Genetic structure in fragmented populations of Hippophae rhamnoides ssp. sinensis in China investigated by ISSR and cpSSR markers

Plant Systematics and Evolution

Volumn 295, Issue 1, 2011, Pages 97-107

  Wang, Yuhua ^a   Jiang, Hao ^a   Peng, Shuming ^a   Korpelainen, Helena ^b  

^a CHENGDU INSTITUTE OF BIOLOGY   (China)

^b UNIVERSITY OF HELSINKI   (Finland)

Author keywords

cpSSR; Genetic variation; Habitat fragmentation; Hippophae rhamnoides ssp. sinensis; ISSR

Indexed keywords

HIPPOPHAE RHAMNOIDES;

EID: 79960608844     PISSN: 03782697     EISSN: 16156110     Source Type: Journal    
DOI: 10.1007/s00606-011-0466-7     Document Type: Article

References (56)

1. Aitzetmuller K, Xin Y (1999) Sea buckthorn and sea buckthorn oils-recent developments in China and central Asia. Nahrung 43: 228-232.
2. Avdeyev VI (1983) Novaya taksonomiya roda oblepikha: Hippophae L. Izv. Akad. Nauk. Tadzh. SSR. Biol. Nauk. 4: 11-17.
3. Bartish IV, Jeppsson N, Nybom H (1999) Population genetic structure in the dioecious pioneer plant species Hippophae rhamnoides investigated by random amplified polymorphic DNA (RAPD) markers. Mol Ecol 8: 791-802.
4. Bartish IV, Jeppsson N, Bartish GI, Lu R, Nybom H (2000) Inter- and intraspecific genetic variation in Hippophae (Elaeagnaceae) investigated by RAPD markers. Plant Syst Evol 225: 85-101.
5. Bartish IV, Jeppsson N, Nybom H, Swenson U (2002) Phylogeny of Hippophae (Elaeagnaceae) inferred from parsimony analysis of chloroplast DNA and morphology. Syst Bot 27: 41-54.
6. Bryan GJ, McNicoll J, Ramsay G, Meyer RC, De Jong WS (1999) Polymorphic simple sequence repeat markers in chloroplast genomes of Solanaceous plants. Theor Appl Genet 99: 859-867.
7. Chen G, Wang Y, Zhao C, Korpelainen H, Li C (2008) Genetic diversity of Hippophae rhamnoides populations at varying altitudes in the Wolong Natural Reserve of China as revealed by ISSR markers. Silvae Genet 57: 29-36.
8. Chen W, Su X, Zhang H, Sun K, Ma RJ, Chen XL (2010) High genetic differentiation of Hippophae rhamnoides ssp. yunnanensis (Elaeagnaceae), a plant endemic to the Qinghai-Tibet Plateau. Biochem Genet 48: 565-576.
9. Cheng YJ, Meng HJ, Guo WW, Deng XX (2006) Universal chloroplast primer pairs for simple sequence repeat analysis in diverse genera of fruit crops. J Hortic Sci Biotechnol 81: 132-138.
10. Excoffier L, Guillaume L, Schneider S (2007) ARLEQUIN (version 3. 11): an integrated software package for population genetics data analysis. Computational and Molecular Population Genetics Lab (CMPG). Zoological Institute, University of Berne, Switzerland.
11. Frankham R (1996) Relationship of genetic variation to population size in wildlife. Conserv Biol 10: 1500-1508.
12. Hartl DL, Clark AG (1989) Principles of population genetics. Sinauer, Sunderland.
13. Heuertz M, Vekemans X, Hausman JF, Palada M, Hardy OJ (2003) Estimating seed vs. pollen dispersal from spatial genetic structure in the common ash. Mol Ecol 12: 2483-2495.
14. Huff DR, Peakall R, Smouse PE (1993) RAPD variation within and among natural populations of outcrossing buffalo grass Buchloe dactyloides (Nutt) Engelm. Theor Appl Genet 86: 927-934.
15. Isagi Y, Tateno R, Matsuki Y, Hirao A, Watanabe S, Shibata M (2007) Genetic and reproductive consequences of forest fragmentation for populations of Magnolia obovata. Ecol Res 22: 382-389.
16. Jump AS, Penuelas J (2006) Genetic effects of chronic habitat fragmentation in a wind-pollinated tree. Proc Natl Acad Sci USA 103: 8096-8100.
17. Kettle CJ, Hollingsworth PM, Jaffre T, Moran B, Ennos RA (2007) Identifying the early genetic consequences of habitat degradation in a highly threatened tropical conifer, Araucaria nemorosa Laubenfels. Mol Ecol 16: 3581-3591.
18. Li C, Xu G, Zang R, Korpelainen H, Berninger F (2007) Sex-related differences in leaf morphological and physiological responses in Hippophae rhamnoides along an altitudinal gradient. Tree Physiol 27: 399-406.
19. Lian YS (1988) New discoveries of the genus Hippophae L. (Elaeagnaceae). Acta Phytotax Sin 26: 235-237 in Chinese.
20. Lian YS, Chen XL (1992) The ecogeographical distribution of Hippophae rhamnoides subsp. sinensis and its phytogeographical significance. Acta Phytotax Sin 30: 349-355 in Chinese.
21. Lian YS, Chen XL (1996) The systematic classification of the genus Hippophae. Hippophae 9: 15-24.
22. Lian YS, Chen XL, Wang F (1997) New discoveries of the genus Hippophae L. II. In: Lu S, Li M, Hu J, Liu S (eds) Worldwide research and development of sea buckthorn. China Science and Technology Press, Beijing, pp 60-65.
23. Lian Y, Chen X, Lian H (1998) Systematic classification of the genus Hippophae L. Seabuckthorn Res 1: 13-23.
24. Lian YS, Lu SG, Xue SK, Chen XL (2000) Biology and chemistry of the genus Hippophae. Gansu Science and Technology Press, Lanzhou, pp 1-226 (in Chinese).
25. Liu SW, He TN (1978) The genus Hippophae from Qing-Zang plateau. Acta Phytotax Sin 16: 106-108 (in Chinese).
26. Lu R (1992) Sea buckthorn-a multipurpose plant species for fragile mountains. ICIMOD Occasional Paper No. 20. Kathmandu, Nepal.
27. Lu R (1997) Eco-geographical distribution of sea buckthorn and prospects of International cooperation. In: Lu S, Li M, Hu J, Liu S (eds) Worldwide research and development of sea buckthorn. China Science and Technology Press, Beijing, pp 123-129.
28. Lu XW, Sun K, Ma RJ, Zhang H, Su X, Wang ML (2006) Fruits foraging patterns and seed dispersal effect of frugivorous birds on Hippophae rhamnoides sinensis. Front Biol China 3: 318-322.
29. Lu Z, Wang Y, Zhang X, Korpelainen H, Li C (2009) Genetic variation of isolated Picea balfouriana populations from the southeast of the Qinghai-Tibet Plateau. Ann For Sci 66: 607 (p1-10).
30. Mantel N (1967) The detection of disease clustering and a generalized regression approach. Cancer Res 27: 209-220.
31. Miller M (2000) TFPGA (version 1. 3): tools for population genetic analysis, a windows program for the analysis of allozyme and molecular population genetic data. Department of Biological Sciences, Northern Arizona University.
32. Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.
33. Nei M (1987) Molecular evolutionary genetics. Columbia University Press, New York.
34. O'Connell LM, Mosseler A, Rajora OP (2006) Impacts of forest fragmentation on the mating system and genetic diversity of white spruce (Picea glauca) at the landscape level. Heredity 97: 418-426.
35. Peakall R, Smouse PE (2006) GENALEX 6: Genetic Analysis in Excel. Population genetic software for teaching and research. Australian National University, Canberra.
36. Peakall R, Smouse PE, Huff DR (1995) Evolutionary implications of allozyme and RAPD variation in diploid populations of dioecious buffalograss Buchloe dactyloides. Mol Ecol 4: 135-147.
37. Rousi A (1965) Observations on the cytology and variation of European and Asiatic populations of Hippophaerhamnoides. Ann Bot Fennici 2: 1-18.
38. Rousi A (1971) The genus Hippophae L. A taxonomic study. Ann Bot Fennici 8: 177-227.
39. Ruan CJ, Li DQ (2002) Analysis on the community characteristics of Hippophae rhamnoides L. plantation and water and nutrition of woodland in Loess Hilly Region. J Appl Ecol 13: 1061-1064 (in Chinese).
40. Servettaz C (1909) Monographie des Eleagnacees. Beih Bot Centralbl 25: 1-40.
41. Sheng HM, An LZ, Chen T, Xu SJ, Liu GX, Zheng XL, Pu LL, Liu YJ, Lian YS (2006) Analysis of the genetic diversity and relationships among and within species of Hippophae (Elaeagnaceae) based on RAPD markers. Plant Syst Evol 260: 25-37.
42. Sun K, Chen X, Ma R, Li C, Wang Q, Ge S (2002) Molecular phylogenetics of Hippophae L. (Elaeagnaceae) based on the internal transcribed spacer (ITS) sequences of nrDNA. Plant Syst Evol 235: 121-134.
43. Sun K, Chen W, Ma RJ, Chen XL, Li A, Ge S (2006) Genetic variation in Hippophae rhamnoides ssp. sinensis (Elaeagnaceae) revealed by RAPD markers. Biochem Genet 44: 186-197.
44. Swenson U, Bartish IV (2003) Taxonomic synopsis of Hippophae (Elaeagnaceae). Nordic J Bot 22: 369-374.
45. Tang X, Tigerstedt PMA (2001) Variation of physical and chemical characters within an elite sea buckthorn (Hippophae rhamnoides L.) breeding population. Sci Horitic 88: 203-214.
46. Tian LC, Guan FL, Zhang MY (1993) The preliminary study of flowering features in Hippophae rhamnoides L. ssp. sinensis Rousi and artificial hybridization. Hippophae 6: 29-33.
47. Tian C, Lei Y, Shi S, Nan P, Chen J, Zhong Y (2004a) Genetic diversity of sea buckthorn (Hippophae rhamnoides) populations in northeastern and northwestern China as revealed by ISSR markers. New For 27: 229-237.
48. Tian C, Nan P, Shi S, Chen J, Zhong Y (2004b) Molecular genetic variation in Chinese populations of three subspecies of Hippophae rhamnoides. Biochem Genet 42: 259-267.
49. Wang ZK, Guo BP, Yan LY (1989) Study on features of pollen dispersal of sea buckthorn in mountains. In: Proceedings of International Symposium on Sea Buckthorn, Beijing, pp 186-189.
50. Weising K, Gardner RC (1999) A set of conserved PCR primers for the analysis of simple sequence repeat polymorphisms in chloroplast genomes of dicotyledonous angiosperms. Genome 42: 9-19.
51. Wright S (1969) Evolution and genetics of populations, vol 2. The theory of gene frequencies. University of Chicago Press, Chicago.
52. Wright S (1978) Evolution and genetics of populations, vol 4. Variability within and among populations. University of Chicago Press, Chicago.
53. Yang Y, Yao Y, He H (2008) Influence of ambient and enhanced ultraviolet-B radiation on the plant growth and physiological properties in two contrasting populations of Hippophae rhamnoides. J Plant Res 121: 377-385.
54. Yao Y, Tigerstedt PMA (1993) Isozyme studies of genetic diversity and evolution in Hippophae. Genet Resour Crop Evol 40: 153-164.
55. Yeh FC, Yang RC, Boyle T (1997) POPGENE (version 1. 32): software Microsoft Windows-based freeware for population genetic analysis. University of Alberta, Canada.
56. Zhao H, Zhu C, Gao C, Li H, Liu Z, Sun W (1991) Geographical variation of fruit traits of the Chinese sea buckthorn and selection of provenances for fruit use. Hippophae 4: 15-18.