Electroactivity of phototrophic river biofilms and constitutive cultivable bacteria

Applied and Environmental Microbiology

Volumn 77, Issue 15, 2011, Pages 5394-5401

  Lyautey, Emilie ^a,b,e   Cournet, Amandine ^a   Morin, Soizic ^c   Boulêtreau, Stéphanie ^a,b   Etcheverry, Luc ^a   Charcosset, Jean Yves ^a,b   Delmas, François ^c   Bergel, Alain ^a   Garabetian, Frédéric ^d  

^a UNIVERSITÉ DE TOULOUSE   (France)

^b CNRS   (France)

^c CEMAGREF   (France)

^d UNIVERSITÉ DE BORDEAUX   (France)

^e UNIVERSITÉ DE SAVOIE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ACTINOBACTERIA; BACTERIAL POPULATION; BACTERIAL STRAINS; BIOFILM DEVELOPMENT; CALOMEL ELECTRODES; CATALYZE OXYGEN; CATHODIC PEAK POTENTIALS; CHLOROPHYLL A; COPPER ELECTRODES; CULTIVABLE BACTERIA; DRY MASS; ELECTRO-ACTIVITY; FIRMICUTES; GAMMAPROTEOBACTERIA; IN-SITU; INOCULA; METALLIC ELECTRODES; OLIGOTROPHIC CONDITIONS; PEAK AMPLITUDE; STAINLESS STEEL ELECTRODE; WORKING ELECTRODE;

BACTERIA; BACTERIOLOGY; CHLOROPHYLL; CYCLIC VOLTAMMETRY; ELECTRODES; ELECTROLYTIC REDUCTION; FUEL CELLS; OXYGEN; POPULATION STATISTICS; RATING; RIVERS; STAINLESS STEEL;

BIOFILMS;

CHLOROPHYLL; CHLOROPHYLL A; COPPER; OXYGEN; RNA 16S; SEA WATER; STAINLESS STEEL;

ALLOY; AMPLITUDE; ASSESSMENT METHOD; BACTERIUM; BIOFILM; CATALYSIS; CHLOROPHYLL; COMMUNITY STRUCTURE; COPPER; CULTIVATION; DATA SET; ELECTRODE; ELECTRODYNAMICS; FUEL CELL; OLIGOTROPHIC ENVIRONMENT; OXYGEN; PHENOTYPE; PHOTOAUTOTROPHY; PHYLOGENETICS; POPULATION STRUCTURE; RIVER; SPECIES DIVERSITY;

ARTICLE; BACTERIAL PHENOMENA AND FUNCTIONS; BACTERIUM; BIOENERGY; BIOFILM; ELECTRICITY; ELECTROCHEMISTRY; ELECTRODE; GENETICS; ISOLATION AND PURIFICATION; METABOLISM; MICROBIOLOGY; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; OXIDATION REDUCTION REACTION; PHOTOTROPISM; PHYLOGENY; RIVER;

BACTERIA; BACTERIAL PHYSIOLOGICAL PHENOMENA; BIOELECTRIC ENERGY SOURCES; BIOFILMS; CHLOROPHYLL; COPPER; ELECTRICITY; ELECTROCHEMISTRY; ELECTRODES; MOLECULAR SEQUENCE DATA; OXIDATION-REDUCTION; OXYGEN; PHOTOTROPISM; PHYLOGENY; RIVERS; RNA, RIBOSOMAL, 16S; SEAWATER; STAINLESS STEEL;

ACTINOBACTERIA; BACTERIA (MICROORGANISMS); BACTEROIDETES; FIRMICUTES; GAMMAPROTEOBACTERIA;

EID: 79961068520     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.00500-11     Document Type: Article

References (64)

1. Ancion, P. Y., G. Lear, and G. D. Lewis. 2010. Three common metal contaminants of urban runoff (Zn, Cu & Pb) accumulate in freshwater biofilm and modify embedded bacterial communities. Environ. Pollut. 158:2738- 2745.
2. Araya, R., K. Tani, T. Takagi, N. Yamaguchi, and M. Nasu. 2003. Bacterial activity and community composition in stream water and biofilm from an urban river determined by fluorescent in situ hybridization and DGGE analysis. FEMS Microbiol. Ecol. 43:111-119.
3. Atekwana, E. A., et al. 2004. Evidence for microbial enhanced electrical conductivity in hydrocarbon-contaminated sediments. Geophys. Res. Lett. 31:L23501-L23504.
4. Boivin, M. Y., et al. 2005. Effects of copper and temperature on aquatic bacterial communities. Aquat. Toxicol. 71:345-356.
5. Bond, D. R., D. E. Holmes, L. M. Tender, and D. R. Lovley. 2002. Electrodereducing microorganisms that harvest energy from marine sediments. Science 295:483-485.
6. Boulêtreau, S., et al. 2011. Rotating disk electrodes to assess river biofilm thickness and elasticity. Water Res. 45:1347-1357.
7. Brümmer, I. H. M., W. Fehr, and I. Wagner-Döbler. 2000. Biofilm community structure in polluted rivers: abundance of dominant phylogenetic groups over a complete annual cycle. Appl. Environ. Microbiol. 66:3078-3082.
8. Cao, X., X. Huang, N. Boon, P. Liang, and M. Fan. 2008. Electricity generation by an enriched phtototrophic consortium in a microbial fuel cell. Electrochem. Commun. 10:1392-1395.
9. Cattaneo, A., and M. C. Amireault. 1992. How artificial are artificial substrata for periphyton? J. N. Am. Benthol. Soc. 11:244-256.
10. Cole, J. R., et al. 2009. The Ribosomal Database Project: improved alignments and new tools for rRNA analysis. Nucleic Acids Res. 37(Database issue):D141-D145.
11. Colwell, R. R., and D. J. Grimes. 2000. Non culturable microorganisms in the environment. Chapman & Hall, London, United Kingdom.
12. Cournet, A., M. Bergé, C. Roques, A. Bergel, and M. L. Délia. 2010. Electrochemical reduction of oxygen catalyzed by Pseudomonas aeruginosa. Electrochim. Acta 17:4902-4908.
13. Cournet, A., M. L. Délia, A. Bergel, C. Roques, and M. Bergé. 2010. Electrochemical reduction of oxygen catalyzed by a wide range of bacteria including Gram-positive. Electrochem. Commun. 12:505-508.
14. Dickinson, W. H., and Z. Lewandowski. 1996. Manganese biofouling and the corrosion behavior of stainless steel. Biofouling 10:79.
15. Dulon, S., S. Parot, M. L. Délia, and A. Bergel. 2007. Electroactive biofilms: new means for electrochemistry. J. Appl. Electrochem. 37:173-179.
16. Dupont, I., D. Féron, and G. Novel. 1998. Effect of glucose oxidase activity on corrosion potential of stainless steels in seawaters. Int. Biodeterior. Biodegradation 41:13-18.
17. Erable, B., et al. 2010. Marine biofilm in laboratory closed-systems. Bioelectrochemistry 78:30-38.
18. Faimali, M., et al. 2010. Electrochemical activity and bacterial diversity of natural marine biofilm. Bioelectrochemistry 78:51-56.
19. Féron, D., and M. Roy. 2000. Corrosion behaviour of stainless steel in natural waters: focus on microbiological and chemical aspects. In Proceedings of EuroCorr 2000. The Institute of Materials, London, United Kingdom.
20. Freguia, S., S. Tsujimura, and K. Kano. 2010. Electron transfer pathway in microbial oxygen biocathodes. Electrochim. Acta 55:813-818.
21. Gerhardt, P., R. G. E. Murray, W. A. Wood, and N. R. Krieg. 1994. Methods for general and molecular bacteriology. American Society for Microbiology, Washington, DC.
22. Gralnick, J. A., and D. K. Newman. 2007. Extracellular respiration. Mol. Microbiol. 65:1-11.
23. He, Z., H. Shao, and L. T. Angenent. 2007. Increased power production from a sediment microbial fuel cell with a rotating cathode. Biosens. Bioelectron. 22:3252-3255.
24. He, Z., J. Kan, F. Mansfeld, L. T. Angenent, and K. H. Nealson. 2009. Self-sustained phototrophic microbial fuel cells based on the synergistic cooperation between photosynthetic microorganisms and heterotrophic bacteria. Environ. Sci. Technol. 43:1648-1654.
25. Hewson, I., and J. A. Fuhrman. 2004. Bacterioplankton species richness and diversity along an estuarine gradient in Moreton Bay, Australia. Appl. Environ. Microbiol. 70:3425-3433.
26. Huang, L., J. M. Regan, and X. Quan. 2011. Electron transfer mechanisms, new applications, and performance of biocathode microbial fuel cells. Bioresour. Technol. 102:316-323.
27. Jang, J. K., I. S. Chang, H. Moon, K. H. Kang, and B. H. Kim. 2006. Nitrilotriacetic acid degradation under microbial fuel cell environment. Biotechnol. Bioeng. 95:772-774.
28. Jeffrey, S. W., and G. H. Humphrey. 1975. New spectrophotometric equation for determining chlorophyll a, b, c1 and c2. Biochem. Physiol. Pflanz 167: 194-204.
29. Kim, B. H., H. J. Kim, M. S. Hyun, and D. H. Park. 1999. Direct electrode reaction of Fe(III)-reducing bacterium, Shewanella putrefaciens. J. Microbiol. Biotechnol. 9:127-131.
30. Krammer, K., and H. Lange-Bertalot. 1986-;-1991. Bacillariophyceae. 1 Teil. Naviculaceae. 2 Teil. Bacillariaceae, Epithemiaceae, Surirellaceae. 3 Teil. Centrales, Fragilariaceae, Eunotiaceae. 4 Teil. Achnanthaceae. Kritische Ergänzungen zu Navicula (Lineolatae) und Gomphonema. In H. Ettl, J. Gerloff, H. Heynig, and D. Mollenhauer (ed.), Susswasserflora von Mitteleuropa. Band 2/1-4. G. Fischer Verlag, Stuttgart, Germany.
31. Kropf, S., H. Heuer, M. Grüning, and K. Smalla. 2004. Significance test for comparing complex microbial community fingerprints using pairwise similarity measures. J. Microbiol. Methods 57:187-195.
32. Lai, M. E., and A. Bergel. 2000. Electrochemical reduction of oxygen by glassy carbon: catalysis by catalase. J. Electroanal. Chem. 494:30-40.
33. Landoulsi, J., K. El Kirat, C. Richard, D. Feron, and S. Pulvin. 2008. Enzymatic approach in microbial-influenced corrosion: a review based on stainless steels in natural waters. Environ. Sci. Technol. 42:2233-2242.
34. Little, B., et al. 1991. Impact of biofouling on the electrochemical behaviour of 304 stainless steel in natural seawater. Biofouling 3:45-59.
35. Lock, M. A. 1993. Attached microbial communities in rivers, p. 113-138. In T. E. Ford (ed.), Aquatic microbiology-an ecological approach. Blackwell Scientific Publications, Oxford, United Kingdom.
36. Logan, B. E. 2009. Exoelectrogenic bacteria that power microbial fuel cells. Nature 7:375-381.
37. Lovley, D. R. 2008. The microbe electric: conversion of organic matter to electricity. Curr. Opin. Biotechnol. 19:564-571.
38. Lozupone, C., and R. Knight. 2005. UniFrac: a new phylogenetic method for comparing microbial communities. Appl. Environ. Microbiol. 71:8228-8235.
39. Lozupone, C., M. Hamady, and R. Knight. 2006. UniFrac-an online tool for comparing microbial community diversity in a phylogenetic context. BMC Bioinformatics 7:371.
40. Lyautey, E., S. Teissier, J. Y. Charcosset, J. L. Rols, and F. Garabetian. 2003. Bacterial diversity of phototrophic river biofilm assemblages of an anthropised river section, assessed by DGGE analysis of a 16S rDNA fragment. Aquat. Microb. Ecol. 33:217-224.
41. Lyautey, E., C. R. Jackson, J. Cayrou, J. L. Rols, and F. Garabetian. 2005. Bacterial community succession in natural river biofilm assemblages. Microb. Ecol. 50:589-601.
42. Lyautey, E., B. Lacoste, L. Ten-Hage, J. L. Rols, and F. Garabetian. 2005. Analysis of bacterial diversity in river biofilms using 16S rDNA PCR-DGGE: methodological settings and fingerprints interpretation. Water Res. 39:380- 388.
43. Lyautey, E., S. Boulêtreau, E. Y. Madigou, and F. Garabetian. 2010. Viability of differentiated epilithic bacterial communities in the River Garonne (SW France). Hydrobiologia 637:207-218.
44. Marconnet, C., C. Dagbert, M. Roy, and D. Féron. 2008. Stainless steel enoblement in freshwater: from exposure tests to mechanisms. Corros. Sci. 50:2342-2352.
45. Mollica, A., E. Traverso, and D. Thierry. 1997. On oxygen reduction depolarization induced by biofilm growth on stainless steel in sea water, p. 51-63. European Federation of Corrosion publication no. 22. The Institute of Materials, London, United Kingdom.
46. Mollica, A., and P. Cristiani. 2003. On-line biofilm monitoring by "BIOX" electrochemical probe. Water Sci. Technol. 47:45-49.
47. Moon, H., et al. 2005. On-line monitoring of low biochemical oxygen demand through continuous operation of a mediator-less microbial fuel cell. J. Microbiol. Biotechnol. 15:192-196.
48. Motoda, S., Y. Suzuki, T. Shinohara, and S. Tsujikawa. 1990. The effect of marine fouling on the ennoblement of electrode potential for stainless steels. Corros. Sci. 31:515-520.
49. Normand, P., C. Ponsonnet, X. Nesme, M. Neyra, and P. Simonet. 1996. ITS analysis of prokaryotes, p. 1-12. In D. L. Akkermans, J. D. van Elsas, and F. J. de Bruijn (ed.), Molecular microbial ecology manual. Kluwer Academic Publishers, Dordrecht, The Netherlands.
50. Parot, S., O. Nercessian, M. L. Délia, W. Achouak, and A. Bergel. 2009. Electrochemical checking of aerobic isolates from electrochemically active biofilms formed in compost. J. Appl. Microbiol. 106:1350-1359.
51. Parot, S., et al. 2011. Catalysis of the electrochemical reduction of oxygen by bacteria isolated from electro-active biofilms formed in seawater. Bioresour. Technol. 102:304-311.
52. Rabaey, K., et al. 2008. Cathodic oxygen reduction catalyzed by bacteria in microbial fuel cells. ISME J. 2:519-527.
53. Rosenbaum, M., Z. He, and L. T. Angenent. 2010. Light energy to bioelectricity: photosynthetic microbial fuel cells. Curr. Opin. Biotechnol. 21:1-6.
54. Rosenbaum, M., F. Aulenta, M. Villano, and L. T. Angenent. 2011. Cathodes as electron donor for microbial metabolism: which extracellular electron transfers are involved? Bioresour. Technol. 12:324-333.
55. Sabater, S., E. Navarro, and H. Guasch. 2002. Effects of copper on algal communities at different current velocities. J. Appl. Phycol. 14:391-398.
56. Scotto, V., R. Dicintio, and G. Marcenaro. 1985. The influence of marine aerobic microbial film on stainless-steel corrosion. Corros. Sci. 25:185-194.
57. Strik, D. P. B. T. B., H. Terlouw, H. V. M. Hamelers, and C. J. N. Buisman. 2008. Renewable sustainable biocatalyzed electricity production in a photosynthetic algal microbial fuel cell (PAMFC). Appl. Microbiol. Biotechnol. 81:659-668.
58. Strik, D. P. B. T. B., H. V. M. Hamelers, and C. J. N. Buisman. 2010. Solar energy powered microbial fuel cell with a reversible bioelectrode. Environ. Sci. Technol. 44:532-537.
59. Ter Heijne, A., D. P. B. T. B. Strik, H. V. M. Hamelers, and C. J. N. Buisman. 2010. Cathode potential and mass transfer determine performance of oxygen reducing biocathodes in microbial fuel cells. Environ. Sci. Technol. 44:7151- 7156.
60. Tian, M., et al. 2007. Direct growth of biofilms on an electrode surface and its application in electrochemical biosensoring. J. Electroanal. Chem. 611: 133-139.
61. Tison, J., et al. 2005. Typology of diatom communities and the influence of hydro-ecoregions: a study on the French hydrosystem scale. Water Res. 39:3177-3188.
62. Vandecandelaere, I., et al. 2010. Biodiversity of the cultivable fraction of a marine electroactive biofilm. Bioelectrochemistry 78:62-66.
63. Wasson, J. G., A. Chandesris, and H. Pella. 2002. Définition des hydroécorégions de France métropolitaine. Approche régionale de typologie des eaux courantes et éléments pour la définition des peuplements de référence d'invertébrés. Technical report. Cemagref Lyon BEA/LHQ, Lyon, France.
64. Wrighton, K. C., et al. 2010. Bacterial community structure corresponds to performance during cathodic nitrate reduction. ISME J. 4:1443-1455.