Metab: An R package for high-throughput analysis of metabolomics data generated by GC-MS

Bioinformatics

Volumn 27, Issue 16, 2011, Pages 2316-2318

  Aggio, Raphael ^a   Villas Bôas, Silas Granato ^a   Ruggiero, Katya ^a,b  

^a UNIVERSITY OF AUCKLAND   (New Zealand)

^b UNIVERSITY OF AUCKLAND   (New Zealand)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; HUMAN; MASS FRAGMENTOGRAPHY; METABOLOMICS; METHODOLOGY;

GAS CHROMATOGRAPHY-MASS SPECTROMETRY; HUMANS; METABOLOMICS; SOFTWARE;

EID: 79961174954     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr379     Document Type: Article

References (5)

1. Dalgaard,P. (2001) The R-Tcl/Tk interface. In Hornik,K. and Leisch,F. (eds) Proceedings of the 2nd International Workshop on Distributed Statistical Computing, March 15-17, 2001. Technische Universität Wien, Vienna, Austria.
2. Dunn,W.B. (2008) Current trends and future requirements for the mass spectrometric investigation of microbial, mammalian and plant metabolomes. Phys. Biol., 5, 11001.
3. Bengtsson,H. (2010) R.utils: various programming utilities. R package version 1.4.3. R Development Core Team (2008) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing. Vienna, Austria.
4. Smart,K.F. et al. (2010) Analytical platform for metabolome analysis of microbial cells using methyl chloroformate derivatization followed by gas chromatography-mass spectrometry. Nat. Protoc., 5, 1709-1729.
5. Smith,C.A. et al. (2006) XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. Anal. Chem., 78, 779-787.