메뉴 건너뛰기




Volumn 77, Issue 3, 2011, Pages 680-689

Postnatal development of the rabbit caecal microbiota composition and activity

Author keywords

CE SSCP; Gut microbiota; Postnatal development; Rabbit; Real time PCR

Indexed keywords

BUTYRIC ACID DERIVATIVE; PROPIONIC ACID DERIVATIVE;

EID: 79961171437     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/j.1574-6941.2011.01148.x     Document Type: Article
Times cited : (80)

References (47)
  • 2
    • 0026677857 scopus 로고
    • Simulation in vitro des fermentations caecales du lapin en fermenteur à flux semi-continu. 1. Rôle du prétraitement du substrat alimentaire
    • Adjiri D, Bouillier Oudot M, Lebas F & Candau M (1992) Simulation in vitro des fermentations caecales du lapin en fermenteur à flux semi-continu. 1. Rôle du prétraitement du substrat alimentaire. Reprod Nutr Dev 32: 351-360.
    • (1992) Reprod Nutr Dev , vol.32 , pp. 351-360
    • Adjiri, D.1    Bouillier Oudot, M.2    Lebas, F.3    Candau, M.4
  • 3
    • 0025099312 scopus 로고
    • Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
    • Amann RI, Krumholz L & Stahl DA (1990) Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J Bacteriol 172: 762-770.
    • (1990) J Bacteriol , vol.172 , pp. 762-770
    • Amann, R.I.1    Krumholz, L.2    Stahl, D.A.3
  • 4
    • 4043089085 scopus 로고
    • Arrêté du 19 avril 1988 fixant les conditions d'attribution de l'autorisation d'expérimenter
    • Anonymous ()
    • Anonymous (1988) Arrêté du 19 avril 1988 fixant les conditions d'attribution de l'autorisation d'expérimenter. J Off Répub Fr 5608-5610.
    • (1988) J Off Répub Fr , pp. 5608-5610
  • 5
    • 0041694212 scopus 로고    scopus 로고
    • Effects of age and dietary fibre level on caecal microbial communities of conventional and specific pathogen-free rabbits
    • Bennegadi N, Fonty G, Millet L, Gidenne T & Licois D (2003) Effects of age and dietary fibre level on caecal microbial communities of conventional and specific pathogen-free rabbits. Microb Ecol Health D 5: 23-32.
    • (2003) Microb Ecol Health D , vol.5 , pp. 23-32
    • Bennegadi, N.1    Fonty, G.2    Millet, L.3    Gidenne, T.4    Licois, D.5
  • 6
    • 0030297089 scopus 로고    scopus 로고
    • The indigenous gastrointestinal microflora
    • Berg D (1996) The indigenous gastrointestinal microflora. Trends Microbiol 4: 430-435.
    • (1996) Trends Microbiol , vol.4 , pp. 430-435
    • Berg, D.1
  • 7
    • 79961172427 scopus 로고    scopus 로고
    • Suivi des ventes de médicaments vétérinaires contenant des antibiotiques en France en 2007. Ministère de l'Agriculture de l'Alimentation de la Pêche et des Affaires Rurales. AFSSA-ANMV, Fougères, France
    • Chevance A & Moulin G (2009) Suivi des ventes de médicaments vétérinaires contenant des antibiotiques en France en 2007. Ministère de l'Agriculture de l'Alimentation de la Pêche et des Affaires Rurales. AFSSA-ANMV, Fougères, France, 38 pp.
    • (2009) , pp. 38
    • Chevance, A.1    Moulin, G.2
  • 8
    • 79961172960 scopus 로고    scopus 로고
    • Impact of an exclusive milk vs. milk and dry feed intake till weaning on intake, growth, and on the caecal biodiversity and fibrolytic activity of the young rabbit
    • (Xiccato G, ed) Fondazione Iniziative Zooprofilattiche e Zootecniche, Brescia, Italy.
    • Combes S, Cauquil L & Gidenne T (2008) Impact of an exclusive milk vs. milk and dry feed intake till weaning on intake, growth, and on the caecal biodiversity and fibrolytic activity of the young rabbit. 9th World Rabbit Congress, Proceedings (Xiccato G, ed), pp. 607-611. Fondazione Iniziative Zooprofilattiche e Zootecniche, Brescia, Italy.
    • (2008) 9th World Rabbit Congress, Proceedings , pp. 607-611
    • Combes, S.1    Cauquil, L.2    Gidenne, T.3
  • 10
    • 0034554845 scopus 로고    scopus 로고
    • Monitoring of activity dynamics of an anaerobic digester bacterial community using 16S rRNA polymerase chain reaction single-strand conformation polymorphism analysis
    • Delbès C, Moletta R & Godon J-J (2000) Monitoring of activity dynamics of an anaerobic digester bacterial community using 16S rRNA polymerase chain reaction single-strand conformation polymorphism analysis. Environ Microbiol 2: 506-515.
    • (2000) Environ Microbiol , vol.2 , pp. 506-515
    • Delbès, C.1    Moletta, R.2    Godon, J.-J.3
  • 11
    • 22144470189 scopus 로고    scopus 로고
    • Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays
    • Fierer N, Jackson JA, Vilgalys R & Jackson RB (2005) Assessment of soil microbial community structure by use of taxon-specific quantitative PCR assays. Appl Environ Microb 71: 4117-4120.
    • (2005) Appl Environ Microb , vol.71 , pp. 4117-4120
    • Fierer, N.1    Jackson, J.A.2    Vilgalys, R.3    Jackson, R.B.4
  • 12
    • 0346047151 scopus 로고    scopus 로고
    • The effects of size of suckled litter on intake behaviour, performance and health status of young and reproducing rabbits
    • Fortun-Lamothe L & Gidenne T (2000) The effects of size of suckled litter on intake behaviour, performance and health status of young and reproducing rabbits. Ann Zootech 49: 517-529.
    • (2000) Ann Zootech , vol.49 , pp. 517-529
    • Fortun-Lamothe, L.1    Gidenne, T.2
  • 15
    • 0011979181 scopus 로고
    • Evolution de la microflore digestive du lapin holoxénique de la naissance au sevrage
    • Gouet P & Fonty G (1973) Evolution de la microflore digestive du lapin holoxénique de la naissance au sevrage. Ann Biol Anim Bioch 13: 733-735.
    • (1973) Ann Biol Anim Bioch , vol.13 , pp. 733-735
    • Gouet, P.1    Fonty, G.2
  • 16
    • 0018420499 scopus 로고
    • Changes in the digestive microflora of holoxenic rabbits from birth until adulthood
    • Gouet P & Fonty G (1979) Changes in the digestive microflora of holoxenic rabbits from birth until adulthood. Ann Biol Anim Bioch 19: 553-566.
    • (1979) Ann Biol Anim Bioch , vol.19 , pp. 553-566
    • Gouet, P.1    Fonty, G.2
  • 17
    • 54249110955 scopus 로고    scopus 로고
    • Development of a real-time PCR method for Firmicutes and Bacteroidetes in faeces and its application to quantify intestinal population of obese and lean pigs
    • Guo X, Xia X, Tang R, Zhou J, Zhao H & Wang K (2008) Development of a real-time PCR method for Firmicutes and Bacteroidetes in faeces and its application to quantify intestinal population of obese and lean pigs. Lett Appl Microbiol 47: 367-373.
    • (2008) Lett Appl Microbiol , vol.47 , pp. 367-373
    • Guo, X.1    Xia, X.2    Tang, R.3    Zhou, J.4    Zhao, H.5    Wang, K.6
  • 20
    • 0041654220 scopus 로고
    • Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis
    • Kruskal JB (1964) Multidimensional scaling by optimizing goodness of fit to a nonmetric hypothesis. Psychometrika 29: 1-27.
    • (1964) Psychometrika , vol.29 , pp. 1-27
    • Kruskal, J.B.1
  • 21
    • 78149368847 scopus 로고    scopus 로고
    • Molecular profiling and identification of methanogenic archaeal species from rabbit caecum
    • Kušar D & Avguštin G (2010) Molecular profiling and identification of methanogenic archaeal species from rabbit caecum. FEMS Microbiol Ecol 74: 623-630.
    • (2010) FEMS Microbiol Ecol , vol.74 , pp. 623-630
    • Kušar, D.1    Avguštin, G.2
  • 22
    • 33745153077 scopus 로고    scopus 로고
    • Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water
    • Layton A, McKay L, Williams D, Garrett V, Gentry R & Sayler G (2006) Development of Bacteroides 16S rRNA gene TaqMan-based real-time PCR assays for estimation of total, human, and bovine fecal pollution in water. Appl Environ Microb 72: 4214-4224.
    • (2006) Appl Environ Microb , vol.72 , pp. 4214-4224
    • Layton, A.1    McKay, L.2    Williams, D.3    Garrett, V.4    Gentry, R.5    Sayler, G.6
  • 23
    • 32944466887 scopus 로고    scopus 로고
    • Ecological and evolutionary forces shaping microbial diversity in the human intestine
    • Ley RE, Peterson DA & Gordon JI (2006) Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 124: 837-848.
    • (2006) Cell , vol.124 , pp. 837-848
    • Ley, R.E.1    Peterson, D.A.2    Gordon, J.I.3
  • 24
    • 33644838781 scopus 로고    scopus 로고
    • Denaturing gradient electrophoresis (DGE) and single-strand conformation polymorphism (SSCP) molecular fingerprintings revisited by simulation and used as a tool to measure microbial diversity
    • Loisel P, Harmand J, Zemb O, Latrille E, Lobry C, Delgenes J-P & Godon J-J (2006) Denaturing gradient electrophoresis (DGE) and single-strand conformation polymorphism (SSCP) molecular fingerprintings revisited by simulation and used as a tool to measure microbial diversity. Environ Microbiol 8: 720-731.
    • (2006) Environ Microbiol , vol.8 , pp. 720-731
    • Loisel, P.1    Harmand, J.2    Zemb, O.3    Latrille, E.4    Lobry, C.5    Delgenes, J.-P.6    Godon, J.-J.7
  • 25
    • 0032956143 scopus 로고    scopus 로고
    • Developmental microbial ecology of the neonatal gastrointestinal tract
    • Mackie RI, Sghir A & Gaskins HR (1999) Developmental microbial ecology of the neonatal gastrointestinal tract. Am J Clin Nutr 69: 1035S-1045S.
    • (1999) Am J Clin Nutr , vol.69
    • Mackie, R.I.1    Sghir, A.2    Gaskins, H.R.3
  • 26
    • 67649199638 scopus 로고    scopus 로고
    • Probing the role of commensals in propagating antibiotic resistance should help preserve the efficacy of these critical drugs
    • Marshall B, Ochieng D & Levy S (2009) Probing the role of commensals in propagating antibiotic resistance should help preserve the efficacy of these critical drugs. Microbe 4: 231-238.
    • (2009) Microbe , vol.4 , pp. 231-238
    • Marshall, B.1    Ochieng, D.2    Levy, S.3
  • 30
    • 55949137170 scopus 로고    scopus 로고
    • Potential core species and satellite species in the bacterial community within the rabbit caecum
    • Monteils V, Cauquil L, Combes S, Godon J-J & Gidenne T (2008) Potential core species and satellite species in the bacterial community within the rabbit caecum. FEMS Microbiol Ecol 66: 620-629.
    • (2008) FEMS Microbiol Ecol , vol.66 , pp. 620-629
    • Monteils, V.1    Cauquil, L.2    Combes, S.3    Godon, J.-J.4    Gidenne, T.5
  • 31
    • 42049100522 scopus 로고    scopus 로고
    • Improved group-specific PCR primers for denaturing gradient gel electrophoresis analysis of the genetic diversity of complex microbial communities
    • Muhling M, Woolven-Allen J, Murrell JC & Joint I (2008) Improved group-specific PCR primers for denaturing gradient gel electrophoresis analysis of the genetic diversity of complex microbial communities. ISME J 2: 379-392.
    • (2008) ISME J , vol.2 , pp. 379-392
    • Muhling, M.1    Woolven-Allen, J.2    Murrell, J.C.3    Joint, I.4
  • 32
    • 0029198098 scopus 로고
    • Relationships between microflora and caecal fermentation in rabbits before and after weaning
    • Padilha MTS, Licois D, Gidenne T, Carré B & Fonty G (1995) Relationships between microflora and caecal fermentation in rabbits before and after weaning. Reprod Nutr Dev 35: 375-386.
    • (1995) Reprod Nutr Dev , vol.35 , pp. 375-386
    • Padilha, M.T.S.1    Licois, D.2    Gidenne, T.3    Carré, B.4    Fonty, G.5
  • 33
    • 0033397818 scopus 로고    scopus 로고
    • Caecal microflora and fermentation pattern in exclusively milk-fed young rabbits
    • Padilha MTS, Licois D, Gidenne T & Carré B (1999) Caecal microflora and fermentation pattern in exclusively milk-fed young rabbits. Reprod Nutr Dev 39: 223-230.
    • (1999) Reprod Nutr Dev , vol.39 , pp. 223-230
    • Padilha, M.T.S.1    Licois, D.2    Gidenne, T.3    Carré, B.4
  • 34
    • 0029957850 scopus 로고    scopus 로고
    • In vitro study of the age-dependent caecal fermentation pattern and methanogenesis in young rabbits
    • Piattoni F, Maertens L & Demeyer D (1996) In vitro study of the age-dependent caecal fermentation pattern and methanogenesis in young rabbits. Reprod Nutr Dev 36: 253-261.
    • (1996) Reprod Nutr Dev , vol.36 , pp. 253-261
    • Piattoni, F.1    Maertens, L.2    Demeyer, D.3
  • 35
    • 84985376716 scopus 로고
    • Determination of ethanol, volatile fatty acids, lactic and succinic acids in fermentation liquids by gas chromatography
    • Playne MJ (1985) Determination of ethanol, volatile fatty acids, lactic and succinic acids in fermentation liquids by gas chromatography. J Sci Food Agr 36: 638-644.
    • (1985) J Sci Food Agr , vol.36 , pp. 638-644
    • Playne, M.J.1
  • 38
    • 35348933745 scopus 로고    scopus 로고
    • Multivariate analyses in microbial ecology
    • Ramette A (2007) Multivariate analyses in microbial ecology. FEMS Microbiol Ecol 62: 142-160.
    • (2007) FEMS Microbiol Ecol , vol.62 , pp. 142-160
    • Ramette, A.1
  • 39
    • 5344244656 scopus 로고    scopus 로고
    • R Development Core Team () R Foundation for Statistical Computing, Vienna, Austria. Available at
    • R Development Core Team (2008) R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria. Available at
    • (2008) R: A Language and Environment for Statistical Computing
  • 41
    • 69949108799 scopus 로고    scopus 로고
    • The role of the intestinal microbiota in enteric infection
    • Sekirov I & Finlay BB (2009) The role of the intestinal microbiota in enteric infection. J Physiol 587: 4159-4167.
    • (2009) J Physiol , vol.587 , pp. 4159-4167
    • Sekirov, I.1    Finlay, B.B.2
  • 42
    • 4544357886 scopus 로고    scopus 로고
    • 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs
    • Skillman LC, Evans PN, Naylor GE, Morvan B, Jarvis GN & Joblin KN (2004) 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs. Anaerobe 10: 277-285.
    • (2004) Anaerobe , vol.10 , pp. 277-285
    • Skillman, L.C.1    Evans, P.N.2    Naylor, G.E.3    Morvan, B.4    Jarvis, G.N.5    Joblin, K.N.6
  • 44
    • 57449115152 scopus 로고    scopus 로고
    • A window of environmental dependence is evident in multiple phylogenetically distinct subgroups in the faecal community of piglets
    • Thompson CL & Holmes AJ (2009) A window of environmental dependence is evident in multiple phylogenetically distinct subgroups in the faecal community of piglets. FEMS Microbiol Lett 290: 91-97.
    • (2009) FEMS Microbiol Lett , vol.290 , pp. 91-97
    • Thompson, C.L.1    Holmes, A.J.2
  • 45
    • 46749145764 scopus 로고    scopus 로고
    • The immediate environment during postnatal development has long-term impact on gut community structure in pigs
    • Thompson CL, Wang B & Holmes AJ (2008) The immediate environment during postnatal development has long-term impact on gut community structure in pigs. ISME J 2: 739-748.
    • (2008) ISME J , vol.2 , pp. 739-748
    • Thompson, C.L.1    Wang, B.2    Holmes, A.J.3
  • 46
    • 0017898240 scopus 로고
    • Ammonia determination based on indophenol formation with sodium salicylate
    • Verdouw H, Van Echteld CJA & Dekkers EMJ (1977) Ammonia determination based on indophenol formation with sodium salicylate. Water Res 12: 399-402.
    • (1977) Water Res , vol.12 , pp. 399-402
    • Verdouw, H.1    Van Echteld, C.J.A.2    Dekkers, E.M.J.3
  • 47
    • 0034547651 scopus 로고    scopus 로고
    • Examination of two years of community dynamics in an anaerobic bioreactor using fluorescence polymerase chain reaction (PCR) single-strand conformation polymorphism analysis
    • Zumstein E, Moletta R & Godon JJ (2000) Examination of two years of community dynamics in an anaerobic bioreactor using fluorescence polymerase chain reaction (PCR) single-strand conformation polymorphism analysis. Environ Microbiol 2: 69-78.
    • (2000) Environ Microbiol , vol.2 , pp. 69-78
    • Zumstein, E.1    Moletta, R.2    Godon, J.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.