Low-temperature neutron diffraction structures of N -glycoprotein linkage models and analogues: Structure refinement and trifurcated hydrogen bonds

Journal of the American Chemical Society

Volumn 133, Issue 26, 2011, Pages 10042-10045

  Cioci, Gianluca ^a   Srivastava, Amrita ^b   Loganathan, Duraikkannu ^b   Mason, Sax A ^c   Peérez, Serge ^a   Imberty, Anne ^d  

^a EUROPEAN SYNCHROTRON RADIATION FACILITY   (France)

^b INDIAN INSTITUTE OF TECHNOLOGY MADRAS   (India)

^c INSTITUT LAUE LANGEVIN   (France)

^d Centre National de la Recherche Scientifique   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ASPARAGINE RESIDUE; DIFFRACTION STRUCTURES; GEOMETRICAL PARAMETERS; HIGH RESOLUTION; HYDROGEN ATOMS; HYDROPHOBIC CONTACT; LOW TEMPERATURES; MOLECULAR DYNAMICS SIMULATIONS; N-GLYCOPROTEIN; PARAMETRIZATIONS; STRUCTURE REFINEMENTS; THREE-DIMENSIONAL STRUCTURE;

AMINO ACIDS; CARBOHYDRATES; CRYSTAL STRUCTURE; GLYCOPROTEINS; HYDROGEN; MOLECULAR DYNAMICS; NEUTRON DIFFRACTION; NEUTRONS; THREE DIMENSIONAL;

HYDROGEN BONDS;

CARBOHYDRATE; GLYCOPROTEIN; HYDROGEN;

ARTICLE; CRYSTAL STRUCTURE; GLYCOSYLATION; HYDROGEN BOND; LOW TEMPERATURE PROCEDURES; MOLECULAR DYNAMICS; NEUTRON DIFFRACTION; PROTEIN ANALYSIS; PROTEIN STRUCTURE;

CRYSTALLOGRAPHY, X-RAY; GLYCOPROTEINS; HYDROGEN BONDING; MODELS, MOLECULAR; NEUTRON DIFFRACTION; PROTEIN CONFORMATION; TEMPERATURE;

EID: 79959894619     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja203239j     Document Type: Article

References (22)

1. Dwek, R. A. Chem. Rev. 1996, 96, 683
2. Spiro, R. G. Glycobiology 2002, 12, 43R
3. Delbaere, L. T. Biochem. J. 1974, 143, 197
4. Ohanessian, J.; Avenel, D.; Neuman, A.; Gillier-Pandraud, H. Carbohydr. Res. 1980, 80, 1
5. Lakshmanan, T.; Sriram, D.; Priya, K.; Loganathan, D. Biochem. Biophys. Res. Commun. 2003, 312, 405
6. Loganathan, D.; Aich, U. Glycobiology 2006, 16, 343
7. Allen, F. H.; Bruno, I. J. Acta Crystallogr. 2010, B66, 380
8. Jeffrey, G. A.; Takagi, S. Acc. Chem. Res. 1978, 11, 264
9. Steiner, T.; Saenger, W. J. Am. Chem. Soc. 1992, 114, 10146
10. Peérez, S.; Gautier, C.; Imberty, A. Oligosaccharide Conformations by Diffraction Methods. In Oligosaccharides in Chemistry and Biology: A Comprehensive Handbook; Ernst, B.; Hart, G.; Sinay, P., Eds.; Wiley-VCH: Weinheim, Germany, 2000; pp 969 ff.
11. Sriram, D.; Lakshmanan, T.; Loganathan, D.; Srinivasan, S. Carbohydr. Res. 1998, 309, 227
12. Sriram, D.; Sreenivasan, H.; Srinivasan, S.; Priya, K.; Vishnu Thirtha, M.; Loganathan, D. Acta Crystallogr. 1997, C53, 1075
13. Wilkinson, C.; Khamis, H. W.; Stansfield, R. D.; McIntyre, G. J. J. Appl. Crystallogr. 1988, 21
14. Sheldrick, G. M. SHELXL-97: Program for Crystal Structure Refinement; University of Göttingen: Göttingen, Germany, 1997.
15. Mohamed Naseer Ali, M.; Aich, U.; Peérez, S.; Imberty, A.; Loganathan, D. Carbohydr. Res. 2009, 344, 355
16. Mohamed Naseer Ali, M.; Aich, U.; Varghese, B.; Peérez, S.; Imberty, A.; Loganathan, D. J. Am. Chem. Soc. 2008, 130, 8317
17. French, A. D.; Csonka, G. I. Cellulose [Online early access]. DOI: 10.1007/s10570-011-9539-6. Published Online: April 11, 2011.
18. Klein, R. A. J. Am. Chem. Soc. 2002, 124, 13931
19. Spek, A. L. Acta Crystallogr. 2009, D65, 148
20. Desiraju, G. R.; Steiner, T. The Weak Hydrogen Bond in Structural Chemistry and Biology; Oxford University Press: New York, 1999.
21. Whitten, A. E.; Spackman, M. A. Acta Crystallogr. 2006, B62, 875
22. Kouwijzer, M. L. C. E.; Eijck, B. P. V.; Kroes, S. J.; Kroon, J. J. Comput. Chem. 1993, 14, 1281