-
1
-
-
63049091236
-
A systematic survey identifies prions and illuminates sequence features of prionogenic proteins
-
Alberti S., Halfmann R., King O., Kapila A., Lindquist S. A systematic survey identifies prions and illuminates sequence features of prionogenic proteins. Cell 2009, 137:146-158.
-
(2009)
Cell
, vol.137
, pp. 146-158
-
-
Alberti, S.1
Halfmann, R.2
King, O.3
Kapila, A.4
Lindquist, S.5
-
2
-
-
34047271439
-
Effects of ubiquitin system alterations on the formation and loss of a yeast prion
-
Allen K.D., Chernova T.A., Tennant E.P., Wilkinson K.D., Chernoff Y.O. Effects of ubiquitin system alterations on the formation and loss of a yeast prion. J. Biol. Chem. 2007, 282:3004-3013.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 3004-3013
-
-
Allen, K.D.1
Chernova, T.A.2
Tennant, E.P.3
Wilkinson, K.D.4
Chernoff, Y.O.5
-
3
-
-
56149086182
-
P bodies promote stress granule assembly in Saccharomyces cerevisiae
-
Buchan J.R., Muhlrad D., Parker R. P bodies promote stress granule assembly in Saccharomyces cerevisiae. J. Cell Biol. 2008, 183:441-455.
-
(2008)
J. Cell Biol.
, vol.183
, pp. 441-455
-
-
Buchan, J.R.1
Muhlrad, D.2
Parker, R.3
-
4
-
-
0029052468
-
Role of the chaperone protein Hsp104 in propagation of the yeast prion-like factor [psi+]
-
Chernoff Y.O., Lindquist S.L., Ono B., Inge-Vechtomov S.G., Liebman S.W. Role of the chaperone protein Hsp104 in propagation of the yeast prion-like factor [psi+]. Science 1995, 268:880-884.
-
(1995)
Science
, vol.268
, pp. 880-884
-
-
Chernoff, Y.O.1
Lindquist, S.L.2
Ono, B.3
Inge-Vechtomov, S.G.4
Liebman, S.W.5
-
5
-
-
0033500152
-
Evidence for a protein mutator in yeast: role of the Hsp70-related chaperone ssb in formation, stability, and toxicity of the [PSI] prion
-
Chernoff Y.O., Newnam G.P., Kumar J., Allen K., Zink A.D. Evidence for a protein mutator in yeast: role of the Hsp70-related chaperone ssb in formation, stability, and toxicity of the [PSI] prion. Mol. Cell. Biol. 1999, 19:8103-8112.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 8103-8112
-
-
Chernoff, Y.O.1
Newnam, G.P.2
Kumar, J.3
Allen, K.4
Zink, A.D.5
-
6
-
-
35948951960
-
Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae
-
Decker C.J., Teixeira D., Parker R. Edc3p and a glutamine/asparagine-rich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae. J. Cell Biol. 2007, 179:437-449.
-
(2007)
J. Cell Biol.
, vol.179
, pp. 437-449
-
-
Decker, C.J.1
Teixeira, D.2
Parker, R.3
-
7
-
-
0030482356
-
Genesis and variability of [PSI] prion factors in Saccharomyces cerevisiae
-
Derkatch I.L., Chernoff Y.O., Kushnirov V.V., Inge-Vechtomov S.G., Liebman S.W. Genesis and variability of [PSI] prion factors in Saccharomyces cerevisiae. Genetics 1996, 144:1375-1386.
-
(1996)
Genetics
, vol.144
, pp. 1375-1386
-
-
Derkatch, I.L.1
Chernoff, Y.O.2
Kushnirov, V.V.3
Inge-Vechtomov, S.G.4
Liebman, S.W.5
-
8
-
-
0035958585
-
Prions affect the appearance of other prions: the story of [PIN(+)]
-
Derkatch I.L., Bradley M.E., Hong J.Y., Liebman S.W. Prions affect the appearance of other prions: the story of [PIN(+)]. Cell 2001, 106:171-182.
-
(2001)
Cell
, vol.106
, pp. 171-182
-
-
Derkatch, I.L.1
Bradley, M.E.2
Hong, J.Y.3
Liebman, S.W.4
-
9
-
-
0030752709
-
Aggregation of huntingtin in neuronal intranuclear inclusions and dystrophic neurites in brain
-
DiFiglia M., Sapp E., Chase K.O., Davies S.W., Bates G.P., Vonsattel J.P., Aronin N. Aggregation of huntingtin in neuronal intranuclear inclusions and dystrophic neurites in brain. Science 1997, 277:1990-1993.
-
(1997)
Science
, vol.277
, pp. 1990-1993
-
-
DiFiglia, M.1
Sapp, E.2
Chase, K.O.3
Davies, S.W.4
Bates, G.P.5
Vonsattel, J.P.6
Aronin, N.7
-
10
-
-
78649824640
-
Optical trapping with high forces reveals unexpected behaviors of prion fibrils
-
Dong J., Castro C.E., Boyce M.C., Lang M.J., Lindquist S. Optical trapping with high forces reveals unexpected behaviors of prion fibrils. Nat. Struct. Mol. Biol. 2010, 17:1422-1430.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1422-1430
-
-
Dong, J.1
Castro, C.E.2
Boyce, M.C.3
Lang, M.J.4
Lindquist, S.5
-
11
-
-
77955361686
-
Functional amyloid in Pseudomonas
-
Dueholm M.S., Petersen S.V., Sønderkær M., Larsen P., Christiansen G., Hein K.L., Enghild J.J., Nielsen J.L., Nielsen K.L., Nielsen P.H., et al. Functional amyloid in Pseudomonas. Mol. Microbiol. 2010, 77:1009-1020.
-
(2010)
Mol. Microbiol.
, vol.77
, pp. 1009-1020
-
-
Dueholm, M.S.1
Petersen, S.V.2
Sønderkær, M.3
Larsen, P.4
Christiansen, G.5
Hein, K.L.6
Enghild, J.J.7
Nielsen, J.L.8
Nielsen, K.L.9
Nielsen, P.H.10
-
12
-
-
33746656653
-
A network of protein interactions determines polyglutamine toxicity
-
Duennwald M.L., Jagadish S., Giorgini F., Muchowski P.J., Lindquist S. A network of protein interactions determines polyglutamine toxicity. Proc. Natl. Acad. Sci. USA 2006, 103:11051-11056.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 11051-11056
-
-
Duennwald, M.L.1
Jagadish, S.2
Giorgini, F.3
Muchowski, P.J.4
Lindquist, S.5
-
13
-
-
5044235541
-
Prediction of sequence-dependent and mutational effects on the aggregation of peptides and proteins
-
Fernandez-Escamilla A.M., Rousseau F., Schymkowitz J., Serrano L. Prediction of sequence-dependent and mutational effects on the aggregation of peptides and proteins. Nat. Biotechnol. 2004, 22:1302-1306.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 1302-1306
-
-
Fernandez-Escamilla, A.M.1
Rousseau, F.2
Schymkowitz, J.3
Serrano, L.4
-
14
-
-
0026019655
-
Rate of beta-structure formation in polypeptides
-
Finkelstein A.V. Rate of beta-structure formation in polypeptides. Proteins 1991, 9:23-27.
-
(1991)
Proteins
, vol.9
, pp. 23-27
-
-
Finkelstein, A.V.1
-
15
-
-
78650441363
-
Essential role of coiled coils for aggregation and activity of Q/N-rich prions and PolyQ proteins
-
Fiumara F., Fioriti L., Kandel E.R., Hendrickson W.A. Essential role of coiled coils for aggregation and activity of Q/N-rich prions and PolyQ proteins. Cell 2010, 143:1121-1135.
-
(2010)
Cell
, vol.143
, pp. 1121-1135
-
-
Fiumara, F.1
Fioriti, L.2
Kandel, E.R.3
Hendrickson, W.A.4
-
16
-
-
56249101714
-
Malleable machines take shape in eukaryotic transcriptional regulation
-
Fuxreiter M., Tompa P., Simon I., Uversky V.N., Hansen J.C., Asturias F.J. Malleable machines take shape in eukaryotic transcriptional regulation. Nat. Chem. Biol. 2008, 4:728-737.
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 728-737
-
-
Fuxreiter, M.1
Tompa, P.2
Simon, I.3
Uversky, V.N.4
Hansen, J.C.5
Asturias, F.J.6
-
17
-
-
0030712145
-
Self-seeded fibers formed by Sup35, the protein determinant of [PSI+], a heritable prion-like factor of S. cerevisiae
-
Glover J.R., Kowal A.S., Schirmer E.C., Patino M.M., Liu J.J., Lindquist S. Self-seeded fibers formed by Sup35, the protein determinant of [PSI+], a heritable prion-like factor of S. cerevisiae. Cell 1997, 89:811-819.
-
(1997)
Cell
, vol.89
, pp. 811-819
-
-
Glover, J.R.1
Kowal, A.S.2
Schirmer, E.C.3
Patino, M.M.4
Liu, J.J.5
Lindquist, S.6
-
18
-
-
1542380028
-
The prion curing agent guanidinium chloride specifically inhibits ATP hydrolysis by Hsp104
-
Grimminger V., Richter K., Imhof A., Buchner J., Walter S. The prion curing agent guanidinium chloride specifically inhibits ATP hydrolysis by Hsp104. J. Biol. Chem. 2004, 279:7378-7383.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 7378-7383
-
-
Grimminger, V.1
Richter, K.2
Imhof, A.3
Buchner, J.4
Walter, S.5
-
19
-
-
57149116929
-
Tight regulation of unstructured proteins: from transcript synthesis to protein degradation
-
Gsponer J., Futschik M.E., Teichmann S.A., Babu M.M. Tight regulation of unstructured proteins: from transcript synthesis to protein degradation. Science 2008, 322:1365-1368.
-
(2008)
Science
, vol.322
, pp. 1365-1368
-
-
Gsponer, J.1
Futschik, M.E.2
Teichmann, S.A.3
Babu, M.M.4
-
20
-
-
78049361927
-
Epigenetics in the extreme: prions and the inheritance of environmentally acquired traits
-
Halfmann R., Lindquist S. Epigenetics in the extreme: prions and the inheritance of environmentally acquired traits. Science 2010, 330:629-632.
-
(2010)
Science
, vol.330
, pp. 629-632
-
-
Halfmann, R.1
Lindquist, S.2
-
21
-
-
77249122579
-
Prions, protein homeostasis, and phenotypic diversity
-
Halfmann R., Alberti S., Lindquist S. Prions, protein homeostasis, and phenotypic diversity. Trends Cell Biol. 2010, 20:125-133.
-
(2010)
Trends Cell Biol.
, vol.20
, pp. 125-133
-
-
Halfmann, R.1
Alberti, S.2
Lindquist, S.3
-
22
-
-
44949181936
-
Amyloids: friend or foe?
-
Hammer N.D., Wang X., McGuffie B.A., Chapman M.R. Amyloids: friend or foe?. J. Alzheimers Dis. 2008, 13:407-419.
-
(2008)
J. Alzheimers Dis.
, vol.13
, pp. 407-419
-
-
Hammer, N.D.1
Wang, X.2
McGuffie, B.A.3
Chapman, M.R.4
-
23
-
-
0038576863
-
A method to assess compositional bias in biological sequences and its application to prion-like glutamine/asparagine-rich domains in eukaryotic proteomes
-
Harrison P.M., Gerstein M. A method to assess compositional bias in biological sequences and its application to prion-like glutamine/asparagine-rich domains in eukaryotic proteomes. Genome Biol. 2003, 4:R40.
-
(2003)
Genome Biol.
, vol.4
-
-
Harrison, P.M.1
Gerstein, M.2
-
24
-
-
68749093787
-
Predicting intrinsic disorder in proteins: an overview
-
He B., Wang K., Liu Y., Xue B., Uversky V.N., Dunker A.K. Predicting intrinsic disorder in proteins: an overview. Cell Res. 2009, 19:929-949.
-
(2009)
Cell Res.
, vol.19
, pp. 929-949
-
-
He, B.1
Wang, K.2
Liu, Y.3
Xue, B.4
Uversky, V.N.5
Dunker, A.K.6
-
25
-
-
0035543109
-
The architecture of parallel beta-helices and related folds
-
Jenkins J., Pickersgill R. The architecture of parallel beta-helices and related folds. Prog. Biophys. Mol. Biol. 2001, 77:111-175.
-
(2001)
Prog. Biophys. Mol. Biol.
, vol.77
, pp. 111-175
-
-
Jenkins, J.1
Pickersgill, R.2
-
26
-
-
0242668337
-
Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis
-
Kayed R., Head E., Thompson J.L., McIntire T.M., Milton S.C., Cotman C.W., Glabe C.G. Common structure of soluble amyloid oligomers implies common mechanism of pathogenesis. Science 2003, 300:486-489.
-
(2003)
Science
, vol.300
, pp. 486-489
-
-
Kayed, R.1
Head, E.2
Thompson, J.L.3
McIntire, T.M.4
Milton, S.C.5
Cotman, C.W.6
Glabe, C.G.7
-
27
-
-
77955005998
-
In vivo evidence for the fibrillar structures of Sup35 prions in yeast cells
-
Kawai-Noma S., Pack C.G., Kojidani T., Asakawa H., Hiraoka Y., Kinjo M., Haraguchi T., Taguchi H., Hirata A. In vivo evidence for the fibrillar structures of Sup35 prions in yeast cells. J. Cell Biol. 2010, 190:223-231.
-
(2010)
J. Cell Biol.
, vol.190
, pp. 223-231
-
-
Kawai-Noma, S.1
Pack, C.G.2
Kojidani, T.3
Asakawa, H.4
Hiraoka, Y.5
Kinjo, M.6
Haraguchi, T.7
Taguchi, H.8
Hirata, A.9
-
28
-
-
33846160381
-
Polymorphism in the intermediates and products of amyloid assembly
-
Kodali R., Wetzel R. Polymorphism in the intermediates and products of amyloid assembly. Curr. Opin. Struct. Biol. 2007, 17:48-57.
-
(2007)
Curr. Opin. Struct. Biol.
, vol.17
, pp. 48-57
-
-
Kodali, R.1
Wetzel, R.2
-
29
-
-
20444474976
-
Structural insights into a yeast prion illuminate nucleation and strain diversity
-
Krishnan R., Lindquist S.L. Structural insights into a yeast prion illuminate nucleation and strain diversity. Nature 2005, 435:765-772.
-
(2005)
Nature
, vol.435
, pp. 765-772
-
-
Krishnan, R.1
Lindquist, S.L.2
-
30
-
-
0034652127
-
Aggregation of huntingtin in yeast varies with the length of the polyglutamine expansion and the expression of chaperone proteins
-
Krobitsch S., Lindquist S. Aggregation of huntingtin in yeast varies with the length of the polyglutamine expansion and the expression of chaperone proteins. Proc. Natl. Acad. Sci. USA 2000, 97:1589-1594.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 1589-1594
-
-
Krobitsch, S.1
Lindquist, S.2
-
31
-
-
1542782213
-
Yeast [PSI+] prion aggregates are formed by small Sup35 polymers fragmented by Hsp104
-
Kryndushkin D.S., Alexandrov I.M., Ter-Avanesyan M.D., Kushnirov V.V. Yeast [PSI+] prion aggregates are formed by small Sup35 polymers fragmented by Hsp104. J. Biol. Chem. 2003, 278:49636-49643.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 49636-49643
-
-
Kryndushkin, D.S.1
Alexandrov, I.M.2
Ter-Avanesyan, M.D.3
Kushnirov, V.V.4
-
32
-
-
77749271373
-
The spontaneous appearance rate of the yeast prion [PSI+] and its implications for the evolution of the evolvability properties of the [PSI+] system
-
Lancaster A.K., Bardill J.P., True H.L., Masel J. The spontaneous appearance rate of the yeast prion [PSI+] and its implications for the evolution of the evolvability properties of the [PSI+] system. Genetics 2010, 184:393-400.
-
(2010)
Genetics
, vol.184
, pp. 393-400
-
-
Lancaster, A.K.1
Bardill, J.P.2
True, H.L.3
Masel, J.4
-
33
-
-
36048943076
-
Amyloid adhesins are abundant in natural biofilms
-
Larsen P., Nielsen J.L., Dueholm M.S., Wetzel R., Otzen D., Nielsen P.H. Amyloid adhesins are abundant in natural biofilms. Environ. Microbiol. 2007, 9:3077-3090.
-
(2007)
Environ. Microbiol.
, vol.9
, pp. 3077-3090
-
-
Larsen, P.1
Nielsen, J.L.2
Dueholm, M.S.3
Wetzel, R.4
Otzen, D.5
Nielsen, P.H.6
-
34
-
-
0027502784
-
Thioflavine T interaction with synthetic Alzheimer's disease beta-amyloid peptides: detection of amyloid aggregation in solution
-
LeVine H. Thioflavine T interaction with synthetic Alzheimer's disease beta-amyloid peptides: detection of amyloid aggregation in solution. Protein Sci. 1993, 2:404-410.
-
(1993)
Protein Sci.
, vol.2
, pp. 404-410
-
-
LeVine, H.1
-
35
-
-
0026356891
-
Predicting coiled coils from protein sequences
-
Lupas A., Van Dyke M., Stock J. Predicting coiled coils from protein sequences. Science 1991, 252:1162-1164.
-
(1991)
Science
, vol.252
, pp. 1162-1164
-
-
Lupas, A.1
Van Dyke, M.2
Stock, J.3
-
36
-
-
32144456009
-
Paircoil2: improved prediction of coiled coils from sequence
-
McDonnell A.V., Jiang T., Keating A.E., Berger B. Paircoil2: improved prediction of coiled coils from sequence. Bioinformatics 2006, 22:356-358.
-
(2006)
Bioinformatics
, vol.22
, pp. 356-358
-
-
McDonnell, A.V.1
Jiang, T.2
Keating, A.E.3
Berger, B.4
-
37
-
-
0037053566
-
Huntington toxicity in yeast model depends on polyglutamine aggregation mediated by a prion-like protein Rnq1
-
Meriin A.B., Zhang X., He X., Newnam G.P., Chernoff Y.O., Sherman M.Y. Huntington toxicity in yeast model depends on polyglutamine aggregation mediated by a prion-like protein Rnq1. J. Cell Biol. 2002, 157:997-1004.
-
(2002)
J. Cell Biol.
, vol.157
, pp. 997-1004
-
-
Meriin, A.B.1
Zhang, X.2
He, X.3
Newnam, G.P.4
Chernoff, Y.O.5
Sherman, M.Y.6
-
38
-
-
34249810658
-
Endocytosis machinery is involved in aggregation of proteins with expanded polyglutamine domains
-
Meriin A.B., Zhang X., Alexandrov I.M., Salnikova A.B., Ter-Avanesian M.D., Chernoff Y.O., Sherman M.Y. Endocytosis machinery is involved in aggregation of proteins with expanded polyglutamine domains. FASEB J. 2007, 21:1915-1925.
-
(2007)
FASEB J.
, vol.21
, pp. 1915-1925
-
-
Meriin, A.B.1
Zhang, X.2
Alexandrov, I.M.3
Salnikova, A.B.4
Ter-Avanesian, M.D.5
Chernoff, Y.O.6
Sherman, M.Y.7
-
39
-
-
0034710897
-
A census of glutamine/asparagine-rich regions: implications for their conserved function and the prediction of novel prions
-
Michelitsch M.D., Weissman J.S. A census of glutamine/asparagine-rich regions: implications for their conserved function and the prediction of novel prions. Proc. Natl. Acad. Sci. USA 2000, 97:11910-11915.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 11910-11915
-
-
Michelitsch, M.D.1
Weissman, J.S.2
-
40
-
-
33847324863
-
A natively unfolded yeast prion monomer adopts an ensemble of collapsed and rapidly fluctuating structures
-
Mukhopadhyay S., Krishnan R., Lemke E.A., Lindquist S., Deniz A.A. A natively unfolded yeast prion monomer adopts an ensemble of collapsed and rapidly fluctuating structures. Proc. Natl. Acad. Sci. USA 2007, 104:2649-2654.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 2649-2654
-
-
Mukhopadhyay, S.1
Krishnan, R.2
Lemke, E.A.3
Lindquist, S.4
Deniz, A.A.5
-
41
-
-
33645995764
-
Recent atomic models of amyloid fibril structure
-
Nelson R., Eisenberg D. Recent atomic models of amyloid fibril structure. Curr. Opin. Struct. Biol. 2006, 16:260-265.
-
(2006)
Curr. Opin. Struct. Biol.
, vol.16
, pp. 260-265
-
-
Nelson, R.1
Eisenberg, D.2
-
43
-
-
36749056299
-
A polymer physics perspective on driving forces and mechanisms for protein aggregation
-
Pappu R.V., Wang X., Vitalis A., Crick S.L. A polymer physics perspective on driving forces and mechanisms for protein aggregation. Arch. Biochem. Biophys. 2008, 469:132-141.
-
(2008)
Arch. Biochem. Biophys.
, vol.469
, pp. 132-141
-
-
Pappu, R.V.1
Wang, X.2
Vitalis, A.3
Crick, S.L.4
-
44
-
-
61849091420
-
The yeast global transcriptional co-repressor protein Cyc8 can propagate as a prion
-
Patel B.K., Gavin-Smyth J., Liebman S.W. The yeast global transcriptional co-repressor protein Cyc8 can propagate as a prion. Nat. Cell Biol. 2009, 11:344-349.
-
(2009)
Nat. Cell Biol.
, vol.11
, pp. 344-349
-
-
Patel, B.K.1
Gavin-Smyth, J.2
Liebman, S.W.3
-
45
-
-
0035849879
-
Cause of neural death in neurodegenerative diseases attributable to expansion of glutamine repeats
-
Perutz M.F., Windle A.H. Cause of neural death in neurodegenerative diseases attributable to expansion of glutamine repeats. Nature 2001, 412:143-144.
-
(2001)
Nature
, vol.412
, pp. 143-144
-
-
Perutz, M.F.1
Windle, A.H.2
-
46
-
-
0037117499
-
Aggregation of proteins with expanded glutamine and alanine repeats of the glutamine-rich and asparagine-rich domains of Sup35 and of the amyloid beta-peptide of amyloid plaques
-
Perutz M.F., Pope B.J., Owen D., Wanker E.E., Scherzinger E. Aggregation of proteins with expanded glutamine and alanine repeats of the glutamine-rich and asparagine-rich domains of Sup35 and of the amyloid beta-peptide of amyloid plaques. Proc. Natl. Acad. Sci. USA 2002, 99:5596-5600.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 5596-5600
-
-
Perutz, M.F.1
Pope, B.J.2
Owen, D.3
Wanker, E.E.4
Scherzinger, E.5
-
47
-
-
11844257556
-
Is the prion domain of soluble Ure2p unstructured?
-
Pierce M.M., Baxa U., Steven A.C., Bax A., Wickner R.B. Is the prion domain of soluble Ure2p unstructured?. Biochemistry 2005, 44:321-328.
-
(2005)
Biochemistry
, vol.44
, pp. 321-328
-
-
Pierce, M.M.1
Baxa, U.2
Steven, A.C.3
Bax, A.4
Wickner, R.B.5
-
48
-
-
33847795359
-
Intrinsic disorder and functional proteomics
-
Radivojac P., Iakoucheva L.M., Oldfield C.J., Obradovic Z., Uversky V.N., Dunker A.K. Intrinsic disorder and functional proteomics. Biophys. J. 2007, 92:1439-1456.
-
(2007)
Biophys. J.
, vol.92
, pp. 1439-1456
-
-
Radivojac, P.1
Iakoucheva, L.M.2
Oldfield, C.J.3
Obradovic, Z.4
Uversky, V.N.5
Dunker, A.K.6
-
49
-
-
0035188314
-
Sequence complexity of disordered protein
-
Romero P., Obradovic Z., Li X., Garner E.C., Brown C.J., Dunker A.K. Sequence complexity of disordered protein. Proteins 2001, 42:38-48.
-
(2001)
Proteins
, vol.42
, pp. 38-48
-
-
Romero, P.1
Obradovic, Z.2
Li, X.3
Garner, E.C.4
Brown, C.J.5
Dunker, A.K.6
-
50
-
-
24644444562
-
Primary sequence independence for prion formation
-
Ross E.D., Edskes H.K., Terry M.J., Wickner R.B. Primary sequence independence for prion formation. Proc. Natl. Acad. Sci. USA 2005, 102:12825-12830.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 12825-12830
-
-
Ross, E.D.1
Edskes, H.K.2
Terry, M.J.3
Wickner, R.B.4
-
51
-
-
33644817188
-
Prion domains: sequences, structures and interactions
-
Ross E.D., Minton A., Wickner R.B. Prion domains: sequences, structures and interactions. Nat. Cell Biol. 2005, 7:1039-1044.
-
(2005)
Nat. Cell Biol.
, vol.7
, pp. 1039-1044
-
-
Ross, E.D.1
Minton, A.2
Wickner, R.B.3
-
52
-
-
74949101025
-
Regulation of synaptic Pumilio function by an aggregation-prone domain
-
Salazar A.M., Silverman E.J., Menon K.P., Zinn K. Regulation of synaptic Pumilio function by an aggregation-prone domain. J. Neurosci. 2010, 30:515-522.
-
(2010)
J. Neurosci.
, vol.30
, pp. 515-522
-
-
Salazar, A.M.1
Silverman, E.J.2
Menon, K.P.3
Zinn, K.4
-
53
-
-
0034714351
-
Nucleated conformational conversion and the replication of conformational information by a prion determinant
-
Serio T.R., Cashikar A.G., Kowal A.S., Sawicki G.J., Moslehi J.J., Serpell L., Arnsdorf M.F., Lindquist S.L. Nucleated conformational conversion and the replication of conformational information by a prion determinant. Science 2000, 289:1317-1321.
-
(2000)
Science
, vol.289
, pp. 1317-1321
-
-
Serio, T.R.1
Cashikar, A.G.2
Kowal, A.S.3
Sawicki, G.J.4
Moslehi, J.J.5
Serpell, L.6
Arnsdorf, M.F.7
Lindquist, S.L.8
-
54
-
-
69949163540
-
The functional curli amyloid is not based on in-register parallel beta-sheet structure
-
Shewmaker F., McGlinchey R.P., Thurber K.R., McPhie P., Dyda F., Tycko R., Wickner R.B. The functional curli amyloid is not based on in-register parallel beta-sheet structure. J. Biol. Chem. 2009, 284:25065-25076.
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 25065-25076
-
-
Shewmaker, F.1
McGlinchey, R.P.2
Thurber, K.R.3
McPhie, P.4
Dyda, F.5
Tycko, R.6
Wickner, R.B.7
-
55
-
-
2942722444
-
Hsp104 catalyzes formation and elimination of self-replicating Sup35 prion conformers
-
Shorter J., Lindquist S. Hsp104 catalyzes formation and elimination of self-replicating Sup35 prion conformers. Science 2004, 304:1793-1797.
-
(2004)
Science
, vol.304
, pp. 1793-1797
-
-
Shorter, J.1
Lindquist, S.2
-
56
-
-
0348077417
-
A neuronal isoform of the aplysia CPEB has prion-like properties
-
Si K., Lindquist S., Kandel E.R. A neuronal isoform of the aplysia CPEB has prion-like properties. Cell 2003, 115:879-891.
-
(2003)
Cell
, vol.115
, pp. 879-891
-
-
Si, K.1
Lindquist, S.2
Kandel, E.R.3
-
57
-
-
4644370187
-
Hyper-expansion of asparagines correlates with an abundance of proteins with prion-like domains in Plasmodium falciparum
-
Singh G.P., Chandra B.R., Bhattacharya A., Akhouri R.R., Singh S.K., Sharma A. Hyper-expansion of asparagines correlates with an abundance of proteins with prion-like domains in Plasmodium falciparum. Mol. Biochem. Parasitol. 2004, 137:307-319.
-
(2004)
Mol. Biochem. Parasitol.
, vol.137
, pp. 307-319
-
-
Singh, G.P.1
Chandra, B.R.2
Bhattacharya, A.3
Akhouri, R.R.4
Singh, S.K.5
Sharma, A.6
-
58
-
-
38349158062
-
Soluble polyglutamine oligomers formed prior to inclusion body formation are cytotoxic
-
Takahashi T., Kikuchi S., Katada S., Nagai Y., Nishizawa M., Onodera O. Soluble polyglutamine oligomers formed prior to inclusion body formation are cytotoxic. Hum. Mol. Genet. 2008, 17:345-356.
-
(2008)
Hum. Mol. Genet.
, vol.17
, pp. 345-356
-
-
Takahashi, T.1
Kikuchi, S.2
Katada, S.3
Nagai, Y.4
Nishizawa, M.5
Onodera, O.6
-
59
-
-
45749102914
-
The Zyggregator method for predicting protein aggregation propensities
-
Tartaglia G.G., Vendruscolo M. The Zyggregator method for predicting protein aggregation propensities. Chem. Soc. Rev. 2008, 37:1395-1401.
-
(2008)
Chem. Soc. Rev.
, vol.37
, pp. 1395-1401
-
-
Tartaglia, G.G.1
Vendruscolo, M.2
-
60
-
-
66849099684
-
Unraveling infectious structures, strain variants and species barriers for the yeast prion [PSI+]
-
Tessier P.M., Lindquist S. Unraveling infectious structures, strain variants and species barriers for the yeast prion [PSI+]. Nat. Struct. Mol. Biol. 2009, 16:598-605.
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 598-605
-
-
Tessier, P.M.1
Lindquist, S.2
-
61
-
-
33644849671
-
Transcriptional activators in yeast
-
Titz B., Thomas S., Rajagopala S.V., Chiba T., Ito T., Uetz P. Transcriptional activators in yeast. Nucleic Acids Res. 2006, 34:955-967.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 955-967
-
-
Titz, B.1
Thomas, S.2
Rajagopala, S.V.3
Chiba, T.4
Ito, T.5
Uetz, P.6
-
62
-
-
73549115633
-
Compositional determinants of prion formation in yeast
-
Toombs J.A., McCarty B.R., Ross E.D. Compositional determinants of prion formation in yeast. Mol. Cell. Biol. 2010, 30:319-332.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 319-332
-
-
Toombs, J.A.1
McCarty, B.R.2
Ross, E.D.3
-
63
-
-
66749115386
-
Amyloid deposits: protection against toxic protein species?
-
Treusch S., Cyr D.M., Lindquist S. Amyloid deposits: protection against toxic protein species?. Cell Cycle 2009, 8:1668-1674.
-
(2009)
Cell Cycle
, vol.8
, pp. 1668-1674
-
-
Treusch, S.1
Cyr, D.M.2
Lindquist, S.3
-
64
-
-
49349110821
-
Huntington's disease: revisiting the aggregation hypothesis in polyglutamine neurodegenerative diseases
-
Truant R., Atwal R.S., Desmond C., Munsie L., Tran T. Huntington's disease: revisiting the aggregation hypothesis in polyglutamine neurodegenerative diseases. FEBS J. 2008, 275:4252-4262.
-
(2008)
FEBS J.
, vol.275
, pp. 4252-4262
-
-
Truant, R.1
Atwal, R.S.2
Desmond, C.3
Munsie, L.4
Tran, T.5
-
65
-
-
0034727077
-
A yeast prion provides a mechanism for genetic variation and phenotypic diversity
-
True H.L., Lindquist S.L. A yeast prion provides a mechanism for genetic variation and phenotypic diversity. Nature 2000, 407:477-483.
-
(2000)
Nature
, vol.407
, pp. 477-483
-
-
True, H.L.1
Lindquist, S.L.2
-
66
-
-
77954217602
-
The protein kingdom extended: ordered and intrinsically disordered proteins, their folding, supramolecular complex formation, and aggregation
-
Turoverov K.K., Kuznetsova I.M., Uversky V.N. The protein kingdom extended: ordered and intrinsically disordered proteins, their folding, supramolecular complex formation, and aggregation. Prog. Biophys. Mol. Biol. 2010, 102:73-84.
-
(2010)
Prog. Biophys. Mol. Biol.
, vol.102
, pp. 73-84
-
-
Turoverov, K.K.1
Kuznetsova, I.M.2
Uversky, V.N.3
-
67
-
-
77952711519
-
Prion induction involves an ancient system for the sequestration of aggregated proteins and heritable changes in prion fragmentation
-
Tyedmers J., Treusch S., Dong J., McCaffery J.M., Bevis B., Lindquist S. Prion induction involves an ancient system for the sequestration of aggregated proteins and heritable changes in prion fragmentation. Proc. Natl. Acad. Sci. USA 2010, 107:8633-8638.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 8633-8638
-
-
Tyedmers, J.1
Treusch, S.2
Dong, J.3
McCaffery, J.M.4
Bevis, B.5
Lindquist, S.6
-
68
-
-
45449091418
-
Amyloidogenesis of natively unfolded proteins
-
Uversky V.N. Amyloidogenesis of natively unfolded proteins. Curr. Alzheimer Res. 2008, 5:260-287.
-
(2008)
Curr. Alzheimer Res.
, vol.5
, pp. 260-287
-
-
Uversky, V.N.1
-
69
-
-
67649635978
-
Intrinsic protein disorder and interaction promiscuity are widely associated with dosage sensitivity
-
Vavouri T., Semple J.I., Garcia-Verdugo R., Lehner B. Intrinsic protein disorder and interaction promiscuity are widely associated with dosage sensitivity. Cell 2009, 138:198-208.
-
(2009)
Cell
, vol.138
, pp. 198-208
-
-
Vavouri, T.1
Semple, J.I.2
Garcia-Verdugo, R.3
Lehner, B.4
-
70
-
-
68949127591
-
Thermodynamics of beta-sheet formation in polyglutamine
-
Vitalis A., Lyle N., Pappu R.V. Thermodynamics of beta-sheet formation in polyglutamine. Biophys. J. 2009, 97:303-311.
-
(2009)
Biophys. J.
, vol.97
, pp. 303-311
-
-
Vitalis, A.1
Lyle, N.2
Pappu, R.V.3
-
71
-
-
34548757409
-
Quantitative characterization of intrinsic disorder in polyglutamine: insights from analysis based on polymer theories
-
Vitalis A., Wang X., Pappu R.V. Quantitative characterization of intrinsic disorder in polyglutamine: insights from analysis based on polymer theories. Biophys. J. 2007, 93:1923-1937.
-
(2007)
Biophys. J.
, vol.93
, pp. 1923-1937
-
-
Vitalis, A.1
Wang, X.2
Pappu, R.V.3
-
72
-
-
54249132105
-
Atomistic simulations of the effects of polyglutamine chain length and solvent quality on conformational equilibria and spontaneous homodimerization
-
Vitalis A., Wang X., Pappu R.V. Atomistic simulations of the effects of polyglutamine chain length and solvent quality on conformational equilibria and spontaneous homodimerization. J. Mol. Biol. 2008, 384:279-297.
-
(2008)
J. Mol. Biol.
, vol.384
, pp. 279-297
-
-
Vitalis, A.1
Wang, X.2
Pappu, R.V.3
-
73
-
-
70349838220
-
Examining polyglutamine peptide length: a connection between collapsed conformations and increased aggregation
-
Walters R.H., Murphy R.M. Examining polyglutamine peptide length: a connection between collapsed conformations and increased aggregation. J. Mol. Biol. 2009, 393:978-992.
-
(2009)
J. Mol. Biol.
, vol.393
, pp. 978-992
-
-
Walters, R.H.1
Murphy, R.M.2
-
74
-
-
33645281939
-
Characterizing the conformational ensemble of monomeric polyglutamine
-
Wang X., Vitalis A., Wyczalkowski M.A., Pappu R.V. Characterizing the conformational ensemble of monomeric polyglutamine. Proteins 2006, 63:297-311.
-
(2006)
Proteins
, vol.63
, pp. 297-311
-
-
Wang, X.1
Vitalis, A.2
Wyczalkowski, M.A.3
Pappu, R.V.4
-
75
-
-
40849120669
-
Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core
-
Wasmer C., Lange A., Van Melckebeke H., Siemer A.B., Riek R., Meier B.H. Amyloid fibrils of the HET-s(218-289) prion form a beta solenoid with a triangular hydrophobic core. Science 2008, 319:1523-1526.
-
(2008)
Science
, vol.319
, pp. 1523-1526
-
-
Wasmer, C.1
Lange, A.2
Van Melckebeke, H.3
Siemer, A.B.4
Riek, R.5
Meier, B.H.6
-
76
-
-
6344277430
-
Reduced amino acid alphabet is sufficient to accurately recognize intrinsically disordered protein
-
Weathers E.A., Paulaitis M.E., Woolf T.B., Hoh J.H. Reduced amino acid alphabet is sufficient to accurately recognize intrinsically disordered protein. FEBS Lett. 2004, 576:348-352.
-
(2004)
FEBS Lett.
, vol.576
, pp. 348-352
-
-
Weathers, E.A.1
Paulaitis, M.E.2
Woolf, T.B.3
Hoh, J.H.4
-
77
-
-
77649271684
-
Modulation of polyglutamine conformations and dimer formation by the N-terminus of huntingtin
-
Williamson T.E., Vitalis A., Crick S.L., Pappu R.V. Modulation of polyglutamine conformations and dimer formation by the N-terminus of huntingtin. J. Mol. Biol. 2010, 396:1295-1309.
-
(2010)
J. Mol. Biol.
, vol.396
, pp. 1295-1309
-
-
Williamson, T.E.1
Vitalis, A.2
Crick, S.L.3
Pappu, R.V.4
-
78
-
-
0032483427
-
Glutamine-rich domains activate transcription in yeast Saccharomyces cerevisiae
-
Xiao H., Jeang K.T. Glutamine-rich domains activate transcription in yeast Saccharomyces cerevisiae. J. Biol. Chem. 1998, 273:22873-22876.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 22873-22876
-
-
Xiao, H.1
Jeang, K.T.2
-
79
-
-
58749109622
-
Simulations of nucleation and elongation of amyloid fibrils
-
Zhang J., Muthukumar M. Simulations of nucleation and elongation of amyloid fibrils. J. Chem. Phys. 2009, 130:035102.
-
(2009)
J. Chem. Phys.
, vol.130
, pp. 035102
-
-
Zhang, J.1
Muthukumar, M.2
|