Double repression of soluble starch synthase genes SSIIa and SSIIIa in rice (Oryza sativa L.) uncovers interactive effects on the physicochemical properties of starch

Genome

Volumn 54, Issue 6, 2011, Pages 448-459

  Zhang, Guoyu ^a   Cheng, Zhijun ^a   Zhang, Xin ^a   Guo, Xiuping ^a   Su, Ning ^a   Jiang, Ling ^b   Mao, Long ^a   Wan, Jianmin ^a,b  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b NANJING AGRICULTURAL UNIVERSITY   (China)

Author keywords

gene family; protein interaction; RNA interference (RNAi); soluble starch synthase

Indexed keywords

AMYLOPECTIN; AMYLOSE; STARCH; STARCH SYNTHASE; VEGETABLE PROTEIN;

ARTICLE; BIOSYNTHESIS; CHEMISTRY; DOWN REGULATION; ENZYME REPRESSION; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; METABOLISM; MOLECULAR CLONING; MUTATION; PHENOTYPE; PHYLOGENY; PLANT GENE; PLANT SEED; POLYMERIZATION; RICE; RNA INTERFERENCE; TRANSGENIC PLANT; TWO HYBRID SYSTEM;

AMYLOPECTIN; AMYLOSE; CLONING, MOLECULAR; DOWN-REGULATION; ENZYME REPRESSION; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; MUTATION; ORYZA SATIVA; PHENOTYPE; PHYLOGENY; PLANT PROTEINS; PLANTS, GENETICALLY MODIFIED; POLYMERIZATION; RNA INTERFERENCE; SEEDS; STARCH; STARCH SYNTHASE; TWO-HYBRID SYSTEM TECHNIQUES;

ORYZA SATIVA;

EID: 79961184948     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g11-010     Document Type: Article

References (41)

1. Ball S.G. Morell M.K. 2003. From bacterial glycogen to starch: understanding the biogenesis of the plant starch granule. Annu. Rev. Plant Biol. 54 (1): 207-233. 10.1146/annurev.arplant.54.031902.134927 14502990 (Pubitemid 37399993)
2. Bradford M.M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72 (1-2): 248-254. 10.1016/0003-2697(76)90527-3 942051
3. Buléon A. Colonna P. Planchot V. Ball S. 1998. Starch granules: structure and biosynthesis. Int. J. Biol. Macromol. 23 (2): 85-112. 10.1016/S0141-8130(98)00040-3 9730163 (Pubitemid 28396136)
4. Cao H. Imparl-Radosevich J. Guan H. Keeling P.L. James M.G. Myers A.M. 1999. Identification of the soluble starch synthase activities of maize endosperm. Plant Physiol. 120 (1): 205-216. 10.1104/pp.120.1.205 10318698
5. Craig J. Lloyd J.R. Tomlinson K. Barber L. Edwards A. Wang T.L. et al. 1998. Mutations in the gene encoding starch synthase II profoundly alter amylopectin structure in pea embryos. Plant Cell, 10 (3): 413-426. 10.1105/tpc.10.3.413 9501114 (Pubitemid 28553955)
6. Dai S. Zheng P. Marmey P. Zhang S. Tian W. Chen S. et al. 2001. Comparative analysis of transgenic rice plants obtained by Agrobacterium- mediated transformation and particle bombardment. Mol. Breed. 7 (1): 25-33. 10.1023/A:1009687511633 (Pubitemid 32228591)
7. Dian W. Jiang H. Wu P. 2005. Evolution and expression analysis of starch synthase III and IV in rice. J. Exp. Bot. 56 (412): 623-632. 10.1093/jxb/eri065 15642712 (Pubitemid 40295149)
8. Edwards A. Fulton D.C. Hylton C.M. Jobling S.A. Gidley M. Rossner U. et al. 1999. A combined reduction in activity of starch synthases II and III of potato has novel effects on the starch of tubers. Plant J. 17 (3): 251-261. 10.1046/j.1365-313X.1999.00371.x (Pubitemid 29100950)
9. Fujita N. Hasegawa H. Taira T. 2001. The isolation and characterization of a waxy mutant of diploid wheat (Triticum monococcum L.). Plant Sci. 160 (4): 595-602. 10.1016/S0168-9452(00)00408-8 11448734 (Pubitemid 32233368)
10. Fujita N. Kubo A. Suh D.S. Wong K.S. Jane J.L. Ozawa K. et al. 2003. Antisense inhibition of isoamylase alters the structure of amylopectin and the physicochemical properties of starch in rice endosperm. Plant Cell Physiol. 44 (6): 607-618. 10.1093/pcp/pcg079 12826626 (Pubitemid 36821195)
11. Fujita N. Yoshida M. Asakura N. Ohdan T. Miyao A. Hirochika H. Nakamura Y. 2006. Function and characterization of starch synthase I using mutants in rice. Plant Physiol. 140 (3): 1070-1084. 10.1104/pp.105.071845 16443699 (Pubitemid 43956258)
12. Fujita N. Yoshida M. Kondo T. Saito K. Utsumi Y. Tokunaga T. et al. 2007. Characterization of SSIIIa-deficient mutants of rice: the function of SSIIIa and pleiotropic effects by SSIIIa deficiency in the rice endosperm. Plant Physiol. 144 (4): 2009-2023. 10.1104/pp.107.102533 17586688 (Pubitemid 47258115)
13. Hennen-Bierwagen T.A. Liu F. Marsh R.S. Kim S. Gan Q. Tetlow I.J. et al. 2008. Starch biosynthetic enzymes from developing maize endosperm associate in multisubunit complexes. Plant Physiol. 146 (4): 1892-1908. 10.1104/pp.108.116285 18281416 (Pubitemid 352844056)
14. Hennen-Bierwagen T.A. Lin Q. Grimaud F. Planchot V. Keeling P.L. James M.G. Myers A.M. 2009. Proteins from multiple metabolic pathways associate with starch biosynthetic enzymes in high molecular weight complexes: a model for regulation of carbon allocation in maize amyloplasts. Plant Physiol. 149 (3): 1541-1559. 10.1104/pp.109.135293 19168640
15. Hirose T. Terao T. 2004. A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.). Planta, 220 (1): 9-16. 10.1007/s00425-004-1314-6 15232694 (Pubitemid 40032994)
16. James M.G. Denyer K. Myers A.M. 2003. Starch synthesis in the cereal endosperm. Curr. Opin. Plant Biol. 6 (3): 215-222. 10.1016/S1369-5266(03)00042-6 12753970 (Pubitemid 36704506)
17. Jane J. Chen Y.Y. Lee L.F. McPherson A.E. Wong K.S. Radosavljevic M. Kasemsuwan T. 1999. Effects of amylopectin branch chain length and amylose content on the gelatinization and pasting properties of starch. Cereal Chem. 76 (5): 629-637. 10.1094/CCHEM.1999.76.5.629 (Pubitemid 29466483)
18. Keeling P.L. Myers A.M. 2010. Biochemistry and genetics of starch synthesis. Annu. Rev. Food Sci. Technol. 1 (1): 271-303. 10.1146/annurev.food. 102308.124214
19. Konik-Rose C. Thistleton J. Chanvrier H. Tan I. Halley P. Gidley M. et al. 2007. Effects of starch synthase IIa gene dosage on grain, protein and starch in endosperm of wheat. Theor. Appl. Genet. 115 (8): 1053-1065. 10.1007/s00122-007-0631-0 17721773 (Pubitemid 350043561)
20. Lloyd J.R. Landschutze V. Kossmann J. 1999. Simultaneous antisense inhibition of two starch-synthase isoforms in potato tubers leads to accumulation of grossly modified amylopectin. Biochem. J. 338 (2): 515-521. 10.1042/0264-6021:3380515 10024530 (Pubitemid 29121788)
21. Morell M.K. Kosar-Hashemi B. Cmiel M. Samuel M.S. Chandler P. Rahman S. et al. 2003. Barley sex6 mutants lack starch synthase IIa activity and contain a starch with novel properties. Plant J. 34 (2): 173-185. 10.1046/j.1365-313X. 2003.01712.x 12694593 (Pubitemid 36536680)
22. Myers A.M. Morell M.K. James M.G. Ball S.G. 2000. Recent progress toward understanding biosynthesis of the amylopectin crystal. Plant Physiol. 122 (4): 989-998. 10.1104/pp.122.4.989 10759494
23. Nakamura Y. 2002. Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: rice endosperm as a model tissue. Plant Cell Physiol. 43 (7): 718-725. 10.1093/pcp/pcf091 12154134 (Pubitemid 34877886)
24. Nakamura Y. Francisco P.B. Jr. Hosaka Y. Sato A. Sawada T. Kubo A. Fujita N. 2005. Essential amino acids of starch synthase IIa differentiate amylopectin structure and starch quality between japonica and indica rice varieties. Plant Mol. Biol. 58 (2): 213-227. 10.1007/s11103-005-6507-2 16027975 (Pubitemid 41126000)
25. Nishi A. Nakamura Y. Tanaka N. Satoh H. 2001. Biochemical and genetic analysis of the effects of amylose-extender mutation in rice endosperm. Plant Physiol. 127 (2): 459-472. 10.1104/pp.010127 11598221 (Pubitemid 32996749)
26. O'Shea M.G. Morell M.K. 1996. High resolution slab gel electrophoresis of 8-amino-1,3,6-pyrenetrisulfonic acid (APTS) tagged oligosaccharides using a DNA sequencer. Electrophoresis, 17 (4): 681-686. 10.1002/elps.1150170410 8738327 (Pubitemid 26158529)
27. Ohdan T. Francisco P.B. Jr Sawada T. Hirose T. Terao T. Satoh H. Nakamura Y. 2005. Expression profiling of genes involved in starch synthesis in sink and source organs of rice. J. Exp. Bot. 56 (422): 3229-3244. 10.1093/jxb/eri292 16275672 (Pubitemid 41746673)
28. Pawloski L.C. Kandasamy M.K. Meagher R.B. 2006. The late pollen actins are essential for normal male and female development in Arabidopsis. Plant Mol. Biol. 62 (6): 881-896. 10.1007/s11103-006-9063-5 17031513 (Pubitemid 44730325)
29. Ryoo N. Yu C. Park C.S. Baik M.Y. Park I.M. Cho M.H. et al. 2007. Knockout of a starch synthase gene OsSSIIIa / Flo5 causes white-core floury endosperm in rice (Oryza sativa L.). Plant Cell Rep. 26 (7): 1083-1095. 10.1007/s00299-007-0309-8 17297616 (Pubitemid 350092173)
30. Sambrook, J., Fritsch, E.F., and Maniatis, T. 1989. Molecular cloning: a laboratory manual. 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
31. Tetlow I.J. Wait R. Lu Z. Akkasaeng R. Bowsher C.G. Esposito S. et al. 2004. Protein phosphorylation in amyloplasts regulates starch branching enzyme activity and protein-protein interactions. Plant Cell, 16 (3): 694-708. 10.1105/tpc.017400 14973170 (Pubitemid 38335279)
32. Tetlow I.J. Beisel K.G. Cameron S. Makhmoudova A. Liu F. Bresolin N.S. et al. 2008. Analysis of protein complexes in wheat amyloplasts reveals functional interactions among starch biosynthetic enzymes. Plant Physiol. 146 (4): 1878-1891. 10.1104/pp.108.116244 18263778 (Pubitemid 352844055)
33. Tian Z. Qian Q. Liu Q. Yan M. Liu X. Yan C. et al. 2009. Allelic diversities in rice starch biosynthesis lead to a diverse array of rice eating and cooking qualities. Proc. Natl. Acad. Sci. U.S.A. 106 (51): 21760-21765. 10.1073/pnas.0912396106 20018713
34. Tomlinson K. Denyer K. 2003. Starch synthesis in cereal grains. Adv. Bot. Res. 40: 1-61. 10.1016/S0065-2296(05)40001-4 (Pubitemid 137639185)
35. Umemoto T. Yano M. Satoh H. Shomura A. Nakamura Y. 2002. Mapping of a gene responsible for the difference in amylopectin structure between japonica-type and indica-type rice varieties. Theor. Appl. Genet. 104 (1): 1-8. 10.1007/s001220200000 12579422 (Pubitemid 36064853)
36. Umemoto T. Aoki N. Lin H.X. Nakamura Y. Inouchi N. Sato Y. et al. 2004. Natural variation in rice starch synthase IIa affects enzyme and starch properties. Funct. Plant Biol. 31 (7): 671-684. 10.1071/FP04009 (Pubitemid 39147607)
37. Yamakawa H. Hirose T. Kuroda M. Yamaguchi T. 2007. Comprehensive expression profiling of rice grain filling-related genes under high temperature using DNA microarray. Plant Physiol. 144 (1): 258-277. 10.1104/pp.107.098665 17384160 (Pubitemid 46941629)
38. Yamamori M. Fujita S. Hayakawa K. Matsuki J. Yasui T. 2000. Genetic elimination of a starch granule protein, SGP-1, of wheat generates an altered starch with apparent high amylose. Theor. Appl. Genet. 101 (1-2): 21-29. 10.1007/s001220051444 (Pubitemid 30483592)
39. Yan H. Jiang H. Pan X. Li M. Chen Y. Wu G. 2009. The gene encoding starch synthase IIc exists in maize and wheat. Plant Sci. 176 (1): 51-57. 10.1016/j.plantsci.2008.09.003
40. Zeeman S.C. Kossmann J. Smith A.M. 2010. Starch: its metabolism, evolution, and biotechnological modification in plants. Annu. Rev. Plant Biol. 61 (1): 209-234. 10.1146/annurev-arplant-042809-112301 20192737
41. Zhang X. Szydlowski N. Delvalle D. D'Hulst C. James M.G. Myers A.M. 2008. Overlapping functions of the starch synthases SSII and SSIII in amylopectin biosynthesis in Arabidopsis. BMC Plant Biol. 8: 96. 10.1186/1471-2229-8-96 18811962