-
1
-
-
33645568886
-
Phylogenetic identification of lateral genetic transfer events
-
Beiko RG, Hamilton N (2006) Phylogenetic identification of lateral genetic transfer events. BMC Evol Biol 6: 15.
-
(2006)
BMC Evol Biol
, vol.6
, pp. 15
-
-
Beiko, R.G.1
Hamilton, N.2
-
2
-
-
34250757252
-
An exact nonparametric method for inferring mosaic structure in sequence triplets
-
Boni MF, Posada D, Feldman MW (2007) An exact nonparametric method for inferring mosaic structure in sequence triplets. Genetics 176: 1035-1047.
-
(2007)
Genetics
, vol.176
, pp. 1035-1047
-
-
Boni, M.F.1
Posada, D.2
Feldman, M.W.3
-
3
-
-
0027179697
-
Replication of maize streak virus mutants in maize protoplasts-evidence for a movement protein
-
Boulton MI, Pallaghy CK, Chatani M, Macfarlane S, Davies JW (1993) Replication of maize streak virus mutants in maize protoplasts-evidence for a movement protein. Virology 192: 85-93.
-
(1993)
Virology
, vol.192
, pp. 85-93
-
-
Boulton, M.I.1
Pallaghy, C.K.2
Chatani, M.3
Macfarlane, S.4
Davies, J.W.5
-
4
-
-
0036375764
-
Functions and interactions of mastrevirus gene products
-
Boulton MI (2002) Functions and interactions of mastrevirus gene products. Physiol Mol Plant Pathol 60: 243-255.
-
(2002)
Physiol Mol Plant Pathol
, vol.60
, pp. 243-255
-
-
Boulton, M.I.1
-
5
-
-
34247238154
-
HIV type 1 subtype C gag and nef diversity in southern Africa
-
Bredell H, Martin DP, van Harmelen J, Varsani A, Sheppard HW, Donovan R, Gray CM, Williamson C, Team HS (2007) HIV type 1 subtype C gag and nef diversity in southern Africa. Aids Res Hum Retrovir 23: 477-481.
-
(2007)
Aids Res Hum Retrovir
, vol.23
, pp. 477-481
-
-
Bredell, H.1
Martin, D.P.2
van Harmelen, J.3
Varsani, A.4
Sheppard, H.W.5
Donovan, R.6
Gray, C.M.7
Williamson, C.8
Team, H.S.9
-
6
-
-
77955272370
-
Turnip curly top virus, a highly divergent geminivirus infecting turnip in Iran
-
Briddon RW, Heydarnejad J, Khosrowfar F, Massumi H, Martin DP, Varsani A (2010) Turnip curly top virus, a highly divergent geminivirus infecting turnip in Iran. Virus Res 152: 169-175.
-
(2010)
Virus Res
, vol.152
, pp. 169-175
-
-
Briddon, R.W.1
Heydarnejad, J.2
Khosrowfar, F.3
Massumi, H.4
Martin, D.P.5
Varsani, A.6
-
7
-
-
77957018346
-
A novel species of mastrevirus (family Geminiviridae) isolated from Digitaria didactyla grass from Australia
-
Briddon RW, Martin DP, Owor BE, Donaldson L, Markham PG, Greber RS, Varsani A (2010) A novel species of mastrevirus (family Geminiviridae) isolated from Digitaria didactyla grass from Australia. Arch Virol 155: 1529-1534.
-
(2010)
Arch Virol
, vol.155
, pp. 1529-1534
-
-
Briddon, R.W.1
Martin, D.P.2
Owor, B.E.3
Donaldson, L.4
Markham, P.G.5
Greber, R.S.6
Varsani, A.7
-
8
-
-
0343844461
-
The two nonstructural proteins from wheat dwarf virus involved in viral gene expression and replication are retinoblastoma-binding proteins
-
Collin S, FernandezLobato M, Gooding PS, Mullineaux PM, Fenoll C (1996) The two nonstructural proteins from wheat dwarf virus involved in viral gene expression and replication are retinoblastoma-binding proteins. Virology 219: 324-329.
-
(1996)
Virology
, vol.219
, pp. 324-329
-
-
Collin, S.1
Fernandezlobato, M.2
Gooding, P.S.3
Mullineaux, P.M.4
Fenoll, C.5
-
9
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
10
-
-
69249206729
-
PCR detection and partial molecular characterization of Chickpea chlorotic dwarf virus in naturally infected sugar beet plants in Iran
-
Farzadfar SH, Pourrahim R, Golnaraghi AR, Ahoonmanesh A (2008) PCR detection and partial molecular characterization of Chickpea chlorotic dwarf virus in naturally infected sugar beet plants in Iran. J Plant Pathol 90: 247-251.
-
(2008)
J Plant Pathol
, vol.90
, pp. 247-251
-
-
Farzadfar, S.H.1
Pourrahim, R.2
Golnaraghi, A.R.3
Ahoonmanesh, A.4
-
11
-
-
0033753825
-
Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences
-
Gibbs MJ, Armstrong JS, Gibbs AJ (2000) Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences. Bioinformatics 16: 573-582.
-
(2000)
Bioinformatics
, vol.16
, pp. 573-582
-
-
Gibbs, M.J.1
Armstrong, J.S.2
Gibbs, A.J.3
-
12
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704.
-
(2003)
Syst Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
13
-
-
79551548119
-
Bromus catharticus striate mosaic virus: a new mastrevirus infecting Bromus catharticus from Australia
-
Hadfield J, Martin DP, Stainton D, Kraberger S, Owor BE, Shepherd DN, Lakay F, Markham PG, Greber RS, Briddon RW, Varsani A (2011) Bromus catharticus striate mosaic virus: a new mastrevirus infecting Bromus catharticus from Australia. Arch Virol.
-
(2011)
Arch Virol
-
-
Hadfield, J.1
Martin, D.P.2
Stainton, D.3
Kraberger, S.4
Owor, B.E.5
Shepherd, D.N.6
Lakay, F.7
Markham, P.G.8
Greber, R.S.9
Briddon, R.W.10
Varsani, A.11
-
14
-
-
34249018986
-
The complete nucleotide sequence of a mild strain of Bean yellow dwarf virus
-
Halley-Stott RP, Tanzer F, Martin DP, Rybicki EP (2007) The complete nucleotide sequence of a mild strain of Bean yellow dwarf virus. Arch Virol 152: 1237-1240.
-
(2007)
Arch Virol
, vol.152
, pp. 1237-1240
-
-
Halley-Stott, R.P.1
Tanzer, F.2
Martin, D.P.3
Rybicki, E.P.4
-
15
-
-
70849104037
-
Dating the origins of the maize-adapted strain of maize streak virus, MSV-A
-
Harkins GW, Martin DP, Duffy S, Monjane AL, Shepherd DN, Windram OP, Owor BE, Donaldson L, van Antwerpen T, Sayed RA, Flett B, Ramusi M, Rybicki EP, Peterschmitt M, Varsani A (2009) Dating the origins of the maize-adapted strain of maize streak virus, MSV-A. J Gen Virol 90: 3066-3074.
-
(2009)
J Gen Virol
, vol.90
, pp. 3066-3074
-
-
Harkins, G.W.1
Martin, D.P.2
Duffy, S.3
Monjane, A.L.4
Shepherd, D.N.5
Windram, O.P.6
Owor, B.E.7
Donaldson, L.8
van Antwerpen, T.9
Sayed, R.A.10
Flett, B.11
Ramusi, M.12
Rybicki, E.P.13
Peterschmitt, M.14
Varsani, A.15
-
16
-
-
33751253784
-
Recombination patterns in aphthoviruses mirror those found in other picornaviruses
-
Heath L, van der Walt E, Varsani A, Martin DP (2006) Recombination patterns in aphthoviruses mirror those found in other picornaviruses. J Virol 80: 11827-11832.
-
(2006)
J Virol
, vol.80
, pp. 11827-11832
-
-
Heath, L.1
van der Walt, E.2
Varsani, A.3
Martin, D.P.4
-
17
-
-
0028955414
-
Determination of the origin cleavage and joining domain of geminivirus Rep proteins
-
Heyraud-Nitschke F, Schumacher S, Laufs J, Schaefer S, Schell J, Gronenborn B (1995) Determination of the origin cleavage and joining domain of geminivirus Rep proteins. Nucleic Acids Res 23: 910-916.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 910-916
-
-
Heyraud-Nitschke, F.1
Schumacher, S.2
Laufs, J.3
Schaefer, S.4
Schell, J.5
Gronenborn, B.6
-
18
-
-
0029168171
-
Assessment of Yield Losses Caused by Chickpea Chlorotic Dwarf Geminivirus in Chickpea (Cicer-Arietinum) in India
-
Horn NM, Reddy SV, Reddy DVR (1995) Assessment of Yield Losses Caused by Chickpea Chlorotic Dwarf Geminivirus in Chickpea (Cicer-Arietinum) in India. Eur J Plant Pathol 101: 221-224.
-
(1995)
Eur J Plant Pathol
, vol.101
, pp. 221-224
-
-
Horn, N.M.1
Reddy, S.V.2
Reddy, D.V.R.3
-
19
-
-
0030027781
-
Survey of chickpea (Cicer arietinum L) for chickpea stunt disease and associated viruses in India and Pakistan
-
Horn NM, Reddy SV, van den Heuvel JFM, Reddy DVR (1996) Survey of chickpea (Cicer arietinum L) for chickpea stunt disease and associated viruses in India and Pakistan. Plant Dis 80: 286-290.
-
(1996)
Plant Dis
, vol.80
, pp. 286-290
-
-
Horn, N.M.1
Reddy, S.V.2
van den Heuvel, J.F.M.3
Reddy, D.V.R.4
-
20
-
-
0032215491
-
Prediction of functional regions of the maize streak virus replication-associated proteins by protein-protein interaction analysis
-
Horvath GV, Pettko-Szandtner A, Nikovics K, Bilgin M, Boulton M, Davies JW, Gutierrez C, Dudits D (1998) Prediction of functional regions of the maize streak virus replication-associated proteins by protein-protein interaction analysis. Plant Mol Biol 38: 699-712.
-
(1998)
Plant Mol Biol
, vol.38
, pp. 699-712
-
-
Horvath, G.V.1
Pettko-Szandtner, A.2
Nikovics, K.3
Bilgin, M.4
Boulton, M.5
Davies, J.W.6
Gutierrez, C.7
Dudits, D.8
-
21
-
-
0035503315
-
DNA forms indicate rolling circle and recombination-dependent replication of Abutilon mosaic virus
-
Jeske H, Lutgemeier M, Preiss W (2001) DNA forms indicate rolling circle and recombination-dependent replication of Abutilon mosaic virus. EMBO J 20: 6158-6167.
-
(2001)
EMBO J
, vol.20
, pp. 6158-6167
-
-
Jeske, H.1
Lutgemeier, M.2
Preiss, W.3
-
22
-
-
0029977093
-
Horseradish curly top virus is a distinct subgroup II geminivirus species with rep and C4 genes derived from a subgroup III ancestor
-
Klute KA, Nadler SA, Stenger DC (1996) Horseradish curly top virus is a distinct subgroup II geminivirus species with rep and C4 genes derived from a subgroup III ancestor. J Gen Virol 77: 1369-1378.
-
(1996)
J Gen Virol
, vol.77
, pp. 1369-1378
-
-
Klute, K.A.1
Nadler, S.A.2
Stenger, D.C.3
-
23
-
-
67349170750
-
Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses
-
Kreuze JF, Perez A, Untiveros M, Quispe D, Fuentes S, Barker I, Simon R (2009) Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses. Virology 388: 1-7.
-
(2009)
Virology
, vol.388
, pp. 1-7
-
-
Kreuze, J.F.1
Perez, A.2
Untiveros, M.3
Quispe, D.4
Fuentes, S.5
Barker, I.6
Simon, R.7
-
24
-
-
49149110923
-
Viral diseases affecting chickpea crops in Eritrea
-
Kumari SG, Makkouk KM, Loh MH, Negassi K, Tsegay S, Kidane R, Kibret A, Tesfatsion Y (2008) Viral diseases affecting chickpea crops in Eritrea. Phytopathol Mediterr 47: 42-49.
-
(2008)
Phytopathol Mediterr
, vol.47
, pp. 42-49
-
-
Kumari, S.G.1
Makkouk, K.M.2
Loh, M.H.3
Negassi, K.4
Tsegay, S.5
Kidane, R.6
Kibret, A.7
Tesfatsion, Y.8
-
25
-
-
37349086780
-
Avoidance of protein fold disruption in natural virus recombinants
-
Lefeuvre P, Lett JM, Reynaud B, Martin DP (2007) Avoidance of protein fold disruption in natural virus recombinants. PLoS Pathog 3: 1782-1789.
-
(2007)
PLoS Pathog
, vol.3
, pp. 1782-1789
-
-
Lefeuvre, P.1
Lett, J.M.2
Reynaud, B.3
Martin, D.P.4
-
26
-
-
62749122244
-
Widely conserved recombination patterns among single-stranded DNA viruses
-
Lefeuvre P, Lett JM, Varsani A, Martin DP (2009) Widely conserved recombination patterns among single-stranded DNA viruses. J Virol 83: 2697-2707.
-
(2009)
J Virol
, vol.83
, pp. 2697-2707
-
-
Lefeuvre, P.1
Lett, J.M.2
Varsani, A.3
Martin, D.P.4
-
27
-
-
78449252566
-
The spread of tomato yellow leaf curl virus from the Middle East to the World
-
Lefeuvre P, Martin DP, Harkins G, Lemey P, Gray AJA, Meredith S, Lakay F, Monjane A, Lett JM, Varsani A, Heydarnejad J (2010) The spread of tomato yellow leaf curl virus from the Middle East to the World. PLoS Pathog 6: e1001164.
-
(2010)
PLoS Pathog
, vol.6
-
-
Lefeuvre, P.1
Martin, D.P.2
Harkins, G.3
Lemey, P.4
Gray, A.J.A.5
Meredith, S.6
Lakay, F.7
Monjane, A.8
Lett, J.M.9
Varsani, A.10
Heydarnejad, J.11
-
28
-
-
65949117838
-
Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning
-
Lemey P, Lott M, Martin DP, Moulton V (2009) Identifying recombinants in human and primate immunodeficiency virus sequence alignments using quartet scanning. BMC Bioinformatics 10: 126.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 126
-
-
Lemey, P.1
Lott, M.2
Martin, D.P.3
Moulton, V.4
-
29
-
-
0030764128
-
Molecular characterization of a subgroup I geminivirus from a legume in South Africa
-
Liu L, van Tonder T, Pietersen G, Davies JW, Stanley J (1997) Molecular characterization of a subgroup I geminivirus from a legume in South Africa. J Gen Virol 78: 2113-2117.
-
(1997)
J Gen Virol
, vol.78
, pp. 2113-2117
-
-
Liu, L.1
van Tonder, T.2
Pietersen, G.3
Davies, J.W.4
Stanley, J.5
-
30
-
-
0031669168
-
Mutational analysis of bean yellow dwarf virus, a geminivirus of the genus Mastrevirus that is adapted to dicotyledonous plants
-
Liu L, Davies JW, Stanley J (1998) Mutational analysis of bean yellow dwarf virus, a geminivirus of the genus Mastrevirus that is adapted to dicotyledonous plants. J Gen Virol 79: 2265-2274.
-
(1998)
J Gen Virol
, vol.79
, pp. 2265-2274
-
-
Liu, L.1
Davies, J.W.2
Stanley, J.3
-
31
-
-
0032970122
-
Adaptation of the geminivirus bean yellow dwarf virus to dicotyledonous hosts involves both virion-sense and complementary-sense genes
-
Liu L, Pinner MS, Davies JW, Stanley J (1999) Adaptation of the geminivirus bean yellow dwarf virus to dicotyledonous hosts involves both virion-sense and complementary-sense genes. J Gen Virol 80: 501-506.
-
(1999)
J Gen Virol
, vol.80
, pp. 501-506
-
-
Liu, L.1
Pinner, M.S.2
Davies, J.W.3
Stanley, J.4
-
34
-
-
0037354987
-
Identification and seasonal variation of viral diseases of chickpea and lentil in Iran
-
Makkouk KM, Kumari SG, Shahraeen N, Fazlali Y, Farzadfar S, Ghotbi T, Mansouri AR (2003) Identification and seasonal variation of viral diseases of chickpea and lentil in Iran. Zeitschrift Fur Pflanzenkrankheiten Und Pflanzenschutz J Plant Dis Protect 110: 157-169.
-
(2003)
Zeitschrift Fur Pflanzenkrankheiten Und Pflanzenschutz J Plant Dis Protect
, vol.110
, pp. 157-169
-
-
Makkouk, K.M.1
Kumari, S.G.2
Shahraeen, N.3
Fazlali, Y.4
Farzadfar, S.5
Ghotbi, T.6
Mansouri, A.R.7
-
35
-
-
0033824415
-
RDP: detection of recombination amongst aligned sequences
-
Martin D, Rybicki E (2000) RDP: detection of recombination amongst aligned sequences. Bioinformatics 16: 562-563.
-
(2000)
Bioinformatics
, vol.16
, pp. 562-563
-
-
Martin, D.1
Rybicki, E.2
-
36
-
-
0036392284
-
Investigation of Maize streak virus pathogenicity determinants using chimaeric genomes
-
Martin DP, Rybicki EP (2002) Investigation of Maize streak virus pathogenicity determinants using chimaeric genomes. Virology 300: 180-188.
-
(2002)
Virology
, vol.300
, pp. 180-188
-
-
Martin, D.P.1
Rybicki, E.P.2
-
37
-
-
13144283628
-
A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints
-
Martin DP, Posada D, Crandall KA, Williamson C (2005) A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. Aids Res Hum Retrovir 21: 98-102.
-
(2005)
Aids Res Hum Retrovir
, vol.21
, pp. 98-102
-
-
Martin, D.P.1
Posada, D.2
Crandall, K.A.3
Williamson, C.4
-
38
-
-
13444251528
-
RDP2: recombination detection and analysis from sequence alignments
-
Martin DP, Williamson C, Posada D (2005) RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21: 260-262.
-
(2005)
Bioinformatics
, vol.21
, pp. 260-262
-
-
Martin, D.P.1
Williamson, C.2
Posada, D.3
-
39
-
-
77957243284
-
RDP3: a flexible and fast computer program for analyzing recombination
-
Martin DP, Lemey P, Lott M, Moulton V, Posada D, Lefeuvre P (2010) RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 26: 2462-2463.
-
(2010)
Bioinformatics
, vol.26
, pp. 2462-2463
-
-
Martin, D.P.1
Lemey, P.2
Lott, M.3
Moulton, V.4
Posada, D.5
Lefeuvre, P.6
-
40
-
-
0026604322
-
The nucleotide-sequence of the infectious cloned DNA component of tobacco yellow dwarf virus reveals features of geminiviruses infecting monocotyledonous plants
-
Morris BAM, Richardson KA, Haley A, Zhan XC, Thomas JE (1992) The nucleotide-sequence of the infectious cloned DNA component of tobacco yellow dwarf virus reveals features of geminiviruses infecting monocotyledonous plants. Virology 187: 633-642.
-
(1992)
Virology
, vol.187
, pp. 633-642
-
-
Morris, B.A.M.1
Richardson, K.A.2
Haley, A.3
Zhan, X.C.4
Thomas, J.E.5
-
41
-
-
47549101578
-
Two dicot-infecting mastreviruses (family Geminiviridae) occur in Pakistan
-
Nahid N, Amin I, Mansoor S, Rybicki EP, van der Walt E, Briddon RW (2008) Two dicot-infecting mastreviruses (family Geminiviridae) occur in Pakistan. Arch Virol 153: 1441-1451.
-
(2008)
Arch Virol
, vol.153
, pp. 1441-1451
-
-
Nahid, N.1
Amin, I.2
Mansoor, S.3
Rybicki, E.P.4
van der Walt, E.5
Briddon, R.W.6
-
42
-
-
36248958745
-
Genetic analysis of maize streak virus isolates from Uganda reveals widespread distribution of a recombinant variant
-
Owor BE, Martin DP, Shepherd DN, Edema R, Monjane AL, Rybicki EP, Thomson JA, Varsani A (2007) Genetic analysis of maize streak virus isolates from Uganda reveals widespread distribution of a recombinant variant. J Gen Virol 88: 3154-3165.
-
(2007)
J Gen Virol
, vol.88
, pp. 3154-3165
-
-
Owor, B.E.1
Martin, D.P.2
Shepherd, D.N.3
Edema, R.4
Monjane, A.L.5
Rybicki, E.P.6
Thomson, J.A.7
Varsani, A.8
-
43
-
-
0033590220
-
Possible emergence of new geminiviruses by frequent recombination
-
Padidam M, Sawyer S, Fauquet CM (1999) Possible emergence of new geminiviruses by frequent recombination. Virology 265: 218-225.
-
(1999)
Virology
, vol.265
, pp. 218-225
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
44
-
-
0035115583
-
Recombination, pseudorecombination and synergism of geminiviruses are determinant keys to the epidemic of severe cassava mosaic disease in Uganda
-
Pita JS, Fondong VN, Sangare A, Otim-Nape GW, Ogwal S, Fauquet CM (2001) Recombination, pseudorecombination and synergism of geminiviruses are determinant keys to the epidemic of severe cassava mosaic disease in Uganda. J Gen Virol 82: 655-665.
-
(2001)
J Gen Virol
, vol.82
, pp. 655-665
-
-
Pita, J.S.1
Fondong, V.N.2
Sangare, A.3
Otim-Nape, G.W.4
Ogwal, S.5
Fauquet, C.M.6
-
45
-
-
0035923699
-
Evaluation of methods for detecting recombination from DNA sequences: computer simulations
-
Posada D, Crandall KA (2001) Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natil Acad Sci USA 98: 13757-13762.
-
(2001)
Proc Natil Acad Sci USA
, vol.98
, pp. 13757-13762
-
-
Posada, D.1
Crandall, K.A.2
-
46
-
-
52149123356
-
Sequence analyses of Wheat dwarf virus isolates from different hosts reveal low genetic diversity within the wheat strain
-
Ramsell JNE, Lemmetty A, Jonasson J, Andersson A, Sigvald R, Kvarnheden A (2008) Sequence analyses of Wheat dwarf virus isolates from different hosts reveal low genetic diversity within the wheat strain. Plant Pathol 57: 834-841.
-
(2008)
Plant Pathol
, vol.57
, pp. 834-841
-
-
Ramsell, J.N.E.1
Lemmetty, A.2
Jonasson, J.3
Andersson, A.4
Sigvald, R.5
Kvarnheden, A.6
-
47
-
-
0024617448
-
Wheat dwarf virus, a geminivirus of graminaceous plants needs splicing for replication
-
Schalk HJ, Matzeit V, Schiller B, Schell J, Gronenborn B (1989) Wheat dwarf virus, a geminivirus of graminaceous plants needs splicing for replication. EMBO J 8: 359-364.
-
(1989)
EMBO J
, vol.8
, pp. 359-364
-
-
Schalk, H.J.1
Matzeit, V.2
Schiller, B.3
Schell, J.4
Gronenborn, B.5
-
48
-
-
77957737904
-
Mastreviruses in chickpea (Cicer arietinum) and other dicotyledonous crops and weeds in Queensland and northern New South Wales, Australia
-
Schwinghamer MW, Thomas JE, Schilg MA, Parry JN, Dann EK, Moore KJ, Kumari SG (2010) Mastreviruses in chickpea (Cicer arietinum) and other dicotyledonous crops and weeds in Queensland and northern New South Wales, Australia. Australas Plant Pathol 39: 551-561.
-
(2010)
Australas Plant Pathol
, vol.39
, pp. 551-561
-
-
Schwinghamer, M.W.1
Thomas, J.E.2
Schilg, M.A.3
Parry, J.N.4
Dann, E.K.5
Moore, K.J.6
Kumari, S.G.7
-
49
-
-
14744305454
-
A three-nucleotide mutation altering the Maize streak virus Rep pRBR-interaction motif reduces symptom severity in maize and partially reverts at high frequency without restoring pRBR-Rep binding
-
Shepherd DN, Martin DP, McGivern DR, Boulton MI, Thomson JA, Rybicki EP (2005) A three-nucleotide mutation altering the Maize streak virus Rep pRBR-interaction motif reduces symptom severity in maize and partially reverts at high frequency without restoring pRBR-Rep binding. J Gen Virol 86: 803-813.
-
(2005)
J Gen Virol
, vol.86
, pp. 803-813
-
-
Shepherd, D.N.1
Martin, D.P.2
McGivern, D.R.3
Boulton, M.I.4
Thomson, J.A.5
Rybicki, E.P.6
-
50
-
-
0026708873
-
Analyzing the mosaic structure of genes
-
Smith JM (1992) Analyzing the mosaic structure of genes. J Mol Evol 34: 126-129.
-
(1992)
J Mol Evol
, vol.34
, pp. 126-129
-
-
Smith, J.M.1
-
51
-
-
78149409246
-
Two novel mastreviruses from chickpea (Cicer arietinum) in Australia
-
Thomas JE, Parry JN, Schwinghamer MW, Dann EK (2010) Two novel mastreviruses from chickpea (Cicer arietinum) in Australia. Arch Virol 155: 1777-1788.
-
(2010)
Arch Virol
, vol.155
, pp. 1777-1788
-
-
Thomas, J.E.1
Parry, J.N.2
Schwinghamer, M.W.3
Dann, E.K.4
-
52
-
-
63449133264
-
Rapid host adaptation by extensive recombination
-
van der Walt E, Rybicki EP, Varsani A, Polston JE, Billharz R, Donaldson L, Monjane AL, Martin DP (2009) Rapid host adaptation by extensive recombination. J Gen Virol 90: 734-746.
-
(2009)
J Gen Virol
, vol.90
, pp. 734-746
-
-
van der Walt, E.1
Rybicki, E.P.2
Varsani, A.3
Polston, J.E.4
Billharz, R.5
Donaldson, L.6
Monjane, A.L.7
Martin, D.P.8
-
53
-
-
39749103598
-
Panicum streak virus diversity is similar to that observed for maize streak virus
-
Varsani A, Oluwafemi S, Windram OP, Shepherd DN, Monjane AL, Owor BE, Rybicki EP, Lefeuvre P, Martin DP (2008) Panicum streak virus diversity is similar to that observed for maize streak virus. Arch Virol 153: 601-604.
-
(2008)
Arch Virol
, vol.153
, pp. 601-604
-
-
Varsani, A.1
Oluwafemi, S.2
Windram, O.P.3
Shepherd, D.N.4
Monjane, A.L.5
Owor, B.E.6
Rybicki, E.P.7
Lefeuvre, P.8
Martin, D.P.9
-
54
-
-
52649089553
-
Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen
-
Varsani A, Shepherd DN, Monjane AL, Owor BE, Erdmann JB, Rybicki EP, Peterschmitt M, Briddon RW, Markham PG, Oluwafemi S, Windram OP, Lefeuvre P, Lett JM, Martin DP (2008) Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen. J Gen Virol 89: 2063-2074.
-
(2008)
J Gen Virol
, vol.89
, pp. 2063-2074
-
-
Varsani, A.1
Shepherd, D.N.2
Monjane, A.L.3
Owor, B.E.4
Erdmann, J.B.5
Rybicki, E.P.6
Peterschmitt, M.7
Briddon, R.W.8
Markham, P.G.9
Oluwafemi, S.10
Windram, O.P.11
Lefeuvre, P.12
Lett, J.M.13
Martin, D.P.14
-
55
-
-
72849108570
-
Comparative analysis of Panicum streak virus and Maize streak virus diversity, recombination patterns and phylogeography
-
Varsani A, Monjane AL, Donaldson L, Oluwafemi S, Zinga I, Komba EK, Plakoutene D, Mandakombo N, Mboukoulida J, Semballa S, Briddon RW, Markham PG, Lett JM, Lefeuvre P, Rybicki EP, Martin DP (2009) Comparative analysis of Panicum streak virus and Maize streak virus diversity, recombination patterns and phylogeography. Virol J 6: 194.
-
(2009)
Virol J
, vol.6
, pp. 194
-
-
Varsani, A.1
Monjane, A.L.2
Donaldson, L.3
Oluwafemi, S.4
Zinga, I.5
Komba, E.K.6
Plakoutene, D.7
Mandakombo, N.8
Mboukoulida, J.9
Semballa, S.10
Briddon, R.W.11
Markham, P.G.12
Lett, J.M.13
Lefeuvre, P.14
Rybicki, E.P.15
Martin, D.P.16
-
56
-
-
64249105731
-
A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family
-
Varsani A, Shepherd DN, Dent K, Monjane AL, Rybicki EP, Martin DP (2009) A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family. Virol J 6: 36.
-
(2009)
Virol J
, vol.6
, pp. 36
-
-
Varsani, A.1
Shepherd, D.N.2
Dent, K.3
Monjane, A.L.4
Rybicki, E.P.5
Martin, D.P.6
-
57
-
-
0031892518
-
Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences
-
Weiller GF (1998) Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences. Mol Biol Evol 15: 326-335.
-
(1998)
Mol Biol Evol
, vol.15
, pp. 326-335
-
-
Weiller, G.F.1
-
58
-
-
0029124903
-
Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus-requirement for efficient viral-DNA replication
-
Xie Q, Suarezlopez P, Gutierrez C (1995) Identification and analysis of a retinoblastoma binding motif in the replication protein of a plant DNA virus-requirement for efficient viral-DNA replication. EMBO J 14: 4073-4082.
-
(1995)
EMBO J
, vol.14
, pp. 4073-4082
-
-
Xie, Q.1
Suarezlopez, P.2
Gutierrez, C.3
-
59
-
-
0030862753
-
Evidence that DNA-A of a geminivirus associated with severe cassava mosaic disease in Uganda has arisen by interspecific recombination
-
Zhou XP, Liu YL, Calvert L, Munoz C, OtimNape GW, Robinson DJ, Harrison BD (1997) Evidence that DNA-A of a geminivirus associated with severe cassava mosaic disease in Uganda has arisen by interspecific recombination. J Gen Virol 78: 2101-2111.
-
(1997)
J Gen Virol
, vol.78
, pp. 2101-2111
-
-
Zhou, X.P.1
Liu, Y.L.2
Calvert, L.3
Munoz, C.4
Otimnape, G.W.5
Robinson, D.J.6
Harrison, B.D.7
|