Selective isolation of bacteria from soil with hydrophobic materials

World Journal of Microbiology and Biotechnology

Volumn 27, Issue 8, 2011, Pages 1941-1945

  Oku, Shota ^a   Nishiyama, Masaya ^a   Takao, Yuji ^a  

^a NAGASAKI UNIVERSITY   (Japan)

Author keywords

Burkholderia cepacia; Burkholderia fungorum; Cell surface hydrophobicity; Octadecylsilyl silica gel; Polytetrafluoroethylene; Ralstonia pickettii; Selective isolation; Styrene divinyl benzene

Indexed keywords

BURKHOLDERIA; BURKHOLDERIA CEPACIA; CELL SURFACE HYDROPHOBICITY; OCTADECYLSILYL SILICA GEL; RALSTONIA PICKETTII; SELECTIVE ISOLATION; STYRENE-DIVINYL BENZENE;

BACTERIOLOGY; BENZENE; BIOREMEDIATION; BUTADIENE; CELL MEMBRANES; DRIERS (MATERIALS); GELS; HEXANE; HYDROPHOBICITY; ORGANIC POLLUTANTS; POLYTETRAFLUOROETHYLENES; SILICA; SILICA GEL; SOILS; STYRENE;

SURFACES;

BACTERIA (MICROORGANISMS); BURKHOLDERIA; BURKHOLDERIA CEPACIA; BURKHOLDERIA FUNGORUM; RALSTONIA PICKETTII;

EID: 79960559122     PISSN: 09593993     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11274-010-0633-y     Document Type: Article

References (18)

1. Bastiaens L, Springael D, Wattiau P, Harms H, Dewachter R, Verachtert H, Diels L (2000) Isolation of adherent polycyclic aromatic hydrodcarbon (PAH)-degrading bacteria using PAH-sorbing carriers. Appl Environ Microbiol 66: 1834-1843.
2. Cardinale M, Brusetti L, Quatrini P, Borin S, Puglia AM, Rizzi A, Zanardini E, Sorlini C, Corselli C, Daffonchio D (2004) Comparison of different primer sets for use in automated ribosomal intergenic spacer analysis of complex bacterial communities. Appl Environ Microbiol 70: 6147-6156.
3. Coenye T, Vandamme P (2003) Diversity and significance of Burkholderia species occupying diverse ecological niches. Environ Microbiol 5: 719-729.
4. Colores GM, Ward DM, Inskeep WP (2007) Competitive fitness of isolates enriched on phenanthrene sorbed to model phases. Appl Environ Microbiol 73: 4074-4077.
5. Donlon B, Colleran E (1993) A comparison of different methods to determine the hydrophobicity of acetogenic bacteria. J Microbiol Methods 17: 27-37.
6. Friedrich M, Grosser RJ, Kern EA, Inskeep WP, Ward DM (2000) Effect of model sorptive phases on phenanthrene biodegradation: molecular analysis of enrichments and isolates suggests selection based on bioavailability. Appl Environ Microbiol 66: 2703-2710.
7. Muyzer G, De Wall EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl Environ Microbiol 59: 695-700.
8. Neu TR, Poralla K (1990) Emulsifying agents from bacteria isolated during screening for cells with hydrophobic surfaces. Appl Microbiol Biotechnol 32: 521-525.
9. O'Sullivan LA, Mahenthiralingam E (2005) Biotechnological potential within the genus Burkholderia. Lett Appl Microbiol 41: 8-11.
10. Obuekwe CO, Al-Jadi ZK, Al-Saleh ES (2009) Hydrocarbon degradation in relation to cell-surface hydrophobicity among bacterial hydrocarbon degraders from petroleum-contaminated Kwait desert environment. Intern Biodeterio Biodegrad 63: 273-279.
11. Osborne C, Galic M, Sangwan P, Janssen PH (2005) PCR-generated artefact from 16S rRNA gene-specific primers. FEMS Microbiol Lett 248: 183-187.
12. Owsianiak M, Szulc A, Chrzanowski Ł, Cyplik P, Bogacki M, Olejnik-Schmidt AK, Heipieper HJ (2009) Biodegradation and surfactant-mediated biodegradation of diesel fuel by 218 microbial consortia are not correlated to cell surface hydrophobicity. Appl Microbiol Biotechnol 84: 545-553.
13. Pearson WR, Lipman DJ (1988) Improved tools for biological sequence comparison. Proc Natl Acad Sci USA 85: 2444-2448.
14. Rosenberg M, Gutnick D, Rosenberg E (1980) Adherence of bacteria to hydrocarbons: a simple method for measuring cell-surface hydrophobicity. FEMS Microbiol Lett 9: 29-33.
15. Ryan MP, Pembroke JT, Adley CC (2007) Ralstonia pickettii in environmental biotechnology: potential and applications. J Appl Microbiol 103: 754-764.
16. Saito A, Ikeda S, Noritake C, Akasaka M, Fujishiro K, Ando K, Minamisawa K (2007) Evaluation of microbial diversity using ribosomal intergenic spacer analysis. Bisebutsu Seitai 22: 59-71.
17. Tang W-C, White JC, Alexander M (1998) Utilization of sorbed compounds by microorganisms specifically isolated for that purpose. Appl Microbiol Biotechnol 49: 117-121.
18. Vacca DJ, Bleam WF, Hickey WJ (2005) Isolation of soil bacteria adapted to degrade humic acid-sorbed phenanthrene. Appl Environ Microbiol 71: 3797-3805.