Sorption and distribution of copper in unsaturated Pseudomonas putida CZ1 biofilms as determined by X-ray fluorescence microscopy

Applied and Environmental Microbiology

Volumn 77, Issue 14, 2011, Pages 4719-4727

  Chen, Guangcun ^a,b   Chen, Xincai ^a   Yang, Yuanqiang ^a   Hay, Anthony G ^c   Yu, Xiaohan ^d   Chen, Yingxu ^a  

^a ZHEJIANG UNIVERSITY   (China)

^b ZHEJIANG UNIVERSITY   (China)

^c Department of Obstetrics Gynecology   (United States)

^d SHANGHAI INSTITUTE OF APPLIED PHYSICS   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; BIOFILMS; FLUORESCENCE; FLUORESCENCE MICROSCOPY; X RAY ABSORPTION; X RAY ABSORPTION NEAR EDGE STRUCTURE SPECTROSCOPY;

COPPER CONCENTRATION; COPPER PHOSPHATE; LIVE/DEAD STAINING; MEMBRANE INTERFACE; PSEUDOMONAS PUTIDA CZ1; SPATIAL AND TEMPORAL DISTRIBUTION; X-RAY ABSORPTION NEAR-EDGE STRUCTURE; X-RAY FLUORESCENCE MICROSCOPY;

COPPER COMPOUNDS;

BACTERIUM; BIOACCUMULATION; BIODEGRADATION; BIOFILM; BIOMASS; CALCIUM; COPPER; IMMOBILIZATION; MEMBRANE; SORPTION; X-RAY FLUORESCENCE; XANES SPECTROSCOPY;

PSEUDOMONAS PUTIDA;

EID: 79961097293     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00125-11     Document Type: Article

References (39)

1. Alvarez, S., and C. A. Jerez. 2004. Copper ions stimulate polyphosphate degradation and phosphate efflux in Acidithiobacillus ferrooxidans. Appl. Environ. Microbiol. 70:5177-5182.
2. Appanna, V. D., and M. S. Pierre. 1996. Aluminum elicits exocellular phosphatidylethanolamine production in Pseudomonas fluorescens. Appl. Environ. Microbiol. 62:2778-2782.
3. Atlas, R. M. 2005. Handbook of media for environmental microbiology, 2nd ed., p. 459. CRC Press, Boca Raton, FL.
4. Battin, T. J., et al. 2007. Microbial landscapes: new paths to biofilm research. Nat. Rev. Microbiol. 5:76-81.
5. Cánovas, D., I. Cases, and V. de Lorenzo. 2003. Heavy metal tolerance and metal homeostasis in Pseudomonas putida as revealed by complete genome analysis. Environ. Microbiol. 5:1242-1256.
6. Chen, X. C., et al. 2009. Interaction of Pseudomonas putida CZ1 with clays and ability of the composite to immobilize copper and zinc from solution. Bioresour. Technol. 100:330-337.
7. Chen, X. C., et al. 2006. Tolerance and biosorption of copper and zinc by Pseudomonas putida CZ1 isolated from metal-polluted soil. Can. J. Microbiol. 52:308-316.
8. Chen, X. C., et al. 2007. Determination of copper binding in Pseudomonas putida CZ1 by chemical modifications and X-ray absorption spectroscopy. Appl. Microbiol. Biotechnol. 74:881-889.
9. Costerton, J. W., Z. Lewandowski, D. E. Caldwell, D. R. Korber, and H. M. Lappin-Scott. 1995. Microbial biofilms. Annu. Rev. Microbiol. 49:711-745.
10. Davison, W., G. R. Fones, and G. W. Grime. 1997. Dissolved metals in surface sediment and a microbial mat at 100-μm resolution. Nature 387:885-888.
11. Finney, L., et al. 2007. X-ray fluorescence microscopy reveals large-scale relocalization and extracellular translocation of cellular copper during angiogenesis. Proc. Natl. Acad. Sci. U. S. A. 104:2247-2252.
12. Gadd, G. M. 2000. Bioremedial potential of microbial mechanisms of metal mobilization and immobilization. Curr. Opin. Biotechnol. 11:271-279.
13. Hamel, R., R. Levasseur, and V. D. Appanna. 1999. Oxalic acid production and aluminum tolerance in Pseudomonas fluorescens. J. Inorg. Biochem. 76:99-104.
14. Harrison, J. J., H. Ceri, C. A. Stremick, and R. J. Turner. 2004. Biofilm susceptibility to metal toxicity. Environ. Microbiol. 6:1220-1227.
15. Harrison, J. J., H. Ceri, and R. J. Turner. 2007. Multimetal resistance and tolerance in microbial biofilms. Nat. Rev. Microbiol. 5:928-938.
16. Holden, P. A., J. R. Hunt, and M. K. Firestone. 1997. Toluene diffusion and reaction in unsaturated Pseudomonas putida biofilms. Biotechnol. Bioeng. 56:656-670.
17. Hu, Z. Q., et al. 2005. Determination of spatial distributions of zinc and active biomass in microbial biofilms by two-photon laser scanning microscopy. Appl. Environ. Microbiol. 71:4014-4021.
18. Hu, Z. Q., et al. 2007. Spatial distributions of copper in microbial biofilms by scanning electrochemical microscopy. Environ. Sci. Technol. 41:936-941.
19. Kemner, K. M., et al. 2004. Elemental and redox analysis of single bacterial cells by X-ray microbeam analysis. Science 306:686-687.
20. Latimer, J., et al. 2009. A novel method for exploring elemental composition of microbial communities: laser ablation-inductively coupled plasma-mass spectrometry of intact bacterial colonies. J. Microbiol. Methods 79:329-335.
21. Lensbouer, J. J., A. Patel, J. P. Sirianni, and R. P. Doyle. 2008. Functional characterization and metal ion specificity of the metal-citrate complex transporter from Streptomyces coelicolor. J. Bacteriol. 190:5616-5623.
22. Lugtenberg, B. J. J., L. Dekkers, and G. V. Bloemberg. 2001. Molecular determinants of rhizosphere colonization by Pseudomonas. Annu. Rev. Phytopathol. 39:461-490.
23. Paktunc, D., A. Foster, S. Heald, and G. Laflamme. 2004. Speciation and characterization of arsenic in gold ores and cyanidation tailings using X-ray absorption spectroscopy. Geochim. Cosmochim. Acta 68:969-983.
24. Paktunc, D. 2004. A computer program for analysing complex bulk XAFS spectra and for performing significance tests. J. Synchroton Radiat. 11:295-298.
25. Phoenix, V. R., and W. M. Holmes. 2008. Magnetic resonance imaging of structure, diffusivity, and copper immobilization in a phototrophic biofilm. Appl. Environ. Microbiol. 74:4934-4943.
26. 0 reductase in Pseudomonas putida KT2440. J. Bacteriol. 189: 5361-5371.
27. Rani, S. A., et al. 2007. Spatial patterns of DNA replication, protein synthesis, and oxygen concentration within bacterial biofilms reveal diverse physiological states. J. Bacteriol. 189:4223-4233.
28. Saxena, D., and S. Srivastava. 1998. Carbon source-starvation-induced precipitation of copper by Pseudomonas putida strain S4. World J. Microbiol. Biotechnol. 14:921-923.
29. Shi, J., et al. 2008. An X-ray absorption spectroscopy investigation of speciation and biotransformation of copper in Elsholtzia splendens. Plant Soil 302:163-174.
30. Steinberger, R. E., and P. A. Holden. 2004. Macromolecular composition of unsaturated Pseudomonas aeruginosa biofilms with time and carbon source. Biofilms 1:37-47.
31. Stewart, P. S. 2003. Diffusion in biofilms. J. Bacteriol. 185:1485-1491.
32. Stewart, P. S., and M. J. Franklin. 2008. Physiological heterogeneity in biofilms. Nat. Rev. Microbiol. 6:199-210.
33. Templeton, A., and E. Knowles. 2009. Microbial transformations of minerals and metals: recent advances in geomicrobiology derived from synchrotron-based X-ray spectroscopy and X-ray microscopy. Annu. Rev. Earth Planet. Sci. 37:367-391.
34. Thomas, R. A. P., A. J. Beswick, G. Basnakova, R. Moller, and L. E. Macaskie. 2000. Growth of naturally occurring microbial isolates in metal-citrate medium and bioremediation of metal-citrate wastes. J. Chem. Technol. Biotechnol. 75:187-195.
35. Toner, B., S. Fakra, M. Villalobos, T. Warwick, and G. Sposito. 2005. Spatially resolved characterization of biogenic manganese oxide production within a bacterial biofilm. Appl. Environ. Microbiol. 71:1300-1310.
36. van Hullebusch, E., M. Zandvoort, and P. Lens. 2003. Metal immobilisation by biofilms: mechanisms and analytical tools. Rev. Environ. Sci. Biotechnol. 2:9-33.
37. Wentland, E. J., P. S. Stewart, C. T. Huang, and G. A. McFeters. 1996. Spatial variations in growth rate within Klebsiella pneumoniae colonies and biofilm. Biotechnol. Prog. 12:316-321.
38. White, C., and G. M. Gadd. 2000. Copper accumulation by sulfate-reducing bacterial biofilms. FEMS Microbiol. Lett. 183:313-318.
39. Yang, J. J., et al. 2010. Transformation of lead solid fraction in the rhizosphere of Elsholtzia splendens: the importance of organic matter. Water Air Soil Pollut. 205:333-342.