Detection and characterization of spontaneous internal deletion mutants of Beet Necrotic yellow vein virus RNA3 from systemic host Nicotiana benthamiana

Virology Journal

Volumn 8, Issue , 2011, Pages

  Wang, Ying ^a   Fan, Huiyan ^a   Wang, Xian Bing ^a   Li, Min ^a   Han, Chenggui ^a   Li, Dawei ^a   Yu, Jialin ^a  

^a CHINA AGRICULTURAL UNIVERSITY   (China)

Author keywords

Beet Necrotic Yellow Vein virus(BNYVV); Defective RNA; N protein

Indexed keywords

D RNA 3ALPHA; D RNA 3BETA; D RNA 3GAMMA; D RNA3; PROTEIN P25; SINGLE STRANDED DNA; UNCLASSIFIED DRUG; VIRUS RNA; VIRULENCE FACTOR; VIRUS PROTEIN;

ARTICLE; BEET NECROTIC YELLOW VEIN VIRUS; DELETION MUTANT; IN VITRO STUDY; INOCULATION; NICOTIANA BENTHAMIANA; NONHUMAN; NORTHERN BLOTTING; PATHOGENICITY; PLANT DISEASE; PLANT VIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA EXTRACTION; VIRUS; VIRUS DETECTION; VIRUS IDENTIFICATION; VIRUS ISOLATION; AMINO ACID SEQUENCE; BEET; GENE DELETION; GENETICS; ISOLATION AND PURIFICATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; RNA VIRUS; TOBACCO; VIROLOGY; VIRULENCE; VIRUS REPLICATION;

BEET NECROTIC YELLOW VEIN VIRUS; BENYVIRUS; BETA VULGARIS SUBSP. VULGARIS; NICOTIANA BENTHAMIANA; RNA VIRUSES;

AMINO ACID SEQUENCE; BASE SEQUENCE; BETA VULGARIS; MOLECULAR SEQUENCE DATA; PLANT DISEASES; PLANT VIRUSES; RNA VIRUSES; RNA, VIRAL; SEQUENCE DELETION; TOBACCO; VIRAL PROTEINS; VIRULENCE; VIRULENCE FACTORS; VIRUS REPLICATION;

EID: 79959740854     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-8-335     Document Type: Article

References (38)

1. Plant virus satellite and defective interfering RNAs: new paradigms for a new century. AE Simon MJ Roossinck Z Havelda, Annu Rev Phytopathol 2004 42 415 437 10.1146/annurev.phyto.42.040803.140402 15283672 (Pubitemid 39308519)
2. Defective interfering RNAs and defective viruses associated with multipartite RNA viruses of plants. MV Graves J Pogany J Romero, Semin Virol 1996 7 399 408 10.1006/smvy.1996.0048 (Pubitemid 27153771)
3. Impact of a defective RNA 3 from cucumber mosaic virus on helper virus infection dynamics. M Takeshita Y Matsuo M Suzuki N Furuya K Tsuchiya Y Takanami, Virology 2009 389 59 65 10.1016/j.virol.2009.04.010 19427011
4. Deletion of internal sequences results in tobacco mosaic virus defective RNAs that accumulate to high levels without interfering with replication of the helper virus. D Lewandowski W Dawson, Virology 1998 251 427 437 10.1006/viro.1998.9420 9837806 (Pubitemid 28535911)
5. Ecology and epidemiology of benyviruses and plasmodiophorid vectors. C Rush, Annu Rev Phytopathol 2003 41 567 592 10.1146/annurev.phyto.41.052002. 095705 14527334 (Pubitemid 37399693)
6. Production and Pathogenicity of Isolates of Beet Necrotic Yellow Vein Virus with Different Numbers of RNA Components. T Tamada Y Shirako H Abe M Saito T Kiguchi T Harada, J Gen Virol 1989 70 3399 3409 10.1099/0022-1317-70-12-3399 (Pubitemid 20044079)
7. Progress towards the understanding and control of sugar beet rhizomania disease. G McGrann M Grimmer E Mutasa-Göttgens M Stevens, Molecular plant pathology 2009 10 129 141 10.1111/j.1364-3703.2008.00514.x 19161359
8. Mapping functions on the multipartite genome of beet necrotic yellow vein virus. K Richards T Tamada, Annu Rev Phytopathol 1992 30 291 313 10.1146/annurev.py.30.090192.001451
9. Identification, subcellular localization and some properties of a cysteine-rich suppressor of gene silencing encoded by peanut clump virus. P Dunoyer S Pfeffer C Fritsch O Hemmer O Voinnet K Richards, Plant J 2002 29 555 567 10.1046/j.0960-7412.2001.01242.x 11874569 (Pubitemid 34248748)
10. Two virus-encoded RNA silencing suppressors, P14 of Beet necrotic yellow vein virus and S6 ofRice black streak dwarf virus. L Zhang Z Wang X Wang D Li C Han Y Zhai J Yu, Chinese Science Bulletin 2005 50 305 310 (Pubitemid 44543451)
11. Evidence that RNA silencing-mediated resistance to beet necrotic yellow vein virus is less effective in roots than in leaves. IB Andika H Kondo T Tamada, Mol Plant Microbe Interact 2005 18 194 204 10.1094/MPMI-18-0194 15782633 (Pubitemid 40263614)
12. Cell-to-cell movement of beet necrotic yellow vein virus: I. Heterologous complementation experiments provide evidence for specific interactions among the triple gene block proteins. E Lauber C Bleykasten-Grossh. M Erhardt S Bouzoubaa G Jonard K Richards H Guilley, Mol Plant Microbe Interact 1998 11 618 625 10.1094/MPMI.1998.11.7.618 9650295 (Pubitemid 28417751)
13. In vitro synthesis of biologically active beet necrotic yellow vein virus RNA. L Quillet H Guilley G Jonard K Richards, Virology 1989 172 293 301 10.1016/0042-6822(89)90131-1 2773320
14. Vascular movement of beet necrotic yellow vein virus in Beta macrocarpa is probably dependent on an RNA 3 sequence domain rather than a gene product. E Lauber H Guilley T Tamada K Richards G Jonard, J Gen Virol 1998 79 385 393 9472625 (Pubitemid 28048445)
15. Pathogenesis of beet necrotic yellow vein virus. I Jupin T Tamada K Richards, Semin Virol 1991 2 121 129
16. Identification of amino acids of the beet necrotic yellow vein virus p25 protein required for induction of the resistance response in leaves of Beta vulgaris plants. S Chiba M Miyanishi IB Andika H Kondo T Tamada, J Gen Virol 2008 89 1314 1323 10.1099/vir.0.83624-0 18420811
17. Two proteins encoded by beet necrotic yellow vein virus RNA 3 influence symptom phenotype on leaves. I Jupin H Guilley K Richards G Jonard, EMBO J 1992 11 479 488 1537331
18. Sequence variation within Beet necrotic yellow vein virus p25 protein influences its oligomerization and isolate pathogenicity on Tetragonia expansa. E Klein D Link A Schirmer M Erhardt D Gilmer, Virus Res 2007 126 53 61 10.1016/j.virusres.2006.12.019 17350709 (Pubitemid 46726695)
19. Evidence that Beet Necrotic Yellow Vein Virus RNA-4 Is Essential for Efficient Transmission by the Fungus Polymyxa betae. T Tamada H Abe, J Gen Virol 1989 70 3391 3398 10.1099/0022-1317-70-12-3391 (Pubitemid 20044078)
20. RNA4-encoded p31 of beet necrotic yellow vein virus is involved in efficient vector transmission, symptom severity and silencing suppression in roots. MD Rahim IB Andika C Han H Kondo T Tamada, J Gen Virol 2007 88 1611 1619 10.1099/vir.0.82720-0 17412994 (Pubitemid 46723247)
21. Detection and characterization of a distinct type of beet necrotic yellow vein virus RNA 5 in a sugarbeet growing area in Europe. R Koenig A Haeberle U Commandeur, Arch Virol 1997 142 1499 1504 10.1007/s007050050176 9267459 (Pubitemid 27309172)
22. The first 17 amino acids of the beet necrotic yellow vein virus RNA-5-encoded p26 protein are sufficient to activate transcription in a yeast one-hybrid system. L Covelli E Klein D Gilmer, Arch Virol 2009 154 347 351 10.1007/s00705-008-0306-4 19137435
23. Functional characterization of the Beet necrotic yellow vein virus RNA-5-encoded p26 protein: evidence for structural pathogenicity determinants. D Link L Schmidlin A Schirmer E Klein M Erhardt A Geldreich O Lemaire D Gilmer, J Gen Virol 2005 86 2115 2125 10.1099/vir.0.80937-0 15958690 (Pubitemid 40916394)
24. Breeding for Multiple Disease Resistance in Sugarbeet: Registration of FC220 and FC221. L Panella RT Lewellen LE Hanson, J Plant Registrations 2008 2 146 155 10.3198/jpr2007.12.0665crg
25. Evidence for three groups of sequence variants of beet necrotic yellow vein virus RNA 5. M Miyanishi T Kusume M Saito T Tamada, Arch Virol 1999 144 879 892 10.1007/s007050050553 10416372 (Pubitemid 29284853)
26. Detection and nucleotide analysis of RNA5 of beet necrotic yellow vein virus isolated in China. L Dawei Y Jialin H Chenggui L Tao Q Shucai R Koenig L Yi, Chinese journal of biotechnology 1999 15 253 11037951
27. Nucleotide sequence analysis of RNA-5 of five isolates of beet necrotic yellow vein virus and the identity of a deletion mutant. T Kiguchi M Saito T Tamada, J Gen Virol 1996 77 575 580 10.1099/0022-1317-77-4-575 8627244 (Pubitemid 26121788)
28. Evidence that the 75 K readthrough protein of beet necrotic yellow vein virus RNA-2 is essential for transmission by the fungus Polymyxa betae. T Tamada T Kusume, J Gen Virol 1991 72 1497 1504 10.1099/0022-1317-72-7-1497 1856688
29. Nucleotide Sequence Analysis of RNA-3 and RNA-4 of Beet Necrotic Yellow Vein Virus, Isolates F2 and G1. S Bouzoubaa H Guilley G Jonard K Richards C Putz, J Gen Virol 1985 66 1553 1564 10.1099/0022-1317-66-7-1553 (Pubitemid 15070396)
30. Uniform RNA Patterns of Beet Necrotic Yellow Vein Virus in Sugarbeet Roots, but Not in Leaves from Several Plant Species. R Koenig W Burgermeister H Weich W Sebald C Kothe, J Gen Virol 1986 67 2043 2046 10.1099/0022-1317-67-9- 2043
31. Beet necrotic yellow vein virus: different isolates are serologically similar but differ in RNA composition. M Kuszala V Ziegler S Bouzoubaa K Richards C Putz H Guilley G Jonard, Annals of Applied Biology 1986 109 155 162 10.1111/j.1744-7348.1986.tb03194.x
32. Diversity of the RNAs in thirteen isolates of beet necrotic yellow vein virus in Chenopodium quinoa detected by means of cloned cDNAs. W Burgermeister R Koenig H Weich W Sebald D Lesemann, Phytopathologische Zeitschrift 1986 115 229 242 10.1111/j.1439-0434.1986.tb00881.x
33. Shortened forms of beet necrotic yellow vein virus RNA-3 and -4: internal deletions and a subgenomic RNA. S Bouzoubaa U Niesbach-Klosgen I Jupin H Guilley K Richards G Jonard, J Gen Virol 1991 72 259 266 10.1099/0022-1317-72-2- 259 1993870
34. Artificial defective interfering RNAs derived from RNA 2 of beet necrotic yellow vein virus. A Hehn S Bouzoubaa G Jonard H Guilley K Richards, Arch Virol 1994 135 143 151 10.1007/BF01309771 8198439 (Pubitemid 2059510)
35. RNA 3 deletion mutants of beet necrotic yellow vein virus do not cause rhizomania disease in sugar beets. T Tamada H Uchino T Kusume M Saito, Phytopathology 1999 89 1000 1006 10.1094/PHYTO.1999.89.11.1000 18944654 (Pubitemid 29514849)
36. Nucleo-cytoplasmic shuttling of the beet necrotic yellow vein virus RNA-3-encoded p25 protein. G Vetter J-M Hily E Klein L Schmidlin M Haas T Merkle D Gilmer, J Gen Virol 2004 85 2459 2469 10.1099/vir.0.80142-0 15269388 (Pubitemid 39162619)
37. Effect of the RNA5 component on pathogenicity of beet necrotic yellow vein virus. T Liu C Han D Li Z Cai J Yu Y Liu, Chinese Science Bulletin 2003 48 796 799 (Pubitemid 44561496)
38. Analysis of nucleotide sequences and multimeric forms of a novel satellite RNA associated with beet black scorch virus. L Guo Y Cao D Li S Niu Z Cai C Han Y Zhai J Yu, J Virol 2005 79 3664 10.1128/JVI.79.6.3664-3674.2005 15731260