Comparison of buccal and blood-derived canine DNA, either native or whole genome amplified, for array-based genome-wide association studies

BMC Research Notes

Volumn 4, Issue , 2011, Pages

  Rincon, Gonzalo ^a   Tengvall, Katarina ^b   Belanger, Janelle M ^a   Lagoutte, Laetitia ^c   Medrano, Juan F ^a   André, Catherine ^c   Thomas, Anne ^d   Lawley, Cynthia Taylor ^e   Hansen, Mark S T ^e   Lindblad Toh, Kerstin ^b,f   Oberbauer, Anita M ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b UPPSALA UNIVERSITY   (Sweden)

^c UNIVERSITÉ DE RENNES 1   (France)

^d Antagene Animal Genetics Laboratory   (France)

^e ILLUMINA INC   (United States)

^f BROAD INSTITUTE OF MIT AND HARVARD   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CANIS FAMILIARIS;

EID: 79959665046     PISSN: None     EISSN: 17560500     Source Type: Journal    
DOI: 10.1186/1756-0500-4-226     Document Type: Article

References (7)

1. Array-based whole-genome survey of dog saliva DNA yields high quality SNP data. JS Yokoyama CA Erdman SP Hamilton, PLoS One 2010 5 10809 10.1371/journal.pone.0010809 20520842
2. Genome-wide association study of CNVs in 16,000 cases of eight common diseases and 3,000 shared controls. N Craddock ME Hurles N Cardin RD Pearson V Plagnol S Robson D Vukcevic C Barnes DF Conrad E Giannoulatou,, et al. Nature 2010 464 713 720 10.1038/nature08979 20360734
3. Alternatives to blood as a source of DNA for large-scale scanning studies of canine genome linkages. AM Oberbauer DI Grossman ML Eggleston DN Irion AL Schaffer NC Pedersen JM Belanger, Vet Res Commun 2003 27 27 38 10.1023/A:1022006606796 12625401 (Pubitemid 36240392)
4. PLINK: a tool set for whole-genome association and population-based linkage analyses. S Purcell B Neale K Todd-Brown L Thomas MA Ferreira D Bender J Maller P Sklar PI de Bakker MJ Daly PC Sham, Am J Hum Genet 2007 81 559 575 10.1086/519795 17701901 (Pubitemid 47330214)
5. Large-scale SNP genotyping with canine buccal swab DNA. ML Chang RL Terrill MM Bautista EJ Carlson DJ Dyer KL Overall SP Hamilton, J Hered 2007 98 428 437 10.1093/jhered/esm044 17602178 (Pubitemid 47357587)
6. Quality assessment of buccal versus blood genomic DNA using the Affymetrix 500 K GeneChip. JG Woo G Sun M Haverbusch S Indugula LJ Martin JP Broderick R Deka D Woo, BMC Genet 2007 8 79 17996058
7. Quality, Yield, Performance and Bacterial Content of DNA from Canine Saliva Collected and Purified using Oragene ANIMAL. RM Iwasiow CMP James J Niles, DNA Genotek 2009 PD-WP-014