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Volumn 27, Issue 13, 2011, Pages 1876-1877

Parmigene-a parallel R package for mutual information estimation and gene network reconstruction

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; B LYMPHOCYTE; COMPUTER PROGRAM; GENE EXPRESSION PROFILING; GENE REGULATORY NETWORK; HUMAN; IMAGE PROCESSING; METABOLISM; ONCOGENE MYC; REGRESSION ANALYSIS;

EID: 79959425839     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btr274     Document Type: Article
Times cited : (71)

References (9)
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    • Estimating mutual information
    • Kraskov,A. et al. (2004) Estimating mutual information. Phys. Rev. E, 69, 066138.
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    • Kraskov, A.1
  • 5
    • 33947305781 scopus 로고    scopus 로고
    • Aracne: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context
    • Margolin,A. et al. (2006) Aracne: an algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context. BMC Bioinformatics, 7 (Suppl. 1), S7.
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    • Margolin, A.1
  • 6
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    • minet: a r/bioconductor package for inferring large transcriptional networks using mutual information
    • Meyer,P. et al. (2008) minet: a r/bioconductor package for inferring large transcriptional networks using mutual information. BMC Bioinformatics, 9, 461.
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    • Meyer, P.1
  • 7
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    • Fast calculation of pairwise mutual information for gene regulatory network reconstruction
    • Qiu,P. et al. (2009) Fast calculation of pairwise mutual information for gene regulatory network reconstruction. Comput. Methods Programs Biomed., 94, 177-180.
    • (2009) Comput. Methods Programs Biomed. , vol.94 , pp. 177-180
    • Qiu, P.1
  • 8
    • 15944364151 scopus 로고    scopus 로고
    • An empirical Bayes approach to inferring large-scale gene association networks
    • Schafer,J. and Strimmer,K. (2005) An empirical Bayes approach to inferring large-scale gene association networks. Bioinformatics, 21, 754-764.
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  • 9
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    • Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks
    • Werhli,A.V. et al. (2006) Comparative evaluation of reverse engineering gene regulatory networks with relevance networks, graphical gaussian models and bayesian networks. Bioinformatics, 22, 2523-2531.
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    • Werhli, A.V.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.