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Volumn 49, Issue 1, 2011, Pages 48-55

A species-specific polymerase chain reaction assay for rapid and sensitive detection of Colletotrichum capsici

Author keywords

Anthracnose; Colletorichum capsici; Diagnostics; ITS sequences; Molecular detection

Indexed keywords

ANTHRACNOSE; COLLETORICHUM CAPSICI; ECONOMIC LOSS; FUNGAL GENERA; FUNGAL SPECIES; GENOMIC DNA; INTERNAL TRANSCRIBED SPACERS; ITS SEQUENCES; MOLECULAR DETECTION; PATHOGEN DETECTION; PCR ASSAY; PCR METHOD; POSTHARVEST; SENSITIVE DETECTION; SINGLE PRODUCT;

EID: 79960947585     PISSN: 10736085     EISSN: 15590305     Source Type: Journal    
DOI: 10.1007/s12033-011-9377-7     Document Type: Article
Times cited : (46)

References (34)
  • 1
    • 79960948686 scopus 로고    scopus 로고
    • Genetic diversity and host specificity of Colletotrichum species on various fruits
    • J.A. Bailey M.J. Jegar (eds). CAB International Wallingfords
    • Freeman, S. (2000). Genetic diversity and host specificity of Colletotrichum species on various fruits. In J. A. Bailey & M. J. Jegar (Eds.), Colletotrichum: Biology, pathology, control (pp. 57-77). Wallingfords: CAB International.
    • (2000) Colletotrichum: Biology, Pathology, Control , pp. 57-77
    • Freeman, S.1
  • 3
    • 0042170909 scopus 로고    scopus 로고
    • 2009 Fungal databases, Systematic Botany and Mycology Laboratory, ARS
    • Retrieved June 12
    • Farr, D.F., Rossman, A.Y., Palm, M.E., & McCray, E.B. (2009) Fungal databases, Systematic Botany and Mycology Laboratory, ARS, USDA. Retrieved June 12, 2009, from http://nt.arsgrin.gov/fungaldatabases/new-allviewgenbank.cfm? thisName=Colletotrichum%20capsici&organismtype=Fungus.
    • (2009) USDA
    • Farr, D.F.1    Rossman, A.Y.2    Palm, M.E.3    McCray, E.B.4
  • 4
    • 17644400528 scopus 로고    scopus 로고
    • Inheritance of resistance to anthracnose caused by Colletotrichum capsici in Capsicum
    • DOI 10.1111/j.1439-0523.2004.01065.x
    • P Pakdeevaraporn S Wasee PWJ Taylor O Mongkolporn 2005 Inheritance of resistance to anthracnose caused by Colletotrichum capsici in Capsicum Plant Breeding 124 206 208 10.1111/j.1439-0523.2004.01065.x (Pubitemid 40561079)
    • (2005) Plant Breeding , vol.124 , Issue.2 , pp. 206-208
    • Pakdeevaraporn, P.1    Wasee, S.2    Taylor, P.W.J.3    Mongkolporn, O.4
  • 5
    • 43749093874 scopus 로고    scopus 로고
    • Characterization and pathogenicity of Colletotrichum species associated with anthracnose on chilli (Capsicum spp.) in Thailand
    • DOI 10.1111/j.1365-3059.2007.01782.x
    • PP Than R Jeewon KD Hyde S Pongsupasamit O Mongkolporn PWJ Taylor 2008 Characterization and pathogenicity of Colletotrichum species associated with anthracnose disease on chilli (Capsicum spp.) in Thailand Plant Pathology 57 562 572 10.1111/j.1365-3059.2007.01782.x (Pubitemid 351691941)
    • (2008) Plant Pathology , vol.57 , Issue.3 , pp. 562-572
    • Than, P.P.1    Jeewon, R.2    Hyde, K.D.3    Pongsupasamit, S.4    Mongkolporn, O.5    Taylor, P.W.J.6
  • 6
    • 71649090129 scopus 로고    scopus 로고
    • Induction of defense response against Colletotrichum capsici in chili fruit by the yeast Pichia guillermondii strain R13
    • 10.1016/j.biocontrol.2009.10.011 1:CAS:528:DC%2BD1MXhsFGrt7zK
    • N Nantawanit A Chanchaichaovivat B Panijpan P Ruenwongsa 2010 Induction of defense response against Colletotrichum capsici in chili fruit by the yeast Pichia guillermondii strain R13 Biological Control 52 145 152 10.1016/j.biocontrol.2009.10.011 1:CAS:528:DC%2BD1MXhsFGrt7zK
    • (2010) Biological Control , vol.52 , pp. 145-152
    • Nantawanit, N.1    Chanchaichaovivat, A.2    Panijpan, B.3    Ruenwongsa, P.4
  • 7
    • 62349085197 scopus 로고    scopus 로고
    • PCR-based detection and characterization of the fungal pathogens Colletotrichum gloeosporioides and Colletotrichum capsici causing anthracnose in papaya (Carica papaya L.) in the Yucatan Peninsula
    • 10.1007/s12033-008-9093-0 1:CAS:528:DC%2BD1cXht1Cht7zL
    • R Tapia-Tussell A Quijano-Ramayo A Cortes-Velazquez P Lappe A Larque-Saavedra D Perez-Brito 2008 PCR-based detection and characterization of the fungal pathogens Colletotrichum gloeosporioides and Colletotrichum capsici causing anthracnose in papaya (Carica papaya L.) in the Yucatan Peninsula Molecular Biotechnology 40 293 298 10.1007/s12033-008-9093-0 1:CAS:528:DC%2BD1cXht1Cht7zL
    • (2008) Molecular Biotechnology , vol.40 , pp. 293-298
    • Tapia-Tussell, R.1    Quijano-Ramayo, A.2    Cortes-Velazquez, A.3    Lappe, P.4    Larque-Saavedra, A.5    Perez-Brito, D.6
  • 8
    • 77955624870 scopus 로고    scopus 로고
    • First report of Colletotrichum capsici causing postharvest anthracnose on papaya in South Florida
    • 10.1094/PDIS-94-8-1065B
    • TLB Tarnowski RC Ploetz 2010 First report of Colletotrichum capsici causing postharvest anthracnose on papaya in South Florida Plant Disease 94 1065 10.1094/PDIS-94-8-1065B
    • (2010) Plant Disease , vol.94 , pp. 1065
    • Tarnowski, T.L.B.1    Ploetz, R.C.2
  • 9
    • 0029158269 scopus 로고
    • Species identification and pathogenicity study of French Colletotrichum strains isolated from strawberry using morphological and cultural characteristics
    • 10.1094/Phyto-85-53
    • B Denoyes A Baudry 1995 Species identification and pathogenicity study of French Colletotrichum strains isolated from strawberry using morphological and cultural characteristics Phytopathology 85 53 57 10.1094/Phyto-85-53
    • (1995) Phytopathology , vol.85 , pp. 53-57
    • Denoyes, B.1    Baudry, A.2
  • 10
    • 0042034208 scopus 로고    scopus 로고
    • A physiological and biochemical approach to the systematics of Colletotrichum species pathogenic to strawberry
    • 10.2307/3761507
    • JAG Muñoz MB Suarez I Grondona E Monte AG Buddie PD Bridge PF Cannon 2000 A physiological and biochemical approach to the systematics of Colletotrichum species pathogenic to strawberry Mycologia 92 488 498 10.2307/3761507
    • (2000) Mycologia , vol.92 , pp. 488-498
    • Muñoz, J.A.G.1    Suarez, M.B.2    Grondona, I.3    Monte, E.4    Buddie, A.G.5    Bridge, P.D.6    Cannon, P.F.7
  • 11
    • 0030948319 scopus 로고    scopus 로고
    • Identification of Colletotrichum species responsible for anthracnose and root necrosis of strawberry in Israel
    • S Freeman T Katan 1997 Identification of Colletotrichum species responsible for anthracnose and root necrosis of strawberry in Israel Phytopathology 87 516 521 10.1094/PHYTO.1997.87.5.516 1:STN:280: DC%2BD1cjjvVCjsQ%3D%3D (Pubitemid 27195626)
    • (1997) Phytopathology , vol.87 , Issue.5 , pp. 516-521
    • Freeman, S.1    Katan, T.2
  • 12
    • 0343932732 scopus 로고    scopus 로고
    • Identification of Colletotrichum species responsible for anthracnose of strawberry based on the internal transcribed spacers of the ribosomal region
    • DOI 10.1016/S0378-1097(00)00260-3, PII S0378109700002603
    • PV Martínez-Culebras E Barrio MD García A Querol 2000 Identification of Colletotrichum species responsible for anthracnose of strawberry based on the internal transcribed spacers of the ribosomal region FEMS Microbiology Letters 189 97 101 10.1016/S0378-1097(00)00260-3 (Pubitemid 30456254)
    • (2000) FEMS Microbiology Letters , vol.189 , Issue.1 , pp. 97-101
    • Martinez-Culebras, P.V.1    Barrio, E.2    Garcia, M.D.3    Querol, A.4
  • 13
    • 7444233682 scopus 로고    scopus 로고
    • Identification and management of Colletotrichum acutatum on immature bell peppers
    • ML Lewis C Nava-Diaz S Miller 2004 Identification and management of Colletotrichum acutatum on immature Bell Peppers Plant Disease 88 1198 1204 10.1094/PDIS.2004.88.11.1198 (Pubitemid 39437980)
    • (2004) Plant Disease , vol.88 , Issue.11 , pp. 1198-1204
    • Lewis Ivey, M.L.1    Nava-Diaz, C.2    Miller, S.A.3
  • 14
    • 0030044302 scopus 로고    scopus 로고
    • Characterization of Colletotrichum gloeosporioides isolates from avocado and almond fruits with molecular and pathogenicity tests
    • S Freeman T Katan E Shabi 1996 Characterization of Colletotrichum gloeosporioides isolates from avocado and almond fruits with molecular and pathogenicity tests Applied and Environmental Microbiology 62 1014 1020 1:CAS:528:DyaK28XhsVWqsbY%3D (Pubitemid 26071474)
    • (1996) Applied and Environmental Microbiology , vol.62 , Issue.3 , pp. 1014-1020
    • Freeman, S.1    Katan, T.2    Shabi, E.3
  • 15
    • 0036111757 scopus 로고    scopus 로고
    • Activity of benomyl for control of postbloom fruit drop of citrus caused by Colletotrichum acutatum
    • NAR Peres NL Souza SE Zitko LW Timmer 2002 Activity of benomyl for control of postbloom fruit drop citrus caused by Colletotrichum acutatum Plant Disease 86 620 624 10.1094/PDIS.2002.86.6.620 1:CAS:528:DC%2BD38Xks1eks70%3D (Pubitemid 34548725)
    • (2002) Plant Disease , vol.86 , Issue.6 , pp. 620-624
    • Peres, N.A.R.1    Souza, N.L.2    Zitko, S.E.3    Timmer, L.W.4
  • 16
    • 19444378703 scopus 로고    scopus 로고
    • Morphological and molecular characterization of Colletotrichum species from herbaceous plants in Thailand
    • W Photita PWJ Taylor R Ford KD Hyde S Lumyong 2005 Morphological and molecular characterization of Colletotrichum species from herbaceous plants in Thailand Fungal Diversity 18 117 133 (Pubitemid 40722176)
    • (2005) Fungal Diversity , vol.18 , pp. 117-133
    • Photita, W.1    Taylor, P.W.J.2    Ford, R.3    Hyde, K.D.4    Lumyong, S.5
  • 17
    • 0028814175 scopus 로고
    • Differentiation of Gaeumannomyces graminis from other turf-grass fungi by amplification with primers from ribosomal internal transcribed spacers
    • 10.1111/j.1365-3059.1995.tb02791.x 1:CAS:528:DyaK2MXnvVaitb8%3D
    • PH Goodwin T Hsiang BG Xue HW Liu 1995 Differentiation of Gaeumannomyces graminis from other turf-grass fungi by amplification with primers from ribosomal internal transcribed spacers Plant Pathology 44 384 391 10.1111/j.1365-3059.1995.tb02791.x 1:CAS:528:DyaK2MXnvVaitb8%3D
    • (1995) Plant Pathology , vol.44 , pp. 384-391
    • Goodwin, P.H.1    Hsiang, T.2    Xue, B.G.3    Liu, H.W.4
  • 18
    • 11144291135 scopus 로고    scopus 로고
    • The use of real-time PCR and species-specific primers for the identification and monitoring of Paecilomyces lilacinus
    • DOI 10.1016/j.femsec.2004.09.002, PII S0168649604002570
    • SD Atkins IM Clark S Pande PR Hirsch BR Kerry 2005 The use of real-time PCR and species-specific primers for the identification and monitoring of Paecilomyces lilacinus FEMS Microbiology and Ecology 51 257 264 10.1016/j.femsec.2004.09.002 1:CAS:528:DC%2BD2cXhtFGhtrrI (Pubitemid 40038385)
    • (2005) FEMS Microbiology Ecology , vol.51 , Issue.2 , pp. 257-264
    • Atkins, S.D.1    Clark, I.M.2    Pande, S.3    Hirsch, P.R.4    Kerry, B.R.5
  • 19
    • 33846509105 scopus 로고    scopus 로고
    • Development of nested polymerase chain reaction detection of Mycosphaerella spp. and its application to the study of leaf disease in Eucalyptus plantations
    • DOI 10.1094/PHYTO-97-2-0132
    • M Glen AH Smith SRH Langrell CL Mohammed 2007 Development of nested polymerase chain reaction detection of Mycosphaerella spp. and its application to the study of leaf disease in Eucalyptus plantations Phytopathology 97 132 144 10.1094/PHYTO-97-2-0132 1:CAS:528:DC%2BD2sXitVClt7k%3D (Pubitemid 46167881)
    • (2007) Phytopathology , vol.97 , Issue.2 , pp. 132-144
    • Glen, M.1    Smith, A.H.2    Langrell, S.R.H.3    Mohammed, C.L.4
  • 20
    • 35048851019 scopus 로고    scopus 로고
    • Discrimination of Tricholoma species by species-specific ITS primers
    • DOI 10.1007/s10267-007-0368-2
    • K Kikuchi N Matsushita K Suzuki 2007 Discrimination of Tricholoma species by species-specific ITS primers Mycoscience 48 316 320 10.1007/s10267-007-0368- 2 1:CAS:528:DC%2BD2sXhsVCmtLnL (Pubitemid 47556534)
    • (2007) Mycoscience , vol.48 , Issue.5 , pp. 316-320
    • Kikuchi, K.1    Matsushita, N.2    Suzuki, K.3
  • 21
    • 0030514504 scopus 로고    scopus 로고
    • PCR-based detection of C. acutatum on strawberry
    • 10.1046/j.1365-3059.1996.d01-3.x 1:CAS:528:DyaK28XlslylsLk%3D
    • S Sreenivasaprasad K Sharada AE Brown PR Mills 1996 PCR-based detection of C. acutatum on strawberry Plant Pathology 45 650 655 10.1046/j.1365-3059. 1996.d01-3.x 1:CAS:528:DyaK28XlslylsLk%3D
    • (1996) Plant Pathology , vol.45 , pp. 650-655
    • Sreenivasaprasad, S.1    Sharada, K.2    Brown, A.E.3    Mills, P.R.4
  • 22
    • 0036270204 scopus 로고    scopus 로고
    • Detection of Colletotrichum coccodes from soil and potato tubers by conventional and quantitative real-time PCR
    • DOI 10.1046/j.1365-3059.2002.00690.x
    • DW Cullen AK Lees IK Toth JM Duncan 2002 Detection of Colletotrichum coccodes from soil and potato tubers by conventional and quantitative real-time PCR Plant Pathology 51 281 292 10.1046/j.1365-3059.2002.00690.x 1:CAS:528:DC%2BD38XlsVGqtr4%3D (Pubitemid 34623386)
    • (2002) Plant Pathology , vol.51 , Issue.3 , pp. 281-292
    • Cullen, D.W.1    Lees, A.K.2    Toth, I.K.3    Duncan, J.M.4
  • 25
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
    • M.A. Innis D.H. Gelfand J.J. Shinsky T.J. White (eds). Academic Press San Diego
    • White, T. J., Bruns, T., Lee, S., & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In M. A. Innis, D. H. Gelfand, J. J. Shinsky, & T. J. White (Eds.), PCR protocols: A guide to methods and applications (pp. 315-322). San Diego: Academic Press.
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 27
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologists programmers
    • S. Krawetz S. Misener (eds). Human Press Totowa
    • Rozen, S., & Skaletsky, H. J. (2000). Primer3 on the WWW for general users and for biologists programmers. In S. Krawetz & S. Misener (Eds.), Bioinformatics methods protocols: Methods in molecular biology (pp. 365-386). Totowa: Human Press.
    • (2000) Bioinformatics Methods Protocols: Methods in Molecular Biology , pp. 365-386
    • Rozen, S.1    Skaletsky, H.J.2
  • 28
    • 24944488169 scopus 로고    scopus 로고
    • A fast, simple, and reliable high-yielding method for DNA extraction from different plant species
    • DOI 10.1385/MB:31:2:137
    • R Tapia-Tussell A Quijano-Ramayo R Rojas-Herrera A Larque-Saavedra D Perez-Brito 2005 A fast, simple, and reliable high-yielding method for DNA extraction from different plant species Molecular Biotechnology 31 137 139 10.1385/MB:31:2:137 1:CAS:528:DC%2BD2MXhtFSrs7fE (Pubitemid 41306582)
    • (2005) Molecular Biotechnology , vol.31 , Issue.2 , pp. 137-139
    • Tapia-Tussell, R.1    Quijano-Ramayo, A.2    Rojas-Herrera, R.3    Larque-Saavedra, A.4    Perez-Brito, D.5
  • 29
    • 0036521256 scopus 로고    scopus 로고
    • Identification and Characterization of Colletotrichum spp. Affecting fruit after Harvest in Brazil
    • 10.1046/j.1439-0434.2002.00732.x 1:CAS:528:DC%2BD38XjtFaksrc%3D
    • NAR Peres EE Kuramae MSC Dias NL de Souza 2002 Identification and Characterization of Colletotrichum spp. Affecting fruit after Harvest in Brazil Journal of Phytopathology 150 128 134 10.1046/j.1439-0434.2002.00732.x 1:CAS:528:DC%2BD38XjtFaksrc%3D
    • (2002) Journal of Phytopathology , vol.150 , pp. 128-134
    • Peres, N.A.R.1    Kuramae, E.E.2    Dias, M.S.C.3    De Souza, N.L.4
  • 30
    • 33751007863 scopus 로고    scopus 로고
    • PCR-based detection and differentiation of anthracnose pathogens, Colletotrichum gloeosporioides and C. truncatum, from vegetable soybean in Taiwan
    • DOI 10.1111/j.1439-0434.2006.01163.x
    • LS Chen C Chu CD Liu RS Chen JG Tsay 2006 PCR-based detection and differentiation of Anthracnose Pathogens, Colletotrichum gloeosporioides and C. truncatum, from vegetable soybean in Taiwan Journal of Phytopathology 154 654 662 10.1111/j.1439-0434.2006.01163.x 1:CAS:528:DC%2BD2sXps1ektQ%3D%3D (Pubitemid 44744512)
    • (2006) Journal of Phytopathology , vol.154 , Issue.11-12 , pp. 654-662
    • Chen, L.S.1    Chu, C.2    Liu, C.D.3    Chen, R.S.4    Tsay, J.G.5
  • 31
    • 64949164154 scopus 로고    scopus 로고
    • Molecular detection of Colletotrichum lindemuthianum by duplex PCR
    • 10.1111/j.1439-0434.2007.01386.x 1:CAS:528:DC%2BD1cXhtVWlurbJ
    • W Wang JH Tang YC Wang 2008 Molecular detection of Colletotrichum lindemuthianum by duplex PCR Journal of Phytopathology 156 431 437 10.1111/j.1439-0434.2007.01386.x 1:CAS:528:DC%2BD1cXhtVWlurbJ
    • (2008) Journal of Phytopathology , vol.156 , pp. 431-437
    • Wang, W.1    Tang, J.H.2    Wang, Y.C.3
  • 32
    • 8744297171 scopus 로고    scopus 로고
    • Real-time detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soil
    • DOI 10.1007/s10658-004-5571-9
    • A Ippolito L Schena F Nigro VS Ligorio T Yaseen 2004 Real-time detection of Phytophthora nicotianae and P. citrophthora in citrus roots and soil European Journal of Plant Pathology 110 833 843 10.1007/s10658-004-5571-9 1:CAS:528:DC%2BD2cXpsF2mtbo%3D (Pubitemid 39520876)
    • (2004) European Journal of Plant Pathology , vol.110 , Issue.8 , pp. 833-843
    • Ippolito, A.1    Schena, L.2    Nigro, F.3    Soleti Ligorio, V.4    Yaseen, T.5
  • 33
    • 33847095855 scopus 로고    scopus 로고
    • Effects of gamma and UV-C irradiation on the postharvest control of papaya anthracnose
    • DOI 10.1016/j.postharvbio.2006.10.004, PII S0925521406002791
    • P Cia S Pascholati EA Benato EC Camili CA Santos 2007 Effects of gamma and UV-C irradiation on the postharvest control of papaya anthracnose Postharvest Biology and Technology 43 366 373 10.1016/j.postharvbio.2006.10.004 1:CAS:528:DC%2BD2sXitFyru7o%3D (Pubitemid 46283414)
    • (2007) Postharvest Biology and Technology , vol.43 , Issue.3 , pp. 366-373
    • Cia, P.1    Pascholati, S.F.2    Benato, E.A.3    Camili, E.C.4    Santos, C.A.5
  • 34
    • 77953276251 scopus 로고    scopus 로고
    • Occurrence and molecular identification of azoxystrobin-resistant Colletotrichum cereale isolates from golf course putting greens in the Southern United States
    • 10.1094/PDIS-94-6-0751 1:CAS:528:DC%2BC3cXns1Cgtrw%3D
    • JR Young M Tomaso-Peterson LP Tredway K de la Cerda 2010 Occurrence and molecular identification of azoxystrobin-resistant Colletotrichum cereale isolates from golf course putting greens in the Southern United States Plant Disease 94 751 757 10.1094/PDIS-94-6-0751 1:CAS:528:DC%2BC3cXns1Cgtrw%3D
    • (2010) Plant Disease , vol.94 , pp. 751-757
    • Young, J.R.1    Tomaso-Peterson, M.2    Tredway, L.P.3    De La Cerda, K.4


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