Direct detection of highly pathogenic avian influenza A/H5N1 virus from mud specimens

Journal of Virological Methods

Volumn 176, Issue 1-2, 2011, Pages 69-73

  Horm, Srey Viseth ^a   Deboosere, Nathalie ^b   Gutiérrez, Ramona A ^a   Vialette, Michèle ^b   Buchy, Philippe ^a  

^a INSTITUT PASTEUR DU CAMBODGE   (Cambodia)

^b INSTITUT PASTEUR DE LILLE   (France)

Author keywords

Environment; H5N1 virus; Influenza; Mud; Virus detection

Indexed keywords

MACROGOL; REAGENT; TRIZOL REAGENT; UNCLASSIFIED DRUG; VIRUS RNA;

ANALYTIC METHOD; ARTICLE; CONTROLLED STUDY; ELUTION; INFLUENZA VIRUS A H5N1; INTERMETHOD COMPARISON; MUD; NONHUMAN; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; RNA EXTRACTION; SOIL AND SOIL RELATED PHENOMENA; VIRAL CONTAMINATION; VIRUS DETECTION; VIRUS PARTICLE;

ANIMALS; CHICK EMBRYO; GEOLOGIC SEDIMENTS; HUMANS; INFLUENZA A VIRUS, H5N1 SUBTYPE; INFLUENZA IN BIRDS; INFLUENZA, HUMAN; POULTRY; POULTRY DISEASES; REAGENT KITS, DIAGNOSTIC; RNA, VIRAL;

AVES; INFLUENZA A VIRUS;

EID: 79960593594     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2011.06.002     Document Type: Article

References (16)

1. Breban R., Drake J.M., Stallknecht D.E., Rohani P. The role of environmental transmission in recurrent avian influenza epidemics. PLoS Comput. Biol. 2009, 5:e1000346.
2. Brown J.D., Swayne D.E., Cooper R.J., Burns R.E., Stallknecht D.E. Persistence of H5 and H7 avian influenza viruses in water. Avian Dis. 2007, 51:285-289.
3. Chen J., Yang Z., Chen Q., Liu X., Fang F., Chang H., Li D., Chen Z. Characterization of H5N1 influenza A viruses isolated from domestic green-winged teal. Virus Genes 2009, 38:66-73.
4. Dovas C.I., Papanastassopoulou M., Georgiadis M.P., Chatzinasiou E., Maliogka V.I., Georgiades G.K. Detection and quantification of infectious avian influenza A (H5N1) virus in environmental water by using real-time reverse transcription-PCR. Appl. Environ. Microbiol. 2010, 76:2165-2174.
5. Forster J.L., Harkin V.B., Graham D.A., McCullough S.J. The effect of sample type, temperature and RNA later on the stability of avian influenza virus RNA. J. Virol. Methods 2008, 149:190-194.
6. Ito T., Okazaki K., Kawaoka Y., Takada A., Webster R.G., Kida H. Perpetuation of influenza A viruses in Alaskan waterfowl reservoirs. Arch. Virol. 1995, 140:1163-1172.
7. Khalenkov A., Laver W.G., Webster R.G. Detection and isolation of H5N1 influenza virus from large volumes of natural water. J. Virol. Methods 2008, 149:180-183.
8. Kuiken T., Holmes E.C., McCauley J., Rimmelzwaan G.F., Williams C.S., Grenfell B.T. Host species barriers to influenza virus infections. Science 2006, 312:394-397.
9. Lang A.S., Kelly A., Runstadler J.A. Prevalence and diversity of avian influenza viruses in environmental reservoirs. J. Gen. Virol. 2008, 89:509-519.
10. Pannwitz G., Wolf C., Harder T. Active surveillance for avian influenza virus infection in wild birds by analysis of avian fecal samples from the environment. J. Wildl. Dis. 2009, 45:512-518.
11. Rohani P., Breban R., Stallknecht D.E., Drake J.M. Environmental transmission of low pathogenicity avian influenza viruses and its implications for pathogen invasion. Proc. Natl. Acad. Sci. U.S.A. 2009, 106:10365-10369.
12. Stallknecht D.E., Goekjian V.H., Wilcox B.R., Poulson R.L., Brown J.D. Avian influenza virus in aquatic habitats: what do we need to learn?. Avian Dis. 2010, 54:461-465.
13. Vong S., Ly S., Mardy S., Holl D., Buchy P. Environmental contamination during influenza A virus (H5N1) outbreaks, Cambodia, 2006. Emerg. Infect. Dis. 2008, 14:1303-1305.
14. World Health Organisation, 2002. WHO Manual on animal Influenza diagnosis and surveillance (WHO/CDS/CSR/NCS/2002.5 Rev. 1). See: Accessed on 10 February 2011. http://www.who.int/csr/resources/publications/influenza/whocdscsrncs20025rev.pdf.
15. World Health Organisation, 2004. Recommended laboratory tests to identify influenza A/H5 virus in specimens from patients with an influenza-like illness. See: Accessed on 10 February 2011. http://www.who.int/csr/disease/avian_influenza/guidelines/avian_labtests1.pdf.
16. World Health Organisation, 2007. Review of latest available evidence on potential transmission of avian influenza (H5N1) through water and sewage and ways to reduce the risks to human health (WHO/SDE/WSH/06.1). See: Accessed on 9 February 2011. http://www.who.int/water_sanitation_health/emerging/h5n1background.pdf.