Characterization of an intact phycoerythrin and its cleaved 14 kDa functional subunit from marine cyanobacterium Phormidium sp. A27DM

Process Biochemistry

Volumn 46, Issue 9, 2011, Pages 1793-1799

  Parmar, Asha ^a   Singh, Niraj Kumar ^a   Kaushal, Avani ^a   Madamwar, Datta ^a  

^a SARDAR PATEL UNIVERSITY   (India)

Author keywords

Cyanobacteria; Intact phycoerythrin; Truncated phycoerythrin

Indexed keywords

CYANOBACTERIA; GLACIAL ACETIC ACID; GROWTH CONDITIONS; IN-VITRO; IN-VIVO; INTACT PHYCOERYTHRIN; MARINE CYANOBACTERIUM; NITROGEN DEPLETION; PHORMIDIUM; PROTEASE INHIBITOR; STRESS CONDITION; TRUNCATED PHYCOERYTHRIN;

ACETIC ACID;

EXPERIMENTS;

CYANOBACTERIA; PHORMIDIUM SP.;

EID: 80051546834     PISSN: 13595113     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.procbio.2011.06.006     Document Type: Article

References (39)

1. K. Kahn, D. Mazel, J. Houmard, N. Tandeau De Marsac, and M.R. Schaefer A role for cpeYZ in cyanobacterial phycoerythrin biosynthesis J Bacteriol 179 1997 998 1006 (Pubitemid 27076557)
2. J.C. Gingrich, R.C. Williams, and A.N. Glazer Rod substructure in cyanobacterial phycobilisomes: Phycoerythrin assembly in Synechocystis 6701 phycobilisomes J Cell Biol 95 1982 170 178 (Pubitemid 13197087)
3. K.E. Wilk, S.J. Harrop, L. Jankova, D. Edler, G. Keenan, and F. Sharples Evolution of a light-harvesting protein by addition of new subunits and rearrangement of conserved elements: crystal structure of a cryptophytes phycoerythrin at 1.63- resolution Proc Natl Acad Sci 96 1999 8901 8906 (Pubitemid 29374680)
4. J.C. Thomas, and C. Passaquet Characterization of a phycoerythrin without α-subunits from a unicellular red alga J Biol Chem 274 1999 2472 2482
5. A.V. Klotz, A.N. Glazer, J.E. Bishop, J.O. Nagy, and H. Rapoport Phycobiliprotein-bilin linkage diversity. II. Structural studies on A and D-ring-linked phycoerythrobilins J Biol Chem 261 1986 6797 6805 (Pubitemid 17219445)
6. C. Bernard, J.C. Thomas, D. Mazel, A. Mousseau, A.M. Castets, and N. Tandeau de Marsac Characterization of genes encoding phycoerythrin in the red alga Rhodella violacea: evidence for a splitting of the rpeB gene by an intron Proc Natl Acad Sci 89 1992 9564 9568
7. S.M. Wilbanks, R. Lorimier, and A.N. Glazer Phycoerythrins of marine unicellular cyanobacteria. III. Sequence of a class II phycoerythrin J Biol Chem 266 1991 9535 9539 (Pubitemid 21906689)
8. L.K. Anderson, and A.R. Grossman Structure and light-regulated expression of phycoerythrin genes in wild-type and phycobilisome assembly mutants of Synechocystis sp. strain PCC 6701 J Bacteriol 172 1990 1297 1305 (Pubitemid 20085950)
9. D. Mazel, G. Guglielmi, J. Houmard, W. Sidler, D.A. Brayant, and N. Tandeau de Marsac Green light induces transcription of the phycoerythrin operon in the cyanobacterium Calothrix 7601 Nucleic Acids Res 14 1986 8279 8290
10. S. Gottesman, and M.R. Maurizi Regulation by proteolysis: energy-dependent proteases and their targets Microbial Rev 56 1992 592 621
11. C.P. Hill, N.L. Johnston, and R.E. Cohen Crystal structure of a ubiquitin-dependent degradation substrate: a three-disulphide form of lysozyme Proc Natl Acad Sci 90 1993 4136 4140 (Pubitemid 23134181)
12. J.L. Collier, and A.R. Grossman A small polypeptide triggers complete degradation of light-harvesting phycobiliproteins in nutrient-deprived cyanobacteria EMBO J 13 1994 1039 1047 (Pubitemid 24074710)
13. M.M. Allen, and A.J. Smith Nitrogen chlorosis in blue-green algae Arch Microbiol 690 1969 111 120
14. H. Reithman, G. Bullerjahn, K.J. Reddy, and L.A. Sherman Regulation of cyanobacterial pigment-protein composition and organization by environmental factors Photosynth Res 18 1988 133 161
15. R.D. Simon Inclusion bodies in the cyanobacteria: cyanophycin, polyphosphate, polyhedral bodies P. Fay, C. Van Baalen, The cyanobacteria 1987 Elsevier Science Publishers BV Amsterdam 199 225
16. M.M. Allen Cyanobacterial cell inclusions Annu Rev Microbiol 38 1984 1 25
17. M. Wyman, R.P.F. Gregory, and N.G. Carr Novel role of phycoerythrin in a marine cyanobacterium, Synechococcus strain DC2 Science 230 1985 818 820 (Pubitemid 16193973)
18. R.W. Schoenleber, D.J. Lundell, A.N. Glazer, and H. Rapoport Bilin attachment sites in the α and β subunits in B-phycoerythrin. Structural studies on the singly linked phycoerythrobilins J Biol Chem 259 1984 5485 5489 (Pubitemid 14145002)
19. L.J. Ong, and A.N. Glazer Phycoerythrins of marine unicellular cyanobacteria. I. Bilin types and locations and energy transfer pathways in Synechococcus sp. phycoerythrins J Biol Chem 266 1991 9515 9527 (Pubitemid 21906687)
20. R.V. Swanson, L.J. Ong, S.M. Wilbanks, and A.N. Glazer Phycoerythrins of marine unicellular cyanobacteria. II. Characterization of phycobiliproteins with unusually high phycourobilin content J Biol Chem 266 1991 9528 9534 (Pubitemid 21906688)
21. N.A. Federspiel, and L. Scott Characterization of a light-regulated gene encoding a new phycoerythrin-associated linker protein from the cyanobacterium Fremyella diplosiphon J Bacteriol 174 1992 5994 5998
22. S.M. Wilbanks, and A.N. Glazer Rod structure of a phycoerythrin II containing phycobilisome. I. Organization and sequence of the gene cluster encoding the major phycobiliprotein rod components in the genome of marine Synechococcus sp. WH8020 J Biol Chem 268 1993 1226 1235 (Pubitemid 23019765)
23. R. MacColl, L.E. Eisele, E.C. Williams, and S.S. Bowser The discovery of a novel R-phycoerythrin from and Antartic Red Alga J Biol Chem 271 1996 17157 17160 (Pubitemid 26244267)
24. R. Rossano, N. Ungaro, A. D'Ambrosio, G.M. Liuzzi, and P. Riccio Extracting and purifying R-phycoerythrin from Mediterranean red algae Corallina elongate Ellis & Solander J Biotechnol 101 2003 289 293 (Pubitemid 36263206)
25. V. Shah, N. Garg, and D. Madamwar Record of the marine cyanobacterium from the rocky shores of Bet-Dwarka and Okha, India Acta Bot Mal 26 2001 188 193
26. J.B. Waterbury, and R.Y. Stanier Isolation and growth of cyanobacteria from marine and hypersaline environments M.P. Starr, H. Stolp, H.G. Trüper, A. Balows, H.G. Schlegel, The prokaryotes 1981 Springer-Verlag Berlin 221 223
27. A. Parmar, N.K. Singh, A. Kaushal, S. Sonawala, and D. Madamwar Purification, characterization and comparison of phycoerythrins from three different cyanobacterial cultures Bioresour Technol 102 2011 1795 1802
28. A. Parmar, N.K. Singh, and D. Madamwar Allophycocyanin from a local isolate Geitlerinema sp. A28DM (Cyanobacteria): a simple and efficient purification process J Phycol 46 2010 285 289
29. N.K. Singh, A. Parmar, and D. Madamwar Optimization of medium components for increased production of C-phycocyanin from Phormidium ceylanicum and its purification by single step process Bioresour Technol 100 2009 1663 1669 (Pubitemid 50312124)
30. D. Garfin One dimensional gel electrophoresis M.P. Deutscher, J.N. Abelson, M.I. Simon, Guide to protein purification 1990 Academic Press California 425 441
31. H.O. Lowry, N.J. Rosenbrough, A.L. Farr, and R.J. Randell Protein measurement with the Folin phenol reagent J Biol Chem 193 1951 265 275
32. A. Bennet, and L. Bogorad Complementary chromatic adaptation in filamentous blue-green alga J Cell Biol 58 1973 419 435
33. A. Pastore, and A.M. Lesk Comparison of the structures of globins and phycocyanins: evidence for evolutionary relationships Proteins Struc Funct Genet 8 1990 133 155 (Pubitemid 20262538)
34. B. Soni, M.I. Hassan, A. Parmar, A.S. Ethayathulla, P.R. Kumar, and N.K. Singh Structure of a novel 14 kDa fragment of α-subunit of phycoerythrin from the starving cyanobacterium Phormidium tenue J Struct Biol 17 2010 247 255
35. M. Rigbi, J. Rosinski, H.W. Siegelman, and J.C. Sutherland Cyanobacterial phycobilisomes: selective dissociation monitored by fluorescence and circular dichroism Proc Natl Acad Sci 77 1980 1961 1965 (Pubitemid 10089584)
36. R. De Lorimier, D.A. Bryant, R.D. Porter, W. Lui, E. Jay, and S.E. Stevens Genes for α and ß phycocyanin Proc Natl Acad Sci 81 1984 7946 7950
37. A.R. Grossman, M.R. Schaefer, G.G. Chiang, and J.L. Collier The phycobilisome, a light-harvesting complex responsive to environmental conditions Microbial Rev 57 1993 725 749 (Pubitemid 23262516)
38. N.B. Wood, and R. Haselkorn Control of phycobiliproteins proteolysis and heterocyst differentiation in Anabaena J Bacteriol 141 1980 1375 1385 (Pubitemid 10076167)
39. A. Hershko Ubiquitin mediated protein degradation J Biol Chem 263 1988 15237 15740