Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies

Genomics

Volumn 98, Issue 2, 2011, Pages 152-153

  Kong, Yong ^a  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

Adapters trimming; Approximate string matching; Barcode assignment; Bit vector algorithm; Next generation sequencing

Indexed keywords

ARTICLE; BIOTECHNOLOGY; COMPUTER PROGRAM; DNA BARCODING; DNA FOOTPRINTING; GENETIC ALGORITHM; HIGH THROUGHPUT SEQUENCING; INTERNET; MUSCLE STRENGTH; PRIORITY JOURNAL; RELIABILITY; SEQUENCE ANALYSIS;

ALGORITHMS; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 79960698975     PISSN: 08887543     EISSN: 10898646     Source Type: Journal    
DOI: 10.1016/j.ygeno.2011.05.009     Document Type: Article

References (1)

1. Myers G. A fast bit-vector algorithm for approximate string matching based on dynamic programming. J. ACM 1999, 46:395-415.