Genetic control and identification of QTLs associated with visual quality traits of field pea (Pisum sativum L.)

Genome

Volumn 54, Issue 4, 2011, Pages 261-272

  Ubayasena, Lasantha ^a   Bett, Kirstin ^a   Tar'An, Bunyamin ^a   Warkentin, Thomas ^a   Somers, Daryl ^a  

^a UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

amplified fragment length polymorphisms; field pea; QTL mapping; seed color; seed dimpling; seed shape; simple sequence repeats; visual quality

Indexed keywords

LATHYRUS APHACA; PISUM SATIVUM;

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM; ARTICLE; CHROMOSOME MAP; GENETICS; GENOTYPE; INBREEDING; PEA; PHENOTYPE; PHYSIOLOGY; PLANT CHROMOSOME; PLANT GENE; PLANT SEED; QUANTITATIVE TRAIT LOCUS;

AMPLIFIED FRAGMENT LENGTH POLYMORPHISM ANALYSIS; CHROMOSOME MAPPING; CHROMOSOMES, PLANT; GENES, PLANT; GENOTYPE; INBREEDING; PEAS; PHENOTYPE; QUANTITATIVE TRAIT LOCI; SEEDS;

EID: 79960992222     PISSN: 08312796     EISSN: None     Source Type: Journal    
DOI: 10.1139/g10-117     Document Type: Article

References (36)

1. Aubert G. Morin J. Jacquin F. Loridon K. Quillet M.C. Petit A. et al. 2006. Functional mapping in pea, as an aid to the candidate gene selection and for investigating synteny with the model legume Medicago truncatula. Theor. Appl. Genet. 112 (6): 1024-1041. 10.1007/s00122-005-0205-y 16416153
2. Bhattacharyya M. Martin C. Smith A. 1993. The importance of starch biosynthesis in the wrinkled seed shape character of peas studied by Mendel. Plant Mol. Biol. 22 (3): 525-531. 10.1007/BF00015981 8329688
3. Canadian Grain Commission. 2008. Official grain grading guide (1 August 2008). Canadian Grain Commission, Winnipeg, Mann. pp.343-360.
4. Cober E.R. Voldeng H.D. Fregeau-Reid J.A. 1997. Heritability of seed shape and seed size in soybean. Crop Sci. 37 (6): 1767-1769. 10.2135/cropsci1997.0011183X003700060017x (Pubitemid 28031105)
5. Domoney C. Duc G. Ellis T.H.N. Ferrándiz C. Firnhaber C. Gallardo K. et al. 2006. Genetic and genomic analysis of legume flowers and seeds. Curr. Opin. Plant Biol. 9 (2): 133-141. 10.1016/j.pbi.2006.01.014 16480914 (Pubitemid 43289307)
6. Hedley C.L. Smith C.M. Ambrose M.J. Cook S. Wang T.L. 1986. An analysis of seed development in Pisum sativum. II. The effect of the r-locus on the growth and development of the seed. Ann. Bot. (Lond.), 58 (3): 371-379.
7. Hyten D.L. Pantalone V.R. Sams C.E. Saxton A.M. Landau-Ellis D. Stefaniak T.R. Schmidt M.E. 2004. Seed quality QTL in a prominent soybean population. Theor. Appl. Genet. 109 (3): 552-561. 10.1007/s00122-004-1661-5 15221142 (Pubitemid 39138785)
8. Irzykowska L. Wolko B. Swiecicki W.K. 2001. The genetic linkage map of pea (Pisum sativum L.) based on molecular, biochemical and morphological markers. Pisum Genet. 33: 13-18.
9. Lamprecht H. 1959. The inheritance of colors of a seeds of Pisum. Agri. Hort. Genet. Landskrona, 17: 1-18.
10. Lamprecht H. 1962. Über ein neues, die Form der Pisum-Samen beeinflussendes Gen sowie ein neues Gen für Teilfarbigkeit. Agri. Hort. Genet. Landskrona, 20: 137-155.
11. Laucou V. Haurogné K. Ellis N. Rameau C. 1998. Genetic mapping in pea. 1. RAPD-based genetic linkage map of Pisum sativum. Theor. Appl. Genet. 97 (5-6): 905-915. 10.1007/s001220050971 (Pubitemid 28519386)
12. Li J. Baga M. Rossnagel B.G. Legge W.G. Chibbar R.N. 2008. Identification of quantitative trait loci for glucan concentration in barley grain. J. Cereal Sci. 48 (3): 647-655. 10.1016/j.jcs.2008.02.004
13. Loridon K. McPhee K. Morin J. Dubreuil P. Pilet-Nayel M.L. Aubert G. et al. 2005. Microsatellite marker polymorphism and mapping in pea (Pisum sativum L.). Theor. Appl. Genet. 111 (6): 1022-1031. 10.1007/s00122-005-0014-3 16133320 (Pubitemid 41435104)
14. Marcus, R.T. 1998. The measurement of color. In Color for science, art and technology. Edited by K. Nassau. Elsevier Science, Amsterdam. pp.31-96.
15. McCallum J. Timmerman-Vaughan G. Frew T. Russell A. 1997. Biochemical and genetic linkage analysis of green seed color in field pea. J. Am. Soc. Hortic. Sci. 122 (2): 218-225. (Pubitemid 27169958)
16. McCartney L. Knox J.P. 2002. Regulation of pectic polysaccharide domains in relation to cell development and cell properties in the pea testa. J. Exp. Bot. 53 (369): 707-713. 10.1093/jexbot/53.369.707 11886891 (Pubitemid 34253564)
17. McPhee, K. 2007. Pea. In Genome mapping and molecular breeding in plants. Vol. 3. Edited by C. Kole. Springer-Verlag, Berlin. pp.33-47.
18. Orf J.H. Chase K. Jarvik T. Mansur L.M. Cregan P.B. Adler F.R. Lark K.G. 1999. Genetics of soybean agronomic traits. I. Comparison of three related recombinant inbred populations. Crop Sci. 39 (6): 1642-1651. 10.2135/cropsci1999.3961642x (Pubitemid 30061419)
19. Pilet-Nayel L. Muehlbauer F.J. McGee R.J. Kraft J.M. Baranger A. Coyne C.J. 2002. Quantitative trait loci for partial resistance to Aphanomyces root rot in pea. Theor. Appl. Genet. 106 (1): 28-39. 10.1007/s00122-002-0985-2 12582868 (Pubitemid 36599685)
20. Prioul S. Frankewitz A. Deniot G. Morin G. Baranger A. 2004. Mapping of quantitative trait loci for partial resistance to Mycosphaerella pinodes in pea (Pisum sativum L.), at the seedling and adult plant stages. Theor. Appl. Genet. 108 (7): 1322-1334. 10.1007/s00122-003-1543-2 14968300 (Pubitemid 38630174)
21. Salas P. Oyarzo-Llaipen J.C. Wang D. Chase K. Mansur L. 2006. Genetic mapping of seed shape in three populations of recombinant inbred lines of soybean (Glycine max L. Merr.). Theor. Appl. Genet. 113 (8): 1459-1466. 10.1007/s00122-006-0392-1 17036219 (Pubitemid 44705025)
22. SAS Institute Inc. 1997. SAS/STAT user's guide. SAS Institute Inc., Cary, N.C., USA.
23. Smith D.L. 1973. Nucleic acid, protein and starch synthesis in developing cotyledons of Pisum arvense L. Ann. Bot. 37: 795-804.
24. Tar'an B. Warkentin T. Somers D.J. Miranda D. Vandenberg A. Blade S. et al. 2003. Quantitative trait loci for lodging resistance, plant height and partial resistance to mycosphaerella blight in field pea (Pisum sativum L.). Theor. Appl. Genet. 107 (8): 1482-1491. 10.1007/s00122-003-1379-9 12920512 (Pubitemid 37496553)
25. Tar'an B. Warkentin T. Somers D.J. Miranda D. Vandenberg A. Blade S. Bing D. 2004. Identification of quantitative trait loci for grain yield, seed protein concentration and maturity in field pea (Pisum sativum L.). Euphytica, 136 (3): 297-306. 10.1023/B:EUPH.0000032721.03075.a0 (Pubitemid 39001440)
26. Timmerman-Vaughan G.M. McCallum J.A. Frew T.J. Weeden N.F. Russell A.C. 1996. Linkage mapping of quantitative trait loci controlling seed weight in pea (Pisum sativum L.). Theor. Appl. Genet. 93 (3): 431-439. 10.1007/BF00223187 (Pubitemid 26350767)
27. Timmerman-Vaughan G.M. Frew T.J. Butler R. Murray S. Gilpin M. Falloon K. et al. 2004. Validation of quantitative trait loci for Ascochyta blight resistance in pea (Pisum sativum L.), using populations from two crosses. Theor. Appl. Genet. 109 (8): 1620-1631. 10.1007/s00122-004-1779-5 15372153 (Pubitemid 40024927)
28. Ubayasena L. Bett K. Tar'an B. Vijayan P. Warkentin T. 2010. Genetic control and QTL analysis of cotyledon bleaching resistance in green field pea (Pisum sativum L.). Genome, 53 (5): 346-359. 10.1139/G10-013 20616866
29. Valderrama M.R. Román A. Satovic Z. Rubiales D. Cubero J.I. Torres A.M. 2004. Locating quantitative trait loci associated with Orobanche crenata resistance in pea. Weed Res. 44 (4): 323-328. 10.1111/j.1365-3180.2004.00406.x (Pubitemid 39059479)
30. Van Ooijen, J.W. (Editor). 2004. MapQTL® 5, software for the mapping of quantitative traits loci in experimental populations. Kyazma B.V., Wageningen, the Netherlands.
31. Van Ooijen, J.W., and Voorips, R.E. 2004. JoinMap version 3.0, Software for the calculation of genetic linkage maps. Kyazma B.V., Wageningen, the Netherlands.
32. von Stackelberg M. Lindemann S. Menke M. Riesselmann S. Jacobsen H.J. 2003. Identification of AFLP and STS markers closely linked to the def locus in pea. Theor. Appl. Genet. 106 (7): 1293-1299. 10.1007/s00122-003-1197-0 12748781 (Pubitemid 36704429)
33. Wang T.L. Hadavizideh A. Harwood A. Welham T.J. Harwood W.A. Faulks R. Hedley C.L. 1990. An analysis of seed development in Pisum sativum. XIII. The chemical induction of storage product mutants. Plant Breed. 105 (4): 311-320. 10.1111/j.1439-0523.1990.tb01290.x
34. Warkentin T. Vandenberg A. Banniza S. Slinkard A. 2004. CDC Striker field pea. Can. J. Plant Sci. 84 (1): 239-240. 10.4141/P03-117 (Pubitemid 38600894)
35. Warkentin T. Vadenberg A. Banniza S. Slinkard A. 2005. CDC Bronco field pea. Can. J. Plant Sci. 85 (3): 649-650. 10.4141/P04-160 (Pubitemid 41717595)
36. Yan M. Liu Z. Guan C. Chen S. Yuan M. Liu X. 2009. Inheritance and molecular markers for the seed coat color in Brassica juncea. Front. Agric. China, 3 (1): 1-6. 10.1007/s11703-009-0019-9