bird evolution. Chromosome Res 7: 289-295. (Pubitemid 29353704)
    • (1999) Chromosome Research , vol.7 , Issue.4 , pp. 289-295
    • Shetty, S.1    Griffin, D.K.2    Graves, J.A.M.3
  • 35
    • 33748612443 scopus 로고    scopus 로고
    • Gene order data from a model amphibian: New perspectives on vertebrate genome structure and evolution
    • doi: 10.1186/1471-2164-7-219
    • Smith JJ, Voss SR. 2006. Gene order data from a model amphibian: New perspectives on vertebrate genome structure and evolution. BMC Genomics 7: 219. doi: 10.1186/1471-2164-7-219.
    • (2006) BMC Genomics , vol.7 , pp. 219
    • Smith, J.J.1    Voss, S.R.2
  • 36
    • 35048896501 scopus 로고    scopus 로고
    • Chromosomal regions from bird and mammalian sex chromosomes were linked ancestrally
    • Smith JJ, Voss SR. 2007. Chromosomal regions from bird and mammalian sex chromosomes were linked ancestrally. Genetics 177: 607-613.
    • (2007) Genetics , vol.177 , pp. 607-613
    • Smith, J.J.1    Voss, S.R.2
  • 38
    • 32544432974 scopus 로고    scopus 로고
    • A comprehensive expressed sequence tag linkage map for tiger salamander and Mexican axolotl: Enabling gene mapping and comparative genomics in Ambystoma
    • DOI 10.1534/genetics.105.046433
    • Smith JJ, Kump K, Walker JA, Parichy DM, Voss SR. 2005b. A genetic linkage map for tiger salamander and mexican axolotl (Ambystoma): Enabling gene mapping, comparative genomics, and PCR marker development in Ambystoma. Genetics 171: 1161-1171. (Pubitemid 43234848)
    • (2005) Genetics , vol.171 , Issue.3 , pp. 1161-1171
    • Smith, J.J.1    Kump, D.K.2    Walker, J.A.3    Parichy, D.M.4    Voss, S.R.5
  • 39
    • 51849143838 scopus 로고    scopus 로고
    • A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution
    • Stapley J, Birkhead TR, Burke T, Slate J. 2008. A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution. Genetics 179: 651-667.
    • (2008) Genetics , vol.179 , pp. 651-667
    • Stapley, J.1    Birkhead, T.R.2    Burke, T.3    Slate, J.4
  • 40
    • 0031914878 scopus 로고    scopus 로고
    • Genome size and GC-percent in vertebrates as determined by flow cytometry: The triangular relationship
    • DOI 10.1002/(SICI)1097-0320(19980201)31:2<100::AID-CYTO5>3.0.CO;2-Q
    • Vinogradov AE. 1998. Genome size and GC-percent in vertebrates as determined by flow cytometry: the triangular relationship. Cytometry 31: 100-109. (Pubitemid 28092058)
    • (1998) Cytometry , vol.31 , Issue.2 , pp. 100-109
    • Vinogradov, A.E.1
  • 41
  • 42
    • 32544447253 scopus 로고    scopus 로고
    • Voorips RE. 2002. MapChart 2.1. http://www.plant.wageningenur.nl/ products/mapping/MapChart.
    • (2002) MapChart 2.1
    • Voorips, R.E.1
  • 44
    • 0034976804 scopus 로고    scopus 로고
    • Conserved vertebrate chromosome segments in the large salamander genome
    • Voss SR, Smith JJ, Gardiner DM, Parichy DM. 2001. Conserved vertebrate chromosomal segments in the large salamander genome. Genetics 158: 735-746. (Pubitemid 32552312)
    • (2001) Genetics , vol.158 , Issue.2 , pp. 735-746
    • Voss, S.R.1    Smith, J.J.2    Gardiner, D.M.3    Parichy, D.M.4
  • 45
    • 69249244262 scopus 로고    scopus 로고
    • Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes
    • Zhang P, Wake DB. 2009. Higher-level salamander relationships and divergence dates inferred from complete mitochondrial genomes. Mol Phylogenet Evol 53: 492-508.
    • (2009) Mol Phylogenet e , vol.53 , pp. 492-508
    • Zhang, P.1    Wake, D.B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.