메뉴 건너뛰기




Volumn 30, Issue 7, 2011, Pages 1427-1438

Accelerating image registration with the Johnson-Lindenstrauss Lemma: Application to imaging 3-D neural ultrastructure with electron microscopy

Author keywords

Electron microscopy; image registration

Indexed keywords

3-D IMAGE; COMPUTATION TIME; CORRESPONDENCE DETECTION; FEATURE BASED REGISTRATION; GLOBAL SEARCH; IMAGING PROCESS; JOHNSON-LINDENSTRAUSS LEMMATA; NON-RIGID TRANSFORMATION; NOVEL ALGORITHM; ROBUST ESTIMATION; TEM IMAGES; TISSUE FIXATION;

EID: 79959794817     PISSN: 02780062     EISSN: None     Source Type: Journal    
DOI: 10.1109/TMI.2011.2125797     Document Type: Article
Times cited : (12)

References (46)
  • 1
    • 0032008619 scopus 로고    scopus 로고
    • A survey of medical image registration
    • J. Maintz and M. Viergever, "A survey of medical image registration," Med. ImageAnal., vol. 2, no. 1, pp. 1-16, 1998.
    • (1998) Med. ImageAnal. , vol.2 , Issue.1 , pp. 1-16
    • Maintz, J.1    Viergever, M.2
  • 2
    • 14044262855 scopus 로고    scopus 로고
    • Serial block-face scanning electron mi- croscopy to reconstruct three-dimensional tissue nanostructure
    • W. Denk and H. Horstmann, "Serial block-face scanning electron mi- croscopy to reconstruct three-dimensional tissue nanostructure," PLoS Biol., vol. 2, pp. 329-329, 2004.
    • (2004) PLoS Biol. , vol.2 , pp. 329-329
    • Denk, W.1    Horstmann, H.2
  • 3
    • 33749050824 scopus 로고    scopus 로고
    • Towards neural circuit reconstruction with volume electron microscopy techniques
    • DOI 10.1016/j.conb.2006.08.010, PII S0959438806001140, Neuronal and Glial Cell Biology / New Technologies
    • K. Briggman and W. Denk, "Towards neural circuit reconstruction with volume electron microscopy techniques," Current Opinion Neurobiol., vol. 16, no. 5, pp. 562-570, 2006. (Pubitemid 44466398)
    • (2006) Current Opinion in Neurobiology , vol.16 , Issue.5 , pp. 562-570
    • Briggman, K.L.1    Denk, W.2
  • 4
    • 35748936154 scopus 로고    scopus 로고
    • Following the wires
    • N. Blow, "Following the wires," Nature Methods, vol. 4, no. 11, pp. 975-980, 2007.
    • (2007) Nature Methods , vol.4 , Issue.11 , pp. 975-980
    • Blow, N.1
  • 5
    • 34250892420 scopus 로고    scopus 로고
    • Array Tomography: A New Tool for Imaging the Molecular Architecture and Ultrastructure of Neural Circuits
    • DOI 10.1016/j.neuron.2007.06.014, PII S0896627307004412
    • K. Micheva and S. J. Smith, "Array tomography: A new tool for imaging the molecular architecture and ultrastructure of neural cir- cuits," Neuron, vol. 55, no. 1, pp. 25-36, 2007. (Pubitemid 46990817)
    • (2007) Neuron , vol.55 , Issue.1 , pp. 25-36
    • Micheva, K.D.1    Smith, S.J.2
  • 7
    • 77953689289 scopus 로고    scopus 로고
    • Fully automatic stitching and distortion correction of transmission electron microscope images
    • V. Kaynig, B. Fischer, E. Müller, and J. Buhmann, "Fully automatic stitching and distortion correction of transmission electron microscope images,"J. StructuralBiol., vol. 171, no. 2,pp. 163-173, 2010.
    • (2010) J. StructuralBiol. , vol.171 , Issue.2 , pp. 163-173
    • Kaynig, V.1    Fischer, B.2    Müller, E.3    Buhmann, J.4
  • 9
    • 37549028828 scopus 로고    scopus 로고
    • Circuit reconstruction tools today
    • S. J. Smith, "Circuit reconstruction tools today," Current Opinion Neurobiol., vol. 17, no. 5, 2007.
    • (2007) Current Opinion Neurobiol. , vol.17 , Issue.5
    • Smith, S.J.1
  • 11
    • 57749197806 scopus 로고    scopus 로고
    • Automation of 3-D reconstruction of neural tissue from large volume of conventional serial section transmission elec- tron micrographs
    • Y. Mishchenko, "Automation of 3-D reconstruction of neural tissue from large volume of conventional serial section transmission elec- tron micrographs," J. Neurosci. Methods, vol. 176, no. 2, pp. 276-289, 2009.
    • (2009) J. Neurosci. Methods , vol.176 , Issue.2 , pp. 276-289
    • Mishchenko, Y.1
  • 15
    • 41149120500 scopus 로고    scopus 로고
    • Serial section scan- ning electron microscopy of adult brain tissue using focused ion beam milling
    • G. Knott, H. Marchman, D. Wall, and B. Lich, "Serial section scan- ning electron microscopy of adult brain tissue using focused ion beam milling," J. Neurosci., vol. 28, no. 12, pp. 2959-2959, 2008.
    • (2008) J. Neurosci. , vol.28 , Issue.12 , pp. 2959-2959
    • Knott, G.1    Marchman, H.2    Wall, D.3    Lich, B.4
  • 16
    • 0035152169 scopus 로고    scopus 로고
    • Reconstructing a 3D structure from serial histological sections
    • DOI 10.1016/S0262-8856(00)00052-4
    • S. Ourselin, A. Roche, G. Subsol, X. Pennec, and N. Ayache, "Recon- structing a 3-D structure from serial histological sections," Image Vis. Comput., vol. 19, pp. 25-31, 2001. (Pubitemid 32033991)
    • (2001) Image and Vision Computing , vol.19 , Issue.1-2 , pp. 25-31
    • Ourselin, S.1    Roche, A.2    Subsol, G.3    Pennec, X.4    Ayache, N.5
  • 18
    • 3042535216 scopus 로고    scopus 로고
    • Distinctive image features from scale-invariant key-points
    • D. Lowe, "Distinctive image features from scale-invariant key-points," Int. J. Comput. Vis., vol. 60, pp. 91-110, 2004.
    • (2004) Int. J. Comput. Vis. , vol.60 , pp. 91-110
    • Lowe, D.1
  • 22
  • 23
    • 0026821209 scopus 로고
    • A method for registration of 3-d shapes
    • Feb.
    • P. Besl and N. McKay, "A method for registration of 3-d shapes," IEEE Trans. Pattern Anal. Mach. Intell., vol. 14, no. 2, pp. 239-256, Feb. 1992.
    • (1992) IEEE Trans. Pattern Anal. Mach. Intell. , vol.14 , Issue.2 , pp. 239-256
    • Besl, P.1    McKay, N.2
  • 24
    • 23044533468 scopus 로고    scopus 로고
    • Multi-scale EM-ICP: A fast and robust approach for surface registration
    • S. Granger and X. Pennec, "Multi-scale EM-ICP: A fast and robust approach for surface registration," Proc. ECCV, vol. 4, pp. 418-432, 2002.
    • (2002) Proc. ECCV , vol.4 , pp. 418-432
    • Granger, S.1    Pennec, X.2
  • 25
    • 0042904903 scopus 로고    scopus 로고
    • A new point matching for non-rigid regis- tration
    • H. Chui and A. Rangarajan, "A new point matching for non-rigid regis- tration," Comput. Vis. Image Understand., vol. 89, pp. 114-141, 2003.
    • (2003) Comput. Vis. Image Understand. , vol.89 , pp. 114-141
    • Chui, H.1    Rangarajan, A.2
  • 26
    • 0036891787 scopus 로고    scopus 로고
    • Variational methods for multimodal image matching
    • DOI 10.1023/A:1020830525823
    • G. Hermosillo, C. C. d'Hotel, and O. Faugeras, "Variational methods for multimodal image matching," Int. J. Comput. Vis., vol. 50, no. 3, pp. 329-343, 2002. (Pubitemid 35377419)
    • (2002) International Journal of Computer Vision , vol.50 , Issue.3 , pp. 329-343
    • Hermosillo, G.1    Chefd, C.2    Faugeras, O.3
  • 28
    • 0036557904 scopus 로고    scopus 로고
    • Consistent landmark and intensity-based image registration
    • DOI 10.1109/TMI.2002.1009381, PII S0278006202055301
    • H. Johnson and G. Christensen, "Consistent landmark and intensity- based image registration," IEEE Trans. Med. Imag., vol. 21, no. 5, pp. 450-461, May 2002. (Pubitemid 34979822)
    • (2002) IEEE Transactions on Medical Imaging , vol.21 , Issue.5 , pp. 450-461
    • Johnson, H.J.1    Christensen, G.E.2
  • 30
    • 78449244121 scopus 로고    scopus 로고
    • A curvelet-based patient- specific prior for accurate multi-modal brain image rigid registration
    • M. Freiman, M. Werman, and L. Joskowicz, "A curvelet-based patient- specific prior for accurate multi-modal brain image rigid registration," Med. ImageAnal., vol. 15, no. 1, pp. 125-132, 2011.
    • (2011) Med. ImageAnal. , vol.15 , Issue.1 , pp. 125-132
    • Freiman, M.1    Werman, M.2    Joskowicz, L.3
  • 32
    • 0043028206 scopus 로고    scopus 로고
    • Mutual-information- based registration of medical images: A survey
    • Aug.
    • J. P. Pluim, J. B. Maintz, and M. A. Viergever, "Mutual-information- based registration of medical images: A survey," IEEE Trans. Med. Imag., vol. 22, no. 8, pp. 986-1004, Aug. 2003.
    • (2003) IEEE Trans. Med. Imag. , vol.22 , Issue.8 , pp. 986-1004
    • Pluim, J.P.1    Maintz, J.B.2    Viergever, M.A.3
  • 33
    • 78650181934 scopus 로고    scopus 로고
    • A reproducible evaluation of ants similarity metric performance in brain imageregistration
    • B. Avants, N. Tustison, G. Song, P. Cook, A. Klein, and J. Gee, "A reproducible evaluation of ants similarity metric performance in brain imageregistration," Neuro Image, vol. 54, no. 3, pp. 2033-2044, 2010.
    • (2010) Neuro Image , vol.54 , Issue.3 , pp. 2033-2044
    • Avants, B.1    Tustison, N.2    Song, G.3    Cook, P.4    Klein, A.5    Gee, J.6
  • 34
    • 0001654702 scopus 로고
    • Extensions of Lipschitz mapping into a Hilbert space
    • W. Johnson and J. Lindenstrauss, "Extensions of Lipschitz mapping into a Hilbert space," Contemp. Math., vol. 26, pp. 189-206, 1984.
    • (1984) Contemp. Math. , vol.26 , pp. 189-206
    • Johnson, W.1    Lindenstrauss, J.2
  • 37
    • 0038166193 scopus 로고    scopus 로고
    • Database-friendly random projections: Johnson-Lin- denstrauss with binary coins
    • D. Achlioptas, "Database-friendly random projections: Johnson-Lin- denstrauss with binary coins," J. Comput. Syst. Sci., vol. 66, pp. 671-687, 2003.
    • (2003) J. Comput. Syst. Sci. , vol.66 , pp. 671-687
    • Achlioptas, D.1
  • 38
    • 51849136504 scopus 로고    scopus 로고
    • Dense fast random projections and lean Walsh transforms
    • E. Liberty, N. Ailon, and A. Singer, "Dense fast random projections and lean Walsh transforms," in APPROX-RANDOM, 2008, pp. 512-522.
    • (2008) APPROX-RANDOM , pp. 512-522
    • Liberty, E.1    Ailon, N.2    Singer, A.3
  • 39
    • 75749141980 scopus 로고    scopus 로고
    • Faster dimension reduction
    • N. Ailon and B. Chazelle, "Faster dimension reduction," Commun. ACM, vol. 53, pp. 97-104, 2010.
    • (2010) Commun. ACM , vol.53 , pp. 97-104
    • Ailon, N.1    Chazelle, B.2
  • 40
    • 84945709355 scopus 로고
    • An algorithm for finding best matches in logarithmic expected time
    • J. H. Friedman, J. L. Bentley, and R. A. Finkel, "An algorithm for finding best matches in logarithmic expected time," ACM Trans. Math. Software, vol. 3, no. 3, pp. 209-226, 1977.
    • (1977) ACM Trans. Math. Software , vol.3 , Issue.3 , pp. 209-226
    • Friedman, J.H.1    Bentley, J.L.2    Finkel, R.A.3
  • 41
    • 0032201716 scopus 로고    scopus 로고
    • An optimal algorithm for approximate nearest neighbor searching in fixed dimensions
    • S. Arya, D. Mount, N. Netanyahu, R. Silverman, and A. Wu, "An optimal algorithm for approximate nearest neighbor searching in fixed dimensions," J. ACM, vol. 45, no. 6, pp. 891-923, 1998.
    • (1998) J. ACM , vol.45 , Issue.6 , pp. 891-923
    • Arya, S.1    Mount, D.2    Netanyahu, N.3    Silverman, R.4    Wu, A.5
  • 42
    • 43349094027 scopus 로고    scopus 로고
    • Gener- ation of a statistical shape model with probabilistic point correspon- dences and EM-ICP
    • H. Hufnagel, N. A. X. Pennec, J. Ehrhardt, and H. Handels, "Gener- ation of a statistical shape model with probabilistic point correspon- dences and EM-ICP," Int. J. Comput. Assist. Radiol. Surg. (IJCARS), vol. 2, no. 5, pp. 265-273, 2008.
    • (2008) Int. J. Comput. Assist. Radiol. Surg. (IJCARS) , vol.2 , Issue.5 , pp. 265-273
    • Hufnagel, H.1    Pennec, N.A.X.2    Ehrhardt, J.3    Handels, H.4
  • 43
    • 59849118044 scopus 로고    scopus 로고
    • A fast and log-euclidean polyaffine framework for locally affine registration
    • V. Arsigny, O. Commowick, X. Pennec, and N. Ayache, "A fast and log-euclidean polyaffine framework for locally affine registration," J. Math. Imag. Vis., vol. 33, no. 2, pp. 222-238, 2009.
    • (2009) J. Math. Imag. Vis. , vol.33 , Issue.2 , pp. 222-238
    • Arsigny, V.1    Commowick, O.2    Pennec, X.3    Ayache, N.4
  • 45
    • 84975553202 scopus 로고
    • Closed-form solution of absolute orientation using unit quaternions
    • B. K. P. Horn, "Closed-form solution of absolute orientation using unit quaternions," J. Opt. Soc. Am., vol. 4, pp. 629-642, 1987.
    • (1987) J. Opt. Soc. Am. , vol.4 , pp. 629-642
    • Horn, B.K.P.1
  • 46
    • 37549058056 scopus 로고    scopus 로고
    • Near-optimal hashing algorithms for ap- proximate nearest neighbor in high dimensions
    • A. Andoni and P. Indyk, "Near-optimal hashing algorithms for ap- proximate nearest neighbor in high dimensions," Commun. ACM, pp. 117-122, 2008.
    • (2008) Commun. ACM , pp. 117-122
    • Andoni, A.1    Indyk, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.