메뉴 건너뛰기




Volumn 38, Issue 7, 2011, Pages 297-305

Increased complexity of gene structure and base composition in vertebrates

Author keywords

Endotherm; GC content; Gene structure; Intron; UTR; Vertebrate

Indexed keywords

3' UNTRANSLATED REGION; ARTICLE; CONTROLLED STUDY; CORRELATION ANALYSIS; DATA ANALYSIS; DNA BASE COMPOSITION; EXON; GENE STRUCTURE; GENETIC CODE; GENOME ANALYSIS; HUMAN; INTRON; MEDICAL RECORD; MORPHOLOGY; NONHUMAN;

EID: 79960450999     PISSN: 16738527     EISSN: 18735533     Source Type: Journal    
DOI: 10.1016/j.jgg.2011.06.004     Document Type: Article
Times cited : (5)

References (45)
  • 1
    • 0344622123 scopus 로고
    • Spliced segments at the 5′ terminus of adenovirus 2 late mRNA
    • Berget S.M., Moore C., Sharp P.A. Spliced segments at the 5′ terminus of adenovirus 2 late mRNA. Proc. Natl. Acad. Sci. USA 1977, 74:3171-3175.
    • (1977) Proc. Natl. Acad. Sci. USA , vol.74 , pp. 3171-3175
    • Berget, S.M.1    Moore, C.2    Sharp, P.A.3
  • 2
    • 34347222211 scopus 로고    scopus 로고
    • The neoselectionist theory of genome evolution
    • Bernardi G. The neoselectionist theory of genome evolution. Proc. Natl. Acad. Sci. USA 2007, 104:8385-8390.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 8385-8390
    • Bernardi, G.1
  • 4
    • 33748328059 scopus 로고    scopus 로고
    • The other pigment cell: specification and development of the pigmented epithelium of the vertebrate eye
    • Bharti K., Nguyen M.T., Skuntz S., Bertuzzi S., Arnheiter H. The other pigment cell: specification and development of the pigmented epithelium of the vertebrate eye. Pigment Cell Res. 2006, 19:380-394.
    • (2006) Pigment Cell Res. , vol.19 , pp. 380-394
    • Bharti, K.1    Nguyen, M.T.2    Skuntz, S.3    Bertuzzi, S.4    Arnheiter, H.5
  • 5
    • 0035368207 scopus 로고    scopus 로고
    • The ins and outs of group II introns
    • Bonen L., Vogel J. The ins and outs of group II introns. Trends Genet. 2001, 17:322-331.
    • (2001) Trends Genet. , vol.17 , pp. 322-331
    • Bonen, L.1    Vogel, J.2
  • 6
    • 58149148376 scopus 로고    scopus 로고
    • Drosophila's view on insect vision
    • Borst A. Drosophila's view on insect vision. Curr. Biol. 2009, 19:R36-R47.
    • (2009) Curr. Biol. , vol.19
    • Borst, A.1
  • 7
    • 0037270345 scopus 로고    scopus 로고
    • Seeing chordate evolution through the Ciona genome sequence
    • Cañestro C., Bassham S., Postlethwait J.H. Seeing chordate evolution through the Ciona genome sequence. Genome Biol. 2003, 4:208.
    • (2003) Genome Biol. , vol.4 , pp. 208
    • Cañestro, C.1    Bassham, S.2    Postlethwait, J.H.3
  • 8
    • 1842587751 scopus 로고    scopus 로고
    • Genome size: does bigger mean worse?
    • Charlesworth B., Barton N. Genome size: does bigger mean worse?. Curr. Biol. 2004, 14:R233-R235.
    • (2004) Curr. Biol. , vol.14
    • Charlesworth, B.1    Barton, N.2
  • 9
    • 35248898673 scopus 로고    scopus 로고
    • Patterns of vertebrate isochore evolution revealed by comparison of expressed mammalian, avian, and crocodilian genes
    • Chojnowski J.L., Franklin J., Katsu Y., Iguchi T., Guillette L.J., Kimball R.T., Braun E.L. Patterns of vertebrate isochore evolution revealed by comparison of expressed mammalian, avian, and crocodilian genes. J. Mol. Evol. 2007, 65:259-266.
    • (2007) J. Mol. Evol. , vol.65 , pp. 259-266
    • Chojnowski, J.L.1    Franklin, J.2    Katsu, Y.3    Iguchi, T.4    Guillette, L.J.5    Kimball, R.T.6    Braun, E.L.7
  • 10
    • 0017688583 scopus 로고
    • An amazing sequence arrangement at the 5′ ends of adenovirus 2 messenger RNA
    • Chow L.T., Gelinas R.E., Broker T.R., Roberts R.J. An amazing sequence arrangement at the 5′ ends of adenovirus 2 messenger RNA. Cell 1977, 12:1-8.
    • (1977) Cell , vol.12 , pp. 1-8
    • Chow, L.T.1    Gelinas, R.E.2    Broker, T.R.3    Roberts, R.J.4
  • 11
    • 0035546066 scopus 로고    scopus 로고
    • What controls the length of noncoding DNA?
    • Comeron J.M. What controls the length of noncoding DNA?. Curr. Opin. Genet. Dev. 2001, 11:652-659.
    • (2001) Curr. Opin. Genet. Dev. , vol.11 , pp. 652-659
    • Comeron, J.M.1
  • 12
    • 0029030104 scopus 로고
    • Translational regulation in development
    • Curtis D., Lehmann R., Zamore P.D. Translational regulation in development. Cell 1995, 81:171-178.
    • (1995) Cell , vol.81 , pp. 171-178
    • Curtis, D.1    Lehmann, R.2    Zamore, P.D.3
  • 13
    • 0031803072 scopus 로고    scopus 로고
    • Post-transcriptional gene regulatory mechanisms in eukaryotes: an overview
    • Day D.A., Tuite M.F. Post-transcriptional gene regulatory mechanisms in eukaryotes: an overview. J. Endocrinol. 1998, 157:361-371.
    • (1998) J. Endocrinol. , vol.157 , pp. 361-371
    • Day, D.A.1    Tuite, M.F.2
  • 15
    • 0034133037 scopus 로고    scopus 로고
    • RNA-protein interactions in the control of stability and localization of messenger RNA (review)
    • Derrigo M., Cestelli A., Savettieri G., Di Liegro I. RNA-protein interactions in the control of stability and localization of messenger RNA (review). Int. J. Mol. Med. 2000, 5:111-123.
    • (2000) Int. J. Mol. Med. , vol.5 , pp. 111-123
    • Derrigo, M.1    Cestelli, A.2    Savettieri, G.3    Di Liegro, I.4
  • 16
    • 33745699048 scopus 로고    scopus 로고
    • Cells, molecules and morphogenesis: the making of the vertebrate ear
    • Fritzsch B., Pauley S., Beisel K.W. Cells, molecules and morphogenesis: the making of the vertebrate ear. Brain Res. 2006, 1091:151-171.
    • (2006) Brain Res. , vol.1091 , pp. 151-171
    • Fritzsch, B.1    Pauley, S.2    Beisel, K.W.3
  • 17
    • 33846917522 scopus 로고    scopus 로고
    • Diversity in isochore structure among cold-blooded vertebrates based on GC content of coding and non-coding sequences
    • Fortes G.G., Bouza C., Martínez P., Sánchez L. Diversity in isochore structure among cold-blooded vertebrates based on GC content of coding and non-coding sequences. Genetica 2007, 129:281-289.
    • (2007) Genetica , vol.129 , pp. 281-289
    • Fortes, G.G.1    Bouza, C.2    Martínez, P.3    Sánchez, L.4
  • 20
    • 0031238874 scopus 로고    scopus 로고
    • Molecular evolution of the vertebrate immune system
    • Hughes A.L., Yeager M. Molecular evolution of the vertebrate immune system. Bioessays 1997, 19:777-786.
    • (1997) Bioessays , vol.19 , pp. 777-786
    • Hughes, A.L.1    Yeager, M.2
  • 23
    • 0345306751 scopus 로고    scopus 로고
    • The origins of genome complexity
    • Lynch M., Conery J.S. The origins of genome complexity. Science 2003, 302:1401-1404.
    • (2003) Science , vol.302 , pp. 1401-1404
    • Lynch, M.1    Conery, J.S.2
  • 24
    • 30744475434 scopus 로고    scopus 로고
    • The origins of eukaryotic gene structure
    • Lynch M. The origins of eukaryotic gene structure. Mol. Biol. Evol. 2006, 23:450-468.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 450-468
    • Lynch, M.1
  • 25
    • 34548324240 scopus 로고    scopus 로고
    • Channeling the worm: microfluidic devices for nematode neurobiology
    • Lockery S. Channeling the worm: microfluidic devices for nematode neurobiology. Nat. Methods 2007, 4:691-692.
    • (2007) Nat. Methods , vol.4 , pp. 691-692
    • Lockery, S.1
  • 26
    • 33750718788 scopus 로고    scopus 로고
    • Development, structure, and function of a novel respiratory organ, the lung-air sac system of birds: to go where no other vertebrate has gone
    • Maina J.N. Development, structure, and function of a novel respiratory organ, the lung-air sac system of birds: to go where no other vertebrate has gone. Biol. Rev. Camb. Philos. Soc. 2006, 81:545-579.
    • (2006) Biol. Rev. Camb. Philos. Soc. , vol.81 , pp. 545-579
    • Maina, J.N.1
  • 27
    • 0036911605 scopus 로고    scopus 로고
    • Distribution and characterization of regulatory elements in the human genome
    • Majewski J., Ott J. Distribution and characterization of regulatory elements in the human genome. Genome Res. 2002, 12:1827-1836.
    • (2002) Genome Res. , vol.12 , pp. 1827-1836
    • Majewski, J.1    Ott, J.2
  • 28
    • 0034882101 scopus 로고    scopus 로고
    • The evolution of controlled multitasked gene networks: the role of introns and other noncoding RNAs in the development of complex organisms
    • Mattick J.S., Gagen M.J. The evolution of controlled multitasked gene networks: the role of introns and other noncoding RNAs in the development of complex organisms. Mol. Biol. Evol. 2001, 18:1611-1630.
    • (2001) Mol. Biol. Evol. , vol.18 , pp. 1611-1630
    • Mattick, J.S.1    Gagen, M.J.2
  • 29
    • 33745623123 scopus 로고    scopus 로고
    • Mechanistic insight into how Shh patterns the vertebrate limb
    • McGlinn E., Tabin C.J. Mechanistic insight into how Shh patterns the vertebrate limb. Curr. Opin. Genet. Dev. 2006, 16:426-432.
    • (2006) Curr. Opin. Genet. Dev. , vol.16 , pp. 426-432
    • McGlinn, E.1    Tabin, C.J.2
  • 30
    • 0036797563 scopus 로고    scopus 로고
    • Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA
    • Meijer H.A., Thomas A.A. Control of eukaryotic protein synthesis by upstream open reading frames in the 5′-untranslated region of an mRNA. Biochem. J. 2002, 367:1-11.
    • (2002) Biochem. J. , vol.367 , pp. 1-11
    • Meijer, H.A.1    Thomas, A.A.2
  • 31
    • 0038780670 scopus 로고    scopus 로고
    • Eukaryotic intron loss
    • Mourier T., Jeffares D.C. Eukaryotic intron loss. Science 2003, 300:1393.
    • (2003) Science , vol.300 , pp. 1393
    • Mourier, T.1    Jeffares, D.C.2
  • 32
    • 0031034881 scopus 로고    scopus 로고
    • The reason for as well as the consequence of the cambrian explosion in animal evolution
    • Ohno S. The reason for as well as the consequence of the cambrian explosion in animal evolution. J. Mol. Evol. 1997, 44:S23-S27.
    • (1997) J. Mol. Evol. , vol.44
    • Ohno, S.1
  • 35
    • 0030623731 scopus 로고    scopus 로고
    • Evolution of the ear and hearing: issues and questions
    • Popper A.N., Fay R.R. Evolution of the ear and hearing: issues and questions. Brain Behav. Evol. 1997, 50:213-221.
    • (1997) Brain Behav. Evol. , vol.50 , pp. 213-221
    • Popper, A.N.1    Fay, R.R.2
  • 36
    • 0042921194 scopus 로고    scopus 로고
    • Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution
    • Rogozin I.B., Wolf Y.I., Sorokin A.V., Mirkin B.G., Koonin E.V. Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution. Curr. Biol. 2003, 13:1512-1517.
    • (2003) Curr. Biol. , vol.13 , pp. 1512-1517
    • Rogozin, I.B.1    Wolf, Y.I.2    Sorokin, A.V.3    Mirkin, B.G.4    Koonin, E.V.5
  • 37
    • 0014220933 scopus 로고
    • Major steps in vertebrate evolution
    • Romer A.S. Major steps in vertebrate evolution. Science 1967, 158:1629-1637.
    • (1967) Science , vol.158 , pp. 1629-1637
    • Romer, A.S.1
  • 38
    • 0034708613 scopus 로고    scopus 로고
    • A brief history of Drosophila's contributions to genome research
    • Rubin G.M., Lewis E.B. A brief history of Drosophila's contributions to genome research. Science 2000, 287:2216-2218.
    • (2000) Science , vol.287 , pp. 2216-2218
    • Rubin, G.M.1    Lewis, E.B.2
  • 39
    • 0032475928 scopus 로고    scopus 로고
    • Triploblastic animals more than 1 billion years ago: trace fossil evidence from India
    • Seilacher A., Bose P.K., Pflüer F. Triploblastic animals more than 1 billion years ago: trace fossil evidence from India. Science 1998, 282:80-83.
    • (1998) Science , vol.282 , pp. 80-83
    • Seilacher, A.1    Bose, P.K.2    Pflüer, F.3
  • 41
    • 4143150876 scopus 로고    scopus 로고
    • Preferential loss and gain of introns in 3′ portions of genes suggests a reverse-transcription mechanism of intron insertion
    • Sverdlov A.V., Babenko V.N., Rogozin I.B., Koonin E.V. Preferential loss and gain of introns in 3′ portions of genes suggests a reverse-transcription mechanism of intron insertion. Gene 2004, 338:85-91.
    • (2004) Gene , vol.338 , pp. 85-91
    • Sverdlov, A.V.1    Babenko, V.N.2    Rogozin, I.B.3    Koonin, E.V.4
  • 42
    • 0037708939 scopus 로고    scopus 로고
    • Chordate evolution in a new light
    • Tautz D. Chordate evolution in a new light. Cell 2003, 113:812-813.
    • (2003) Cell , vol.113 , pp. 812-813
    • Tautz, D.1
  • 44
    • 57049144774 scopus 로고    scopus 로고
    • Evolutionary pattern of protein architecture in mammal and fruit fly genomes
    • Yang H., Wu Y., Feng J., Yang S., Tian D. Evolutionary pattern of protein architecture in mammal and fruit fly genomes. Genomics 2009, 93:90-97.
    • (2009) Genomics , vol.93 , pp. 90-97
    • Yang, H.1    Wu, Y.2    Feng, J.3    Yang, S.4    Tian, D.5
  • 45
    • 60549105899 scopus 로고    scopus 로고
    • Patterns of exon-intron architecture variation of genes in eukaryotic genomes
    • Zhu L., Zhang Y., Zhang W., Yang S., Chen J.Q., Tian D. Patterns of exon-intron architecture variation of genes in eukaryotic genomes. BMC Genomics 2009, 10:47.
    • (2009) BMC Genomics , vol.10 , pp. 47
    • Zhu, L.1    Zhang, Y.2    Zhang, W.3    Yang, S.4    Chen, J.Q.5    Tian, D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.