nucleR: A package for non-parametric nucleosome positioning

Bioinformatics

Volumn 27, Issue 15, 2011, Pages 2149-2150

  Flores, Oscar ^a   Orozco, Modesto ^a,b  

^a Institute of Research in Biomedicine   (Spain)

^b UNIVERSITY OF BARCELONA   (Spain)

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; COMPUTER PROGRAM; FOURIER ANALYSIS; GENETICS; GENOMICS; METABOLISM; METHODOLOGY; NUCLEOSOME;

ALGORITHMS; FOURIER ANALYSIS; GENOMICS; NUCLEOSOMES; SOFTWARE;

EID: 79960434317     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr345     Document Type: Article

References (8)

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2. Deniz,Ö. et al. (2011) Physical properties of naked DNAsignal gene regulatory regions. (in press).
3. Di Gesù,V. et al. (2009) A multi-layer method to study genome-scale positions of nucleosomes. Genomics, 93, 140-145.
4. Jiang,C. and Pugh,B.F. (2009) Nucleosome positioning and gene regulation: advances through genomics. Nature Rev. Genet., 10, 161-172.
5. Lee,W. et al. (2007) A high-resolution atlas of nucleosome occupancy in yeast. Nature Genet., 39, 1235-1244.
6. Smith,S.W. (1999) The Scientist and Engineer's Guide to Digital Signal Processing, 2nd edn. California Technical Publishing, San Diego, CA, USA.
7. Yassour,M. et al. (2008) Nucleosome positioning from tiling microarray data. Bioinformatics, 24, i139-i146.
8. Yuan,G.-C. et al. (2005) Genome-scale identification of nucleosome positions in S.cerevisiae. Science, 309, 626-630.