Direct analysis of α- And β-chains of hemoglobins from mammalian blood samples by nanoESI mass spectrometry during in-capillary proteolytic digestion

Amino Acids

Volumn 41, Issue 2, 2011, Pages 343-350

  Henning, Stefanie ^a   Mormann, Michael ^a   Peter Katalinić, Jasna ^a   Pohlentz, Gottfried ^a  

^a UNIVERSITY OF MÜNSTER   (Germany)

Author keywords

De novo sequencing; FT ICR MS; Hemoglobin; In capillary digestion; NanoESI MS

Indexed keywords

HEMOGLOBIN ALPHA CHAIN; HEMOGLOBIN BETA CHAIN;

ARTICLE; BLOOD SAMPLING; COLLISIONALLY ACTIVATED DISSOCIATION; HEMOGLOBIN ANALYSIS; HUMAN; ION CYCLOTRON RESONANCE MASS SPECTROMETRY; MOLECULAR WEIGHT; NANOANALYSIS; NONHUMAN; PRIORITY JOURNAL; PROTEIN DEGRADATION; SEQUENCE ANALYSIS; SPECIES DIFFERENTIATION; TANDEM MASS SPECTROMETRY;

ALPHA-GLOBINS; AMINO ACID SEQUENCE; ANIMALS; ANTELOPES; BETA-GLOBINS; ELEPHANTS; HUMANS; MOLECULAR SEQUENCE DATA; MOLECULAR WEIGHT; NANOTECHNOLOGY; PEPTIDE FRAGMENTS; RODENTIA; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION;

DOLICHOTIS PATAGONUM; ELEPHAS MAXIMUS; GAZELLA SUBGUTTUROSA; LOXODONTA; LOXODONTA AFRICANA; MAMMALIA; PATAGONA;

EID: 79960280676     PISSN: 09394451     EISSN: 14382199     Source Type: Journal    
DOI: 10.1007/s00726-010-0671-7     Document Type: Article

References (40)

1. SF Altschul TL Madden AA Schäffer J Zhang Z Zhang W Miller DJ Lipman 1997 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res 25 3389 3402 9254694 10.1093/nar/25.17.3389 1:CAS:528:DyaK2sXlvFyhu7w%3D (Pubitemid 27359211)
2. BL Boys MC Kuprowski L Konermann 2007 Symmetric behavior of hemoglobin alpha- and beta-subunits during acid-induced denaturation observed by electrospray mass spectrometry Biochemistry 46 10675 10684 17718518 10.1021/bi701076q 1:CAS:528:DC%2BD2sXpsVelsLg%3D (Pubitemid 47421998)
3. SO Brennan 2008 Fifty-eight years of hemoglobin analysis Clin Chem 54 8 10 18160724 10.1373/clinchem.2007.097485 1:CAS:528:DC%2BD1cXmtFemtA%3D%3D (Pubitemid 351182589)
4. A Charvat B Abel 2007 How to make big molecules fly out of liquid water: applications, features and physics of laser assisted liquid phase dispersion mass spectrometry Phys Chem Chem Phys 9 3335 3360 17664960 10.1039/b615114k 1:CAS:528:DC%2BD2sXot12lsrs%3D
5. KR Clauser PR Baker AL Burlingame 1999 Role of accurate mass measurement (± 10 ppm) in protein identification strategies employing MS or MS/MS and database searching Anal Chem 71 2871 2882 10424174 10.1021/ac9810516 1:CAS:528:DyaK1MXjtlWqs78%3D (Pubitemid 29340480)
6. AS Davison BN Green NB Roberts 2008 Fetal hemoglobin: assessment of glycation and acetylation status by electrospray ionization mass spectrometry Clin Chem Lab Med 46 1230 1238 18597590 10.1515/CCLM.2008.257 1:CAS:528:DC%2BD1cXht1eksbbK
7. P Desmeules J Cousineau P Allard 2010 Biological variation of glycated haemoglobin in a paediatric population and its application to calculation of significant change between results Ann Clin Biochem 47 35 38 19940204 10.1258/acb.2009.009113
8. WA Eaton ER Henry J Hofrichter A Mozzarelli 1999 Is cooperative oxygen binding by hemoglobin really understood? Nat Struct Biol 6 351 358 10201404 10.1038/7586 1:CAS:528:DyaK1MXisVChsbs%3D (Pubitemid 29166484)
9. BN Green JP Williams 2007 Prediction of product ion isotope ratios in the tandem electrospray ionization mass spectra from the second isotope of tryptic peptides: Identification of the variant beta 131 Gln → Glu, hemoglobin camden J Am Soc Mass Spectrom 18 1493 1498 17583531 10.1016/j.jasms.2007.05.005 1:CAS:528:DC%2BD2sXosVSmtrg%3D (Pubitemid 47089001)
10. WP Griffith IA Kaltashov 2003 Highly asymmetric interactions between globin chains during hemoglobin assembly revealed by electrospray ionization mass spectrometry Biochemistry 42 10024 10033 12924951 10.1021/bi034035y 1:CAS:528:DC%2BD3sXlvVGls74%3D (Pubitemid 37012878)
11. WP Griffith IA Kaltashov 2006 Mass spectrometry in the study of hemoglobin: from covalent structure to higher order assembly Curr Org Chem 10 535 553 10.2174/138527206776055303 1:CAS:528:DC%2BD28Xit1Sjtbo%3D
12. WP Griffith IA Kaltashov 2007 Protein conformational heterogeneity as a binding catalyst: ESI-MS study of hemoglobin H formation Biochemistry 46 2020 2026 17253776 10.1021/bi062032q 1:CAS:528:DC%2BD2sXot1Wquw%3D%3D
13. WP Griffith IA Kaltashov 2008 Phenotypic analysis of Atlantic cod hemoglobin chains using a combination of top-down and bottom-up mass spectrometric approaches Int J Mass Spectrom 278 114 121 10.1016/j.ijms.2008.04. 020 1:CAS:528:DC%2BD1cXht1Knt7fN
14. R Hardison 1998 Hemoglobins from bacteria to man: evolution of different patterns of gene expression J Exp Biol 201 1099 1117 9510523 1:CAS:528:DyaK1cXjvVOhsbg%3D (Pubitemid 28278316)
15. RC Hardison DHK Chui B Giardine C Riemer GP Patrinos N Anagnou W Miller H Wajcman 2002 HbVar: a relational database of human hemoglobin variants and thalassemia mutations at the globin gene server Hum Mutat 19 225 233 11857738 10.1002/humu.10044 1:CAS:528:DC%2BD38XktFKktL8%3D (Pubitemid 34195183)
16. S Henning J Peter-Katalinić G Pohlentz 2007 Structure elucidation of glycoproteins by direct nanoESI MS and MS/MS analysis of proteolytic glycopeptides J Mass Spectrom 42 1415 1421 17960575 10.1002/jms.1265 1:CAS:528:DC%2BD2sXhtlKktbzN (Pubitemid 350113459)
17. CT Houston JP Reilly 1997 Rapid analysis of hemoglobin from whole human blood by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry Rapid Commun Mass Spectrom 11 1435 1439 9299761 10.1002/(SICI)1097-0231(19970830)11:13<1435::AID-RCM24>3.0.CO;2-A 1:CAS:528:DyaK2sXmtVelu70%3D (Pubitemid 27398633)
18. VM Ingram 1959 Abnormal human haemoglobins. III the chemical difference between normal and sickle cell haemoglobins Biochim Biophys Acta 36 402 411 13852872 10.1016/0006-3002(59)90183-0 1:CAS:528:DyaF3cXivF2jtw%3D%3D
19. P Kleinert M Schmid K Zurbriggen O Speer M Schmugge B Roschitzki SS Durka U Leopold T Kuster CW Heizmann H Frischknecht H Troxler 2008 Mass spectrometry: a tool for enhanced detection of hemoglobin variants Clin Chem 54 69 76 17932132 10.1373/clinchem.2007.089961 1:CAS:528:DC%2BD1cXmtFeltw%3D%3D (Pubitemid 351182598)
20. T Kleinschmidt JG Sgouros 1987 Hemoglobin sequences 108 Biol Chem H-S 368 579 616 1:CAS:528:DyaL2sXlt12iurk%3D
21. T Kleinschmidt J Czelusniak M Goodman G Braunitzer 1986 Paenungulata-a comparison of the hemoglobin sequnces from elephant, hyrax and manatee Mol Biol Evol 3 427 435 3444412 1:CAS:528:DyaL28XmtVKqtLo%3D (Pubitemid 16010524)
22. ML Larsen M Horder EF Mogensen 1990 Effect of long-term monitoring of glycosylated hemoglobin levels in insulin-dependent diabetes mellitus New Engl J Med 323 1021 1025 2215560 10.1056/NEJM199010113231503 1:STN:280: DyaK3M%2FhsFWquw%3D%3D (Pubitemid 20336960)
23. SY Lin SH Shih DC Wu YC Lee CI Wu LH Lo J Shiea 2007 Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the detection of hemoglobins as the protein biomarkers for fecal occult blood Rapid Commun Mass Spectrom 21 3311 3316 17879387 10.1002/rcm.3217 1:CAS:528: DC%2BD2sXht1ektLfL (Pubitemid 47598783)
24. T Nakanishi M Kishikawa A Shimizu A Hayashi F Inoue 1995 Assignment of the ions in the electrospray ionization mass spectra of the tryptic digest of the non-derivatized globin, covering the whole sequence of alpha- and beta-chains: a rapid diagnosis for haemoglobinopathy J Mass Spectrom 30 1663 1670 10.1002/jms.1190301205 1:CAS:528:DyaK28Xht1altw%3D%3D
25. GP Patrinos B Giardine C Riemer W Miller DHK Chui NP Anagnou H Wajcman RC Hardison 2004 Improvements in the HbVar database of human hemoglobin variants and thalassemia mutations for population and sequence variation studies Nucleic Acids Res 32 Database issue D537 D541 14681476 10.1093/nar/gkh006 1:CAS:528:DC%2BD3sXhtVSrtbfJ
26. L Pauling HA Itano SJ Singer IC Wells 1949 Sickle cell anemia a molecular disease Science 110 543 548 15395398 10.1126/science.110.2865.543 1:CAS:528:DyaG3cXisl2ktw%3D%3D
27. G Pohlentz S Kölbl J Peter-Katalinić 2005 High sequence coverage by in-capillary proteolysis of native proteins and simultaneous analysis of the resulting peptides by nanoESI MS and MS/MS Proteomics 5 1758 1763 15761958 10.1002/pmic.200401060 1:CAS:528:DC%2BD2MXkslejsrs%3D (Pubitemid 40686221)
28. DK Rai B Landin G Alvelius WJ Griffiths 2002 Electrospray tandem mass spectrometry of intact beta-chain hemoglobin variants Anal Chem 74 2097 2102 12033312 10.1021/ac011068f 1:CAS:528:DC%2BD38XitFaitbY%3D (Pubitemid 34465408)
29. MW Senko SC Beu FW McLafferty 1995 Determination of monoisotopic masses and ion populations for large biomolecules from resolved isotopic distributions J Am Soc Mass Spectrom 6 229 233 10.1016/1044-0305(95)00017-8 1:CAS:528:DyaK2MXlt1Oqu7Y%3D
30. A Shimizu T Nakanishi A Miyazaki 2006 Detection and characterization of variant and modified structures of proteins in blood and tissues by mass spectrometry Mass Spectrom Rev 25 686 712 16565975 10.1002/mas.20086 1:CAS:528:DC%2BD28XpslGltL8%3D (Pubitemid 44330227)
31. DA Simmons DJ Wilson GA Lajoie A Doherty-Kirby L Konermann 2004 Subunit disassembly and unfolding kinetics of hemoglobin studied by time-resolved electrospray mass spectrometry Biochemistry 43 14792 14801 15544350 10.1021/bi048501a 1:CAS:528:DC%2BD2cXptVyrtbs%3D (Pubitemid 39524954)
32. A Takátsy K Böddi L Nagy G Nagy S Szabó L Markó I Wittmann R Ohmacht T Ringer GK Bonn D Gjerde Z Szabó 2009 Enrichment of Amadori products derived from the nonenzymatic glycation of proteins using microscale boronate affinity chromatography Anal Biochem 393 8 22 19524544 10.1016/j.ab.2009.06.007
33. Y Wada 2002 Advanced analytical methods for hemoglobin variants J Chromatogr 781 291 301 10.1016/S1570-0232(02)00558-5 1:CAS:528: DC%2BD3sXktFCitw%3D%3D (Pubitemid 35351672)
34. Y Wada A Hayashi T Fujita T Matsuo I Katakuse H Matsuda 1981 Structural analysis of human hemoglobin variants with field desorption mass spectrometry Biochim Biophys Acta 667 233 241 7213803 1:CAS:528:DyaL3MXpvFWgtQ%3D%3D (Pubitemid 11141030)
35. Y Wada A Hayashi T Fujita T Matsuo I Katakuse H Matsuda 1983 Structural analysis of human hemoglobin variants by mass spectrometry Int J Mass Spectrom Ion Proc 48 209 212 10.1016/0020-7381(83)87065-X 1:CAS:528:DyaL3sXhtVeku7w%3D
36. H Wajcman L Kiger 2002 Haemoglobin from microorganism to man: a single protein folding, a variety of functions C R Biol 325 1159 1174 12520866 10.1016/S1631-0691(02)01537-8 1:CAS:528:DC%2BD3sXpsVGktA%3D%3D (Pubitemid 36024554)
37. H Wajcman J Riou 2009 Globin chain analysis: an important tool in phenotype study of hemoglobin disorders Clin Biochem 42 1802 1806 19500561 10.1016/j.clinbiochem.2009.05.014 1:CAS:528:DC%2BD1MXhsFShur7K
38. H Wajcman C Prehu J Bardakdjian-Michau D Prome J Riou C Godart M Mathis D Hurtrel F Galacteros 2001 Abnormal hemoglobins: laboratory methods Hemoglobin 25 169 181 11480779 10.1081/HEM-100104026 1:CAS:528:DC%2BD3MXlsVOisr8%3D (Pubitemid 32660538)
39. BJ Wild BN Green EK Cooper MRA Lalloz S Erten AD Stephens DM Layton 2001 Rapid identification of hemoglobin variants by electrospray ionization mass spectrometry Blood Cell Mol Dis 27 691 704 10.1006/bcmd.2001.0430 1:STN:280:DC%2BD38%2FivVWitw%3D%3D (Pubitemid 32757065)
40. I Zanella-Cleon P Joly M Becchi A Francina 2009 Phenotype determination of hemoglobinopathies by mass spectrometry Clin Biochem 42 1807 1817 19409377 10.1016/j.clinbiochem.2009.04.010 1:CAS:528:DC%2BD1MXhsFShur7L