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Volumn 45, Issue 4, 2011, Pages 576-581

Differential expression of microRNA-2b with potential target coding P25 in the fifth instar larvae posterior silk gland of the silkworm

Author keywords

in silico; microRNA; P25 gene; silkworm

Indexed keywords

BOMBYX MORI;

EID: 79961161710     PISSN: 00268933     EISSN: 16083245     Source Type: Journal    
DOI: 10.1134/S0026893311040133     Document Type: Article
Times cited : (13)

References (37)
  • 1
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • Ambros V. 2004. The functions of animal microRNAs. Nature. 431, 350-355.
    • (2004) Nature. , vol.431 , pp. 350-355
    • Ambros, V.1
  • 2
    • 0027751663 scopus 로고
    • The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
    • Lee R. C., Feinbaum R. L., Ambros V. 1993. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell. 75, 843-854.
    • (1993) Cell. , vol.75 , pp. 843-854
    • Lee, R.C.1    Feinbaum, R.L.2    Ambros, V.3
  • 4
    • 80052492672 scopus 로고    scopus 로고
    • The discovery approaches and detection methods of microRNAs
    • doi: 10. 1007/s11033-010-0532-1
    • Huang Y., Zou Q., Wang S. P., Tang S. M., Zhang G. Z., Shen X. J. 2010. The discovery approaches and detection methods of microRNAs. Mol. Biol. Rep. doi: 10. 1007/s11033-010-0532-1.
    • (2010) Mol. Biol. Rep.
    • Huang, Y.1    Zou, Q.2    Wang, S.P.3    Tang, S.M.4    Zhang, G.Z.5    Shen, X.J.6
  • 5
    • 3042767202 scopus 로고    scopus 로고
    • MicroRNAs: small RNAs with a big role in gene regulation
    • He L., Hannon G. J. 2004. MicroRNAs: small RNAs with a big role in gene regulation. Nature Rev. Genet. 5, 522-531.
    • (2004) Nature Rev. Genet. , vol.5 , pp. 522-531
    • He, L.1    Hannon, G.J.2
  • 6
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • Lewis B. P., Burge C. B., Bartel D. P. 2005. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell. 120, 15-20.
    • (2005) Cell. , vol.120 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 8
    • 0020776329 scopus 로고
    • Developmental variations of a nonfibroin mRNA of Bombyx mori silkgland, encoding for a low-molecular-weight silk protein
    • Couble P., Moine A., Garel A., Prudhomme J. C. 1983. Developmental variations of a nonfibroin mRNA of Bombyx mori silkgland, encoding for a low-molecular-weight silk protein. Dev. Biol. 97, 398-407.
    • (1983) Dev. Biol. , vol.97 , pp. 398-407
    • Couble, P.1    Moine, A.2    Garel, A.3    Prudhomme, J.C.4
  • 9
    • 0016613488 scopus 로고
    • The Bombyx mori silk proteins: characterization of large polypeptides
    • Sprague K. U. 1975. The Bombyx mori silk proteins: characterization of large polypeptides. Biochemistry. 14, 925-931.
    • (1975) Biochemistry , vol.14 , pp. 925-931
    • Sprague, K.U.1
  • 10
    • 0024463909 scopus 로고
    • Primary structure of the silk fibroin light chain determined by cDNA sequencing and peptide analysis
    • Yamaguchi K., Kikuchi Y., Takagi T., Kikuchi A., Oyama F. 1989. Primary structure of the silk fibroin light chain determined by cDNA sequencing and peptide analysis. J. Mol. Biol. 210, 127-139.
    • (1989) J. Mol. Biol. , vol.210 , pp. 127-139
    • Yamaguchi, K.1    Kikuchi, Y.2    Takagi, T.3    Kikuchi, A.4    Oyama, F.5
  • 11
    • 0022360273 scopus 로고
    • Molecular cloning of the fibroin light chain complementary DNA and its use in the study of the expression of the light chain gene in the posterior silk gland of Bombyx mori
    • Kimura K., Oyama F., Ueda H., Mizuno S., Shimura K. 1985. Molecular cloning of the fibroin light chain complementary DNA and its use in the study of the expression of the light chain gene in the posterior silk gland of Bombyx mori. Experientia. 41, 1167-1171.
    • (1985) Experientia , vol.41 , pp. 1167-1171
    • Kimura, K.1    Oyama, F.2    Ueda, H.3    Mizuno, S.4    Shimura, K.5
  • 12
    • 0034704173 scopus 로고    scopus 로고
    • Silk fibroin of Bombyx mori is secreted, assembling a high molecular mass elementary unit consisting of H-chain, L-chain, and P25, with a 6: 6: 1 molar ratio
    • Inoue S., Tanaka K., Arisaka F., Kimura S., Ohtomo K. 2000. Silk fibroin of Bombyx mori is secreted, assembling a high molecular mass elementary unit consisting of H-chain, L-chain, and P25, with a 6: 6: 1 molar ratio. J. Biol. Chem. 275, 40517-40528.
    • (2000) J. Biol. Chem. , vol.275 , pp. 40517-40528
    • Inoue, S.1    Tanaka, K.2    Arisaka, F.3    Kimura, S.4    Ohtomo, K.5
  • 14
    • 0020407605 scopus 로고
    • Structural analysis of sericin genes: Homologies with fibroin gene in the 5′ flanking nucleotide sequences
    • Okamoto H., Ishikawa E., Suzuki Y. 1982. Structural analysis of sericin genes: Homologies with fibroin gene in the 5′ flanking nucleotide sequences. J. Biol. Chem. 257, 15192-15199.
    • (1982) J. Biol. Chem. , vol.257 , pp. 15192-15199
    • Okamoto, H.1    Ishikawa, E.2    Suzuki, Y.3
  • 15
    • 59649091117 scopus 로고    scopus 로고
    • Identification of conserved microRNAs in Bombyx mori (silk-worm) and regulation of fibroin L chain production by microRNAs in heterologous system. Insect
    • Cao J., Tong C., Wu X., Lv J., Yang Z. 2008. Identification of conserved microRNAs in Bombyx mori (silk-worm) and regulation of fibroin L chain production by microRNAs in heterologous system. Insect. Biochem. Mol. Biol. 38, 1066-1071.
    • (2008) Biochem. Mol. Biol. , vol.38 , pp. 1066-1071
    • Cao, J.1    Tong, C.2    Wu, X.3    Lv, J.4    Yang, Z.5
  • 17
    • 77951953262 scopus 로고    scopus 로고
    • Got target? Computational methods for microRNA target prediction and their extension
    • Min H., Yoon S. 2010. Got target? Computational methods for microRNA target prediction and their extension. Exp. Mol. Med. 42, 233-244.
    • (2010) Exp. Mol. Med. , vol.42 , pp. 233-244
    • Min, H.1    Yoon, S.2
  • 18
    • 65849520676 scopus 로고    scopus 로고
    • Current tools for the identification of miRNA genes and their targets
    • Mendes N. D., Freitas A. T., Sagot M. F. 2009. Current tools for the identification of miRNA genes and their targets. Nucleic Acids Res. 37, 2419-2433.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 2419-2433
    • Mendes, N.D.1    Freitas, A.T.2    Sagot, M.F.3
  • 19
    • 4644237189 scopus 로고    scopus 로고
    • Fast and effective prediction of microRNA/target duplexes
    • Rehmsmeier M., Steffen P., Hochsmann M., Giegerich R. 2004. Fast and effective prediction of microRNA/target duplexes. RNA. 10, 1507-1517.
    • (2004) Rna , vol.10 , pp. 1507-1517
    • Rehmsmeier, M.1    Steffen, P.2    Hochsmann, M.3    Giegerich, R.4
  • 20
    • 33748587841 scopus 로고    scopus 로고
    • A pattern-based method for the identification of microRNA binding sites and their corresponding heteroduplexes
    • Miranda K. C., Huynh T., Tay Y., Ang Y. S., Tam W. L. 2006. A pattern-based method for the identification of microRNA binding sites and their corresponding heteroduplexes. Cell. 126, 1203-1217.
    • (2006) Cell. , vol.126 , pp. 1203-1217
    • Miranda, K.C.1    Huynh, T.2    Tay, Y.3    Ang, Y.S.4    Tam, W.L.5
  • 21
    • 51849142774 scopus 로고    scopus 로고
    • The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
    • Yu X., Zhou Q., Li S. C., Luo Q., Cai Y. 2008. The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages. PLoS One. 3, e2997.
    • (2008) PLoS One. , vol.3
    • Yu, X.1    Zhou, Q.2    Li, S.C.3    Luo, Q.4    Cai, Y.5
  • 22
    • 44949231424 scopus 로고    scopus 로고
    • Analyzing real-time PCR data by the comparative C(T) method
    • Schmittgen T. D., Livak K. J. 2008. Analyzing real-time PCR data by the comparative C(T) method. Nature Protoc. 3, 1101-1108.
    • (2008) Nature Protoc. , vol.3 , pp. 1101-1108
    • Schmittgen, T.D.1    Livak, K.J.2
  • 23
    • 37349010293 scopus 로고    scopus 로고
    • The 5′ untranslated region of the maize alcohol dehydrogenase gene provides efficient translation of mRNA in plants under stress conditions
    • Mardanova E. S., Zamchuk L. A., Ravin N. V. 2007. The 5′ untranslated region of the maize alcohol dehydrogenase gene provides efficient translation of mRNA in plants under stress conditions. Mol. Biol. (Moscow). 41, 914-919.
    • (2007) Mol. Biol. (Moscow) , vol.41 , pp. 914-919
    • Mardanova, E.S.1    Zamchuk, L.A.2    Ravin, N.V.3
  • 26
    • 0035035529 scopus 로고    scopus 로고
    • Differential expression of the fibroin gene in developmental stages of silkworm, Antheraea mylitta (Saturniidae)
    • Datta A., Ghosh A. K., Kundu S. C. 2001. Differential expression of the fibroin gene in developmental stages of silkworm, Antheraea mylitta (Saturniidae). Comp. Biochem. Physiol. B: Biochem. Mol. Biol. 129, 197-204.
    • (2001) Comp. Biochem. Physiol. B: Biochem. Mol. Biol. , vol.129 , pp. 197-204
    • Datta, A.1    Ghosh, A.K.2    Kundu, S.C.3
  • 27
    • 70350444738 scopus 로고    scopus 로고
    • MicroRNA expression profiling during the life cycle of the silkworm (Bombyx mori)
    • Liu S., Zhang L., Li, Q., Zhao P., Duan J., Cheng D., Xiang Z., Xia Q. 2009. MicroRNA expression profiling during the life cycle of the silkworm (Bombyx mori). BMC Genomics. 10, 455.
    • (2009) BMC Genomics , vol.10 , pp. 455
    • Liu, S.1    Zhang, L.2    Li, Q.3    Zhao, P.4    Duan, J.5    Cheng, D.6    Xiang, Z.7    Xia, Q.8
  • 28
    • 34249033020 scopus 로고    scopus 로고
    • MicroRNA detection and target prediction: Integration of computational and experimental approaches
    • Chaudhuri K., Chatterjee R. 2007. MicroRNA detection and target prediction: Integration of computational and experimental approaches. DNA Cell Biol. 26, 321-337.
    • (2007) DNA Cell Biol. , vol.26 , pp. 321-337
    • Chaudhuri, K.1    Chatterjee, R.2
  • 29
    • 77949268292 scopus 로고    scopus 로고
    • Computational approaches for microRNA studies: A review
    • Li L., Xu J., Yang D., Tan X., Wang H. 2010. Computational approaches for microRNA studies: A review. Mamm. Genome. 21, 1-12.
    • (2010) Mamm. Genome. , vol.21 , pp. 1-12
    • Li, L.1    Xu, J.2    Yang, D.3    Tan, X.4    Wang, H.5
  • 30
    • 33750318273 scopus 로고    scopus 로고
    • A guide through present computational approaches for the identification of mammalian microRNA targets
    • Sethupathy P., Megraw M., Hatzigeorgiou A. G. 2006. A guide through present computational approaches for the identification of mammalian microRNA targets. Nature Methods. 3, 881-886.
    • (2006) Nature Methods. , vol.3 , pp. 881-886
    • Sethupathy, P.1    Megraw, M.2    Hatzigeorgiou, A.G.3
  • 31
    • 75649108609 scopus 로고    scopus 로고
    • Progress in miRNA target prediction and identification
    • Xia W., Cao G., Shao N. 2009. Progress in miRNA target prediction and identification. Sci. China C Life Sci. 52, 1123-1130.
    • (2009) Sci. China C Life Sci. , vol.52 , pp. 1123-1130
    • Xia, W.1    Cao, G.2    Shao, N.3
  • 32
    • 36749026906 scopus 로고    scopus 로고
    • Switching from repression to activation: microRNAs can up-regulate translation
    • Vasudevan S., Tong Y., Steitz J. A. 2007. Switching from repression to activation: microRNAs can up-regulate translation. Science. 318, 1931-1934.
    • (2007) Science , vol.318 , pp. 1931-1934
    • Vasudevan, S.1    Tong, Y.2    Steitz, J.A.3
  • 33
    • 33947262696 scopus 로고    scopus 로고
    • AU-rich-element-mediated upregulation of translation by FXR1 and argonaute 2
    • Vasudevan S., Steitz J. A. 2007. AU-rich-element-mediated upregulation of translation by FXR1 and argonaute 2. Cell. 128, 1105-1118.
    • (2007) Cell. , vol.128 , pp. 1105-1118
    • Vasudevan, S.1    Steitz, J.A.2
  • 34
    • 37549033548 scopus 로고    scopus 로고
    • The two faces of miRNA
    • Buchan J. R., Parker R. 2007. The two faces of miRNA. Science. 318, 1877-1878.
    • (2007) Science. , vol.318 , pp. 1877-1878
    • Buchan, J.R.1    Parker, R.2
  • 36
    • 29144509665 scopus 로고    scopus 로고
    • Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development
    • Aboobaker A. A., Tomancak P., Patel N., Rubin G. M., Lai E. C. 2005. Drosophila microRNAs exhibit diverse spatial expression patterns during embryonic development. Proc. Natl. Acad. Sci. U. S. A. 102, 18017-18022.
    • (2005) Proc. Natl. Acad. Sci. U. S. A. , vol.102 , pp. 18017-18022
    • Aboobaker, A.A.1    Tomancak, P.2    Patel, N.3    Rubin, G.M.4    Lai, E.C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.