Genome sequence of strain IMCC1989, a novel member of the marine Gammaproteobacteria

Journal of Bacteriology

Volumn 193, Issue 14, 2011, Pages 3672-3673

  Jang, Yoonra ^a   Oh, Hyun Myung ^a   Kim, Hana ^a,b   Kang, Ilnam ^a   Cho, Jang Cheon ^a  

^a Inha University   (South Korea)

^b Massachusetts Institute of Technology   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; GLYOXYLIC ACID; RIBOSOME RNA; TRANSFER RNA; UNTRANSLATED RNA;

BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM ISOLATE; BIOSYNTHESIS; FLAGELLUM; GAMMAPROTEOBACTERIA; GENE LIBRARY; GENE SEQUENCE; MARINE BACTERIUM; NONHUMAN; NOTE; OPEN READING FRAME; PHYLOGENY; PRIORITY JOURNAL; PROPHAGE; REGULON;

BASE SEQUENCE; GAMMAPROTEOBACTERIA; GENOME, BACTERIAL; MOLECULAR SEQUENCE DATA; SEAWATER;

CANDIDATUS ENDOBUGULA; GAMMAPROTEOBACTERIA; TEREDINIBACTER;

EID: 79960413276     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.05202-11     Document Type: Note

References (11)

1. Aziz, R., et al. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
2. Balcázar, J. L., N. M. Lee, J. Pintado, and M. Planas. 2010. Phylogenetic characterization and in situ detection of bacterial communities associated with seahorses (Hippocampus guttulatus) in captivity. Syst. Appl. Microbiol. 33:71-77.
3. Bentley, D. R., et al. 2008. Accurate whole human genome sequencing using reversible terminator chemistry. Nature 456:53-59.
4. Chen, M.-H., et al. 10 September 2010. Pseudoteredinibacter isoporae gen. nov., sp. nov., a marine bacterium, isolated from the reef-building coral Isopora palifera. Int. J. Syst. Evol. Microbiol. doi:ijs.0.024190-0v1-ijs.0.024190-0. [Epub ahead of print.].
5. Cho, J.-C., and S. J. Giovannoni. 2004. Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria. Appl. Environ. Microbiol. 70:432-440.
6. Connon, S. A., and S. J. Giovannoni. 2002. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates. Appl. Environ. Microbiol. 68:3878-3885.
7. Haygood, M. G., and S. K. Davidson. 1997. Small-subunit rRNA genes and in situ hybridization with oligonucleotides specific for the bacterial symbionts in the larvae of the bryozoan Bugula neritina and proposal of "Candidatus endobugula sertula." Appl. Environ. Microbiol. 63:4612-4616.
8. Li, H., Y. Yu, W. Luo, Y. Zeng, and B. Chen. 2009. Bacterial diversity in surface sediments from the Pacific Arctic Ocean. Extremophiles 13:233-246.
9. Lim, G. E., and M. G. Haygood. 2004. "Candidatus Endobugula glebosa," a specific bacterial symbiont of the marine bryozoan Bugula simplex. Appl. Environ. Microbiol. 70:4921-4929.
10. Urios, L., L. Intertaglia, F. Lesongeur, and P. Lebaron. 20 August 2010. Eionea nigra gen. nov., sp. nov., a gammaproteobacterium from the Mediterranean Sea. Int. J. Syst. Evol. Microbiol. doi:10.1099/ijs.0.023952-0. [Epub ahead of print.]
11. Zerbino, D. R., and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.