Draft genome sequence of Kocuria rhizophila P7-4

Journal of Bacteriology

Volumn 193, Issue 16, 2011, Pages 4286-4287

  Kim, Woo Jin ^a   Kim, Young Ok ^a   Kim, Dae Soo ^b   Choi, Sang Haeng ^b   Kim, Dong Wook ^b   Lee, Jun Seo ^c   Kong, Hee Jeong ^a   Nam, Bo Hye ^a   Kim, Bong Seok ^a   Lee, Sang Jun ^a   Park, Hong Seog ^b   Chae, Sung Hwa ^c  

^a National Fisheries Research and Development Institute (NFRDI)   (South Korea)

^b Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^c GNC Bio Inc   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID DERIVATIVE; ARGININE; BIOTIN; FATTY ACID; GENOMIC DNA; ISOLEUCINE; METHIONINE; RIBOSOME PROTEIN; RNA 5S;

BACTERIAL GENETICS; BACTERIUM ISOLATION; FATTY ACID SYNTHESIS; FISH; GENE SEQUENCE; GRAM POSITIVE BACTERIUM; KOCURIA RHIZOPHILA; NONHUMAN; NOTE; OPEN READING FRAME; PACIFIC OCEAN; PRIORITY JOURNAL; PROTEIN DEGRADATION; SIGANUS DOLIATUS; SIGNAL TRANSDUCTION;

ACTINOMYCETALES; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA;

KOCURIA RHIZOPHILA; SIGANUS DOLIATUS;

EID: 79961142379     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05334-11     Document Type: Note

References (12)

1. Altschul, S., et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
2. Aziz, R. K., et al. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
3. Birnboim, H. C., and J. Doly. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1513-1523.
4. Delcher, A. L., K. A. Bratke, E. C. Powers, and S. L. Salzberg. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
5. Fujita, K., et al. 2006. The cell structural properties of Kocuria rhizophila for aliphatic alcohol exposure. Enzyme Microb. Technol. 39:511-518.
6. Kim, S. B., et al. 2004. Kocuria marina sp. nov., a novel actinobacterium isolated from marine sediment. Int. J. Syst. Evol. Microbiol. 54:1617-1620.
7. Kovacs, G., et al. 1999. Kocuria palustris sp. nov. and Kocuria rhizophila sp.nov., isolated from the rhizoplane of the narrow-leaved cattail (Typha angustifolia). Int. J. Syst. Bacteriol. 49:167-173.
8. Lagesen, K., et al. 2007. RNAmmer: consistent and rapid annotation of rRNA genes. Nucleic Acids Res. 35:3100-3108.
9. Madigan, M., and J. Martinko. 2005. Brock biology of microorganisms, 11th ed. Prentice Hall, New York, NY.
10. Takarada, H., et al. 2008. Complete genome sequence of the soil Actinomycete Kocuria rhizophila. J. Bacteriol. 190:4139-4146.
11. Tang, J., and M. P. Gillevet. 2003. Reclassification of ATCC 9341 from Micrococcus luteus to Kocuria rhizophila. Int. J. Syst. Evol. Microbiol. 53:995-997.
12. Tatusov, R. L., E. V. Koonin, and D. J. Lipman. 1997. A genomic perspective on protein families. Science 278:631-637.